BLASTX nr result

ID: Glycyrrhiza23_contig00002913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002913
         (1591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   838   0.0  
ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   834   0.0  
ref|XP_003609133.1| ATP-dependent RNA helicase has1 [Medicago tr...   793   0.0  
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   760   0.0  
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              758   0.0  

>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max]
          Length = 575

 Score =  838 bits (2164), Expect = 0.0
 Identities = 420/463 (90%), Positives = 433/463 (93%)
 Frame = +1

Query: 1    MTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLVPAVELLYNVKFTPRSGAGVIIICPTR 180
            MTQIQARAIPPLL GKDVLGAARTGSGKTLAFL+PAVELLYNVKFTPR+GAGVI+ICPTR
Sbjct: 113  MTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYNVKFTPRNGAGVIVICPTR 172

Query: 181  ELAIQTHAVATELLKYHSQTLGLVIGGSARKAEAEHISKGINLLVATPGRLLDHLQNTKR 360
            ELAIQTHAVA ELLKYHSQTLGLVIGGSARK EAE I+KGINLLV TPGRLLDHLQNTK 
Sbjct: 173  ELAIQTHAVAKELLKYHSQTLGLVIGGSARKIEAERIAKGINLLVGTPGRLLDHLQNTKG 232

Query: 361  FIYNNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 540
            FIY NLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT
Sbjct: 233  FIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 292

Query: 541  TPIYIDVDDGRKKVTNEGLLQGYVIVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 720
            TPIYIDVDDGR KVTNEGLLQGYV+VPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH
Sbjct: 293  TPIYIDVDDGRTKVTNEGLLQGYVVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 352

Query: 721  ADILNLIHLNCSSIHGKQKQQTRTATFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 900
            ADILNLI LNCSSIHGKQKQQ+RT TFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD
Sbjct: 353  ADILNLIQLNCSSIHGKQKQQSRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 412

Query: 901  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 1080
            PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV
Sbjct: 413  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 472

Query: 1081 QSHMENLVANNYFLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFLXXXXX 1260
            QSH+ENLV NN++LNKMAKEAYRSYILAYNSHSMKDIFN+H LDLQAVA+SFCF      
Sbjct: 473  QSHLENLVVNNFYLNKMAKEAYRSYILAYNSHSMKDIFNIHHLDLQAVASSFCFSNPPNV 532

Query: 1261 XXXXXXXKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKRQFVRH 1389
                   KQR KMRKVDGSRHGFS  NPYGK  A+DKRQFVR+
Sbjct: 533  SLNINSSKQRNKMRKVDGSRHGFSGDNPYGKRNADDKRQFVRY 575


>ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max]
          Length = 572

 Score =  834 bits (2154), Expect = 0.0
 Identities = 418/463 (90%), Positives = 433/463 (93%)
 Frame = +1

Query: 1    MTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLVPAVELLYNVKFTPRSGAGVIIICPTR 180
            MTQIQARAIPPLL GKDVLGAARTGSGKTLAFL+PA+ELLYNVKFTPR+GAGVI+ICPTR
Sbjct: 110  MTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPALELLYNVKFTPRNGAGVIVICPTR 169

Query: 181  ELAIQTHAVATELLKYHSQTLGLVIGGSARKAEAEHISKGINLLVATPGRLLDHLQNTKR 360
            ELAIQTHAVA ELLKYHSQTLGLVIGGSARK EAE ++KGINLLV TPGRLLDHLQNTK 
Sbjct: 170  ELAIQTHAVAKELLKYHSQTLGLVIGGSARKIEAERLAKGINLLVGTPGRLLDHLQNTKG 229

Query: 361  FIYNNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 540
            F+Y NLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT
Sbjct: 230  FMYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 289

Query: 541  TPIYIDVDDGRKKVTNEGLLQGYVIVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 720
            TPIYIDVDDGR KVTNEGLLQGYV+VPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH
Sbjct: 290  TPIYIDVDDGRTKVTNEGLLQGYVVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 349

Query: 721  ADILNLIHLNCSSIHGKQKQQTRTATFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 900
            ADILNLI LNCSSIHGKQKQQTRT TFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD
Sbjct: 350  ADILNLIQLNCSSIHGKQKQQTRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 409

