BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002878
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF22879.1| RNA-binding protein [Glycine max]                      333   1e-93
ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like...   333   1e-93
ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   323   3e-91
gb|AFK42498.1| unknown [Medicago truncatula]                          319   1e-89
gb|AFK47384.1| unknown [Lotus japonicus]                              316   2e-88

>gb|ACF22879.1| RNA-binding protein [Glycine max]
          Length = 302

 Score =  333 bits (855), Expect(2) = 1e-93
 Identities = 172/223 (77%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
 Frame = -1

Query: 972 AAWENQGEPKWGNEDDDETQSEGEVVEDGNFGEVGFAEP-SEDLKIFVGNLPFDVDSEKL 796
           AAWENQG+  WG E+       G+ +EDG  GE GFAE  +E++KIFVGNLPFD DSEKL
Sbjct: 89  AAWENQGDTAWGTEEG------GDDIEDG--GEGGFAEEEAEEVKIFVGNLPFDFDSEKL 140

Query: 795 AMLFEQSGTVEVAEVIYNRATDRSRGFGFVTMSTVEEVEKAVDRFSGYELDGRVLTVNKA 616
           A LFEQ+GTVEVAEVIYNRATDRSRGFGFVTMST+EE+EKAV  FSGYEL+GRVLTVNKA
Sbjct: 141 ASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVNKA 200

Query: 615 APRGSRPERPPRTSDSALRVYVGNLPWDIDNARLEQIFSEHGKVESARVVYDRETGRSRG 436
           AP+G++PERPPR   S  RVYVGNLPWD+DN+RLEQIFSEHGKVE ARVVYDRETGRSRG
Sbjct: 201 APKGAQPERPPRPPQS-FRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRG 259

Query: 435 FGFVAMSSETETNDAIAALDGQSLDGRTIRVSVAEERPRRSSF 307
           FGFV MSSET+ NDAIAALDGQSLDGR IRV+VA +RP+ SSF
Sbjct: 260 FGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAAQRPKPSSF 302



 Score = 37.7 bits (86), Expect(2) = 1e-93
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -3

Query: 1138 TRKTTHHSSPLTFVAQTSDWAQQ 1070
            T KTT HSS LTFVAQTS WA++
Sbjct: 61   TTKTTRHSSLLTFVAQTSGWAKE 83


>ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
           gi|255645622|gb|ACU23305.1| unknown [Glycine max]
          Length = 300

 Score =  333 bits (855), Expect(2) = 1e-93
 Identities = 172/223 (77%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
 Frame = -1

Query: 972 AAWENQGEPKWGNEDDDETQSEGEVVEDGNFGEVGFAEP-SEDLKIFVGNLPFDVDSEKL 796
           AAWENQG+  WG E+       G+ +EDG  GE GFAE  +E++KIFVGNLPFD DSEKL
Sbjct: 87  AAWENQGDTAWGTEEG------GDDIEDG--GEGGFAEEEAEEVKIFVGNLPFDFDSEKL 138

Query: 795 AMLFEQSGTVEVAEVIYNRATDRSRGFGFVTMSTVEEVEKAVDRFSGYELDGRVLTVNKA 616
           A LFEQ+GTVEVAEVIYNRATDRSRGFGFVTMST+EE+EKAV  FSGYEL+GRVLTVNKA
Sbjct: 139 ASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVNKA 198

Query: 615 APRGSRPERPPRTSDSALRVYVGNLPWDIDNARLEQIFSEHGKVESARVVYDRETGRSRG 436
           AP+G++PERPPR   S  RVYVGNLPWD+DN+RLEQIFSEHGKVE ARVVYDRETGRSRG
Sbjct: 199 APKGAQPERPPRPPQS-FRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRG 257

Query: 435 FGFVAMSSETETNDAIAALDGQSLDGRTIRVSVAEERPRRSSF 307
           FGFV MSSET+ NDAIAALDGQSLDGR IRV+VA +RP+ SSF
Sbjct: 258 FGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAAQRPKPSSF 300



 Score = 37.7 bits (86), Expect(2) = 1e-93
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -3

Query: 1138 TRKTTHHSSPLTFVAQTSDWAQQ 1070
            T KTT HSS LTFVAQTS WA++
Sbjct: 59   TTKTTRHSSLLTFVAQTSGWAKE 81


>ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 299

 Score =  323 bits (827), Expect(2) = 3e-91
 Identities = 164/224 (73%), Positives = 187/224 (83%), Gaps = 3/224 (1%)
 Frame = -1

Query: 969 AWENQGEPKWGNEDDDETQSEGEVVEDGNFGEVGFAEPSEDLKIFVGNLPFDVDSEKLAM 790
           +WENQG+  WG E+             G   E GFAE +E+ KIFVGNLPFD+DSE LA 
Sbjct: 89  SWENQGDTAWGTEE-------------GGHEEGGFAEKAEEDKIFVGNLPFDIDSENLAS 135

Query: 789 LFEQSGTVEVAEVIYNRATDRSRGFGFVTMSTVEEVEKAVDRFSGYELDGRVLTVNKAAP 610
           LF Q+GTVEVAEVIYNRATDRSRGFGFVTMST+EE++KAV+ FSGYEL+GRVLTVNKAAP
Sbjct: 136 LFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGYELNGRVLTVNKAAP 195

