BLASTX nr result

ID: Glycyrrhiza23_contig00002798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002798
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Gly...   239   1e-61
ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Gly...   237   8e-61
ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vit...   154   7e-36
ref|XP_003619132.1| F-box family protein [Medicago truncatula] g...   142   3e-32
ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cuc...   142   4e-32

>ref|XP_003549121.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 372

 Score =  239 bits (611), Expect = 1e-61
 Identities = 118/146 (80%), Positives = 132/146 (90%)
 Frame = -2

Query: 438 MSEVRNKMDFIQLLGPDMSIKILTHLDDPCDLVRVSAVSSSWHRFVIENGLCKQLCLKMF 259
           MSEVRNK+DFIQLLGPDMSIKILTHLDDPCDL+RVS+VSSSWHRFVIE+GLCKQLCLKMF
Sbjct: 1   MSEVRNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMF 60

Query: 258 PEIFSVARSIEVDNMIEPEPITNMLGSYTNWECLKRNHKVYAVLAFGLTPVRKSCISKAI 79
           PEI  VA  IE+DN+I  EP++N LGSY +WE  KRNH+VYA LA GLTP+RK+CISKAI
Sbjct: 61  PEISGVAHIIELDNII--EPLSNTLGSYVSWESHKRNHRVYAFLASGLTPMRKNCISKAI 118

Query: 78  SATSTDNYPEESILNTLEPRDRTENR 1
           SA+STDNYPEESIL+TLEP DRTE R
Sbjct: 119 SASSTDNYPEESILHTLEPGDRTEYR 144


>ref|XP_003534016.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 374

 Score =  237 bits (604), Expect = 8e-61
 Identities = 116/146 (79%), Positives = 130/146 (89%)
 Frame = -2

Query: 438 MSEVRNKMDFIQLLGPDMSIKILTHLDDPCDLVRVSAVSSSWHRFVIENGLCKQLCLKMF 259
           MSEV+NK+DFIQLLGPDMSIKILTHLDDPCDL+RVSAVSSSWHRFVIE GLCKQLCLKMF
Sbjct: 1   MSEVKNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMF 60

Query: 258 PEIFSVARSIEVDNMIEPEPITNMLGSYTNWECLKRNHKVYAVLAFGLTPVRKSCISKAI 79
           PEI  VA  +E+DN+I  EP+ N LGSY NWE LKR H+VYA LA GLTP+RK+CISK+I
Sbjct: 61  PEISGVAHIVELDNII--EPLINTLGSYVNWESLKRIHRVYAFLASGLTPMRKNCISKSI 118

Query: 78  SATSTDNYPEESILNTLEPRDRTENR 1
           SA+STDNYPEESIL+TLEP DRT+ R
Sbjct: 119 SASSTDNYPEESILHTLEPGDRTQYR 144


>ref|XP_002279638.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 368

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/135 (60%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = -2

Query: 414 DFIQLLGPDMSIKILTHLDDPCDLVRVSAVSSSWHRFVIENGLCKQLCLKMFPEIFSVAR 235
           DFI+ LG DMSIKIL  L+DP DLVRVS VS  W +FVIENGL KQLCL+M PE+ S+A 
Sbjct: 9   DFIRWLGRDMSIKILMCLEDPSDLVRVSTVSRLWRQFVIENGLSKQLCLRMLPEMSSLAG 68

Query: 234 SIEVDNMIEPEPITNMLGSYTNWECLKRNHKVYAVLAFGLT-PVRKSCISKAISATSTDN 58
           +IE++NMIE E + +   +    + L++NH+VYA LA GLT  +R +CI++AISA+STDN
Sbjct: 69  AIEINNMIETEEVQS---NNMERKILEKNHRVYAYLAQGLTSSMRTACIARAISASSTDN 125

Query: 57  YPEESILNTLEPRDR 13
           YPEE+I NTL+PRDR
Sbjct: 126 YPEETIDNTLDPRDR 140


>ref|XP_003619132.1| F-box family protein [Medicago truncatula]
           gi|355494147|gb|AES75350.1| F-box family protein
           [Medicago truncatula]
          Length = 309

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
 Frame = -2

Query: 438 MSEVRNKMDFIQLLGPDMSIKILTHLD--DPCDLVRVSAVSSSWHRFVIENGLCKQLCLK 265
           MSE +N  DFIQ LG DMSI +  HL+  DPCDL+R SAVS SW++FV++NGLCK+ C K
Sbjct: 1   MSEGKNTQDFIQCLGRDMSIDVFNHLNLNDPCDLIRASAVSKSWYQFVVKNGLCKKRCFK 60

Query: 264 MFPEIFSVARSIEVDNMIEPEPITNMLGSYTNWECLKRNHKVYAVLAFGLTPVRKSCISK 85
           + PE+  V  SIEVDN+I  EP+++M G   +WECLKRNHKVYA LAF L    K+ I+ 
Sbjct: 61  LLPELIDVVDSIEVDNII--EPVSDMDGVCADWECLKRNHKVYAALAFHLARYVKNGITS 118

Query: 84  AISATSTDN 58
            I A+ + N
Sbjct: 119 KIEASYSLN 127


>ref|XP_004143627.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
           gi|449527838|ref|XP_004170916.1| PREDICTED: F-box
           protein At4g00755-like [Cucumis sativus]
          Length = 370

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = -2

Query: 414 DFIQLLGPDMSIKILTHLDDPCDLVRVSAVSSSWHRFVIENGLCKQLCLKMFPEIFSVAR 235
           DF+Q LG D+S KI T+LDDP DLV V  V+SSW +FVIEN L KQLCL++FP++     
Sbjct: 6   DFLQRLGADLSFKIFTYLDDPSDLVHVCLVTSSWRQFVIENSLSKQLCLRLFPDLSGAPH 65

Query: 234 SIEVDNMIEPEPITNMLGSYTNWECLKRNHKVYAVLAFGLTPV-RKSCISKAISATSTDN 58
            IEV  MI+   + +   S T WE L++ H++Y +LA  L PV R  CI+ AI A+STDN
Sbjct: 66  FIEVKGMIDVSAVGS--SSITKWEHLQKFHRIYLLLAKSLNPVTRTDCIAVAIGASSTDN 123

Query: 57  YPEESILNTLEPRDRTENR 1
            P ESI NTLEP DR  NR
Sbjct: 124 NPIESIENTLEPGDRFRNR 142


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