Query: 901  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 1080
            PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFL YLKAAKVPVKEYAYDEKKVANV
Sbjct: 410  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLCYLKAAKVPVKEYAYDEKKVANV 469

Query: 1081 QSHMENLVANNYFLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFLXXXXX 1260
            QSH+ENLV NN++LNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVA+SF F      
Sbjct: 470  QSHLENLVVNNFYLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFSFSNPPNV 529

Query: 1261 XXXXXXXKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKRQFVRH 1389
                   KQR KMRKVDGSRHGF+ +NPYGK  A+DKRQFVRH
Sbjct: 530  SLNINSSKQRNKMRKVDGSRHGFNDNNPYGKKNADDKRQFVRH 572


>ref|XP_003609133.1| ATP-dependent RNA helicase has1 [Medicago truncatula]
            gi|355510188|gb|AES91330.1| ATP-dependent RNA helicase
            has1 [Medicago truncatula]
          Length = 624

 Score =  793 bits (2049), Expect = 0.0
 Identities = 398/476 (83%), Positives = 432/476 (90%), Gaps = 2/476 (0%)
 Frame = +1

Query: 1    MTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLVPAVELLYNVKFTPRSGAGVIIICPTR 180
            +TQIQARAIPPLLSGKDVLGAARTGSGKTLAFL+PAVELL+ +KF  RSG GV+IICPTR
Sbjct: 119  LTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSGTGVVIICPTR 178

Query: 181  ELAIQTHAVATELLKYH--SQTLGLVIGGSARKAEAEHISKGINLLVATPGRLLDHLQNT 354
            ELAIQTH VA +LLK+H  SQTLGLVIGGSAR+ EAE ++KGIN++VATPGRLLDHLQNT
Sbjct: 179  ELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRLLDHLQNT 238

Query: 355  KRFIYNNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSF 534
            KRFIYNNLKCL+IDEADRILEANFE+E+KQIIK+LPKNRQTALFSATQTKKVEDLARLSF
Sbjct: 239  KRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNRQTALFSATQTKKVEDLARLSF 298

Query: 535  QTTPIYIDVDDGRKKVTNEGLLQGYVIVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVK 714
            QTTPIYIDVDDGRKKVTNEGLLQGYV+VPCAKRF+VLYSFLKRH+SKKVMVFFSSCNSVK
Sbjct: 299  QTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSKKVMVFFSSCNSVK 358

Query: 715  FHADILNLIHLNCSSIHGKQKQQTRTATFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQ 894
            FHADI N IHL+CSSI+GKQKQQTRT TF DFC+AEKGILLCTDVAARGLDIP+VDWI+Q
Sbjct: 359  FHADIFNHIHLHCSSIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSVDWILQ 418

Query: 895  YDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVA 1074
            YDPPDEPKEYIHRVGRTARGE GKGNALLFLIPEELQFLRYLK AKVPVKEYAYDEKKVA
Sbjct: 419  YDPPDEPKEYIHRVGRTARGEDGKGNALLFLIPEELQFLRYLKEAKVPVKEYAYDEKKVA 478

Query: 1075 NVQSHMENLVANNYFLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFLXXX 1254
            N+QSH+ENLVA NYFLNKMAKEAY+SYILAYNSHS KDIF+V RLD+QAVAASFCF    
Sbjct: 479  NIQSHLENLVAENYFLNKMAKEAYKSYILAYNSHSSKDIFSVQRLDMQAVAASFCFSNPP 538

Query: 1255 XXXXXXXXXKQRKKMRKVDGSRHGFSQSNPYGKGLAEDKRQFVRH*QQ*SCHGFIE 1422
                     KQRKK R+VDGSRHGF+ +NPYGK  A+DKRQFV      SCH  +E
Sbjct: 539  NVSLNINMSKQRKKTRRVDGSRHGFNPNNPYGKRNADDKRQFV------SCHPPLE 588


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 590

 Score =  760 bits (1962), Expect = 0.0
 Identities = 383/464 (82%), Positives = 410/464 (88%), Gaps = 1/464 (0%)
 Frame = +1

Query: 1    MTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLVPAVELLYNVKFTPRSGAGVIIICPTR 180
            +TQIQARAIPPLL GKDVLGAARTGSGKTLAFL+PAVELLYNV F PR+G GV++ICPTR
Sbjct: 127  LTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLYNVHFAPRNGTGVVVICPTR 186