Query: 609 RGSRPERPPR---TSDSALRVYVGNLPWDIDNARLEQIFSEHGKVESARVVYDRETGRSR 439
           +G++PERPPR   +  S LRVYVGNLPW++D+ARLEQIFSEHGKVE ARVVYDRETGRSR
Sbjct: 196 KGAQPERPPRPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGRSR 255

Query: 438 GFGFVAMSSETETNDAIAALDGQSLDGRTIRVSVAEERPRRSSF 307
           GFGFV MSSET+ NDAIAALDGQSLDGR IRV+VA++RP RSSF
Sbjct: 256 GFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAQDRPSRSSF 299



 Score = 40.4 bits (93), Expect(2) = 3e-91
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 1138 TRKTTHHSSPLTFVAQTSDWAQQ 1070
            T KTT HSS LTFVAQTSDWA++
Sbjct: 60   TTKTTRHSSLLTFVAQTSDWAKE 82


>gb|AFK42498.1| unknown [Medicago truncatula]
          Length = 300

 Score =  319 bits (818), Expect(2) = 1e-89
 Identities = 162/221 (73%), Positives = 179/221 (80%)
 Frame = -1

Query: 975 GAAWENQGEPKWGNEDDDETQSEGEVVEDGNFGEVGFAEPSEDLKIFVGNLPFDVDSEKL 796
           GA WENQ +  W  E +     E EV          F EPSEDLKIFVGNLPFDVDSEKL
Sbjct: 87  GATWENQADATWVGETESNENEEVEVAS--------FEEPSEDLKIFVGNLPFDVDSEKL 138

Query: 795 AMLFEQSGTVEVAEVIYNRATDRSRGFGFVTMSTVEEVEKAVDRFSGYELDGRVLTVNKA 616
           A LFEQSGTVE+AEVIYNR TDRSRGFGFVTMST EEVE+AV++FSG+ELDGR+LTVN A
Sbjct: 139 AQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAVNKFSGFELDGRLLTVNNA 198

Query: 615 APRGSRPERPPRTSDSALRVYVGNLPWDIDNARLEQIFSEHGKVESARVVYDRETGRSRG 436
           APRG+   R PRT +S LR YVGNLPWD+DN+ LEQ+FSEHGKVESA+VVYDRETGR RG
Sbjct: 199 APRGTPRLRQPRTFNSGLRAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRLRG 258

Query: 435 FGFVAMSSETETNDAIAALDGQSLDGRTIRVSVAEERPRRS 313
           FGFV MS+E E NDAIAALDGQS +GR IRV+VAEERPRRS
Sbjct: 259 FGFVTMSNEAEMNDAIAALDGQSFNGRAIRVNVAEERPRRS 299



 Score = 38.1 bits (87), Expect(2) = 1e-89
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -3

Query: 1138 TRKTTHHSSPLTFVAQTSDWAQQ 1070
            +++ T HSS +TFVAQTSDWAQQ
Sbjct: 59   SKRRTRHSSLVTFVAQTSDWAQQ 81


>gb|AFK47384.1| unknown [Lotus japonicus]
          Length = 307

 Score =  316 bits (809), Expect(2) = 2e-88
 Identities = 164/231 (70%), Positives = 186/231 (80%), Gaps = 8/231 (3%)
 Frame = -1

Query: 975 GAAWENQGEPKWGNEDDDETQSEGEVVEDGNFGEVGFAEPSEDLKIFVGNLPFDVDSEKL 796
           GAAWEN+GEP W NED DET+   EVV          AEPSEDLKIFVGNLP+DV+SE L
Sbjct: 85  GAAWENEGEPTWANEDSDETEGGEEVVAS--------AEPSEDLKIFVGNLPWDVESENL 136

Query: 795 AMLFEQSGTVEVAEVIYNRATDRSRGFGFVTMSTVEEVEKAVDRFSGYELDGRVLTVNKA 616
           AMLFE++G+VE AEVIYN+AT++SRGFGFV MST E++EKA+++FSGYELDGRVLTVNKA
Sbjct: 137 AMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKALNKFSGYELDGRVLTVNKA 196

Query: 615 APRGSRPERPPRT-------SDSALRVYVGNLPWDIDNARLEQIFSEHGKVESARVVYDR 457
            P+ +RPERPPRT        DS L VYVGNLPW +D ARLE+IF EHG VE+AR+V DR
Sbjct: 197 TPKEARPERPPRTFGSGSGSRDSGLSVYVGNLPWSVDAARLEEIFREHGNVENARIVMDR 256

Query: 456 ETGRSRGFGFVAMSSETETNDAIAALDGQSLDGRTIRVSVAEERP-RRSSF 307
           ETGRSRGFGFV MSSE + N AIAALDGQSLDGRTIRVSVAE R   RSSF
Sbjct: 257 ETGRSRGFGFVTMSSEADINGAIAALDGQSLDGRTIRVSVAEGRSGGRSSF 307



 Score = 37.7 bits (86), Expect(2) = 2e-88
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = -3

Query: 1129 TTHHSSPLTFVAQTSDWAQQ 1070
            TTH S  LTFVAQTSDWAQQ
Sbjct: 61   TTHRSPLLTFVAQTSDWAQQ 80