Query: 181  ELAIQTHAVATELLKYHSQTLGLVIGGSARKAEAEHISKGINLLVATPGRLLDHLQNTKR 360
            ELAIQTHAVA +LLKYHSQTLGLVIGGSARK EAE I KG+NLLVATPGRLLDHLQNTK 
Sbjct: 187  ELAIQTHAVAKDLLKYHSQTLGLVIGGSARKGEAERIVKGVNLLVATPGRLLDHLQNTKG 246

Query: 361  FIYNNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 540
            FIY NLKCLMIDEADRILEANFEEEMKQIIKILPK+RQTALFSATQTKKVEDLARLSFQ 
Sbjct: 247  FIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQI 306

Query: 541  TPIYIDVDDGRKKVTNEGLLQGYVIVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 720
            TP+YIDVDDGR KVTNEGL QGY +V  AKRFI+LYSFLKR+ SKKVMVFFSSCNSVKFH
Sbjct: 307  TPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFH 366

Query: 721  ADILNLIHLNCSSIHGKQKQQTRTATFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 900
            +++L  I + C  IHGKQKQQ RT TFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD
Sbjct: 367  SELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 426

Query: 901  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 1080
            PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEY +D KK+ANV
Sbjct: 427  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDVKKLANV 486

Query: 1081 QSHMENLVANNYFLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFLXXXXX 1260
            QSH+E LVANNY+LNK AK+AYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCF      
Sbjct: 487  QSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFSCPPKV 546

Query: 1261 XXXXXXXKQRKKMRKVDGSRHGFSQSNPYGKGLAEDK-RQFVRH 1389
                     + + +   GSR+GFS+SNPYG+   ED  RQFVRH
Sbjct: 547  NLNIDSNASKFRKKAHKGSRNGFSESNPYGRQRDEDNTRQFVRH 590


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  758 bits (1956), Expect = 0.0
 Identities = 379/466 (81%), Positives = 416/466 (89%), Gaps = 3/466 (0%)
 Frame = +1

Query: 1    MTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLVPAVELLYNVKFTPRSGAGVIIICPTR 180
            MTQIQARAIPPLL GKDVLGAARTGSGKTLAFL+PAVELLY++ F PR+G GV++ICPTR
Sbjct: 27   MTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHISFMPRNGTGVVVICPTR 86

Query: 181  ELAIQTHAVATELLKYHSQTLGLVIGGSARKAEAEHISKGINLLVATPGRLLDHLQNTKR 360
            ELAIQTHAVA +LLKYH+QTLGLVIGGSAR+ EAE ++KG NLLVATPGRLLDHLQNTK 
Sbjct: 87   ELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEAERLAKGANLLVATPGRLLDHLQNTKG 146

Query: 361  FIYNNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQT 540
            FIY NLKCL+IDEADRILEANFEEEMKQIIK+LPK RQTALFSATQTKKVEDLARLSFQT
Sbjct: 147  FIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQT 206

Query: 541  TPIYIDVDDGRKKVTNEGLLQGYVIVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFH 720
            TP+YIDVDDGR KVTNEGL QGY +VP AKRF++LYSFLKR+ SKKVMVFFSSCNSVK+H
Sbjct: 207  TPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVLLYSFLKRNLSKKVMVFFSSCNSVKYH 266

Query: 721  ADILNLIHLNCSSIHGKQKQQTRTATFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 900
            +++L  I ++C  IHGKQKQQ RT+TFFDFCKAEKGILLCTDVAARGLDIP VDWIVQYD
Sbjct: 267  SELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYD 326

Query: 901  PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 1080
            PPDEPKEYIHRVGRTARGEG KGNALLFLIPEELQFLRYLKAAKVPVKEY YD KK+ANV
Sbjct: 327  PPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANV 386

Query: 1081 QSHMENLVANNYFLNKMAKEAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFL--XXX 1254
            QSH+E LV+NNY+LNK AK+AYRSYILAYNSHSMKDIFNVHRLDLQAVA+SFCF      
Sbjct: 387  QSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPPKV 446

Query: 1255 XXXXXXXXXKQRKKMRKVDGSRHGFSQSNPYGKGLA-EDKRQFVRH 1389
                     K RKK  KV+GSR+GFS+SNPYG+    +DKRQFVR+
Sbjct: 447  NLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 492


Top