BLASTX nr result

ID: Glycyrrhiza23_contig00002633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002633
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38352.1| unknown [Lotus japonicus]                               81   1e-13
ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro...    73   2e-11
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    73   3e-11
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    73   3e-11
ref|XP_003604650.1| 30S ribosomal protein S31 [Medicago truncatu...    70   2e-10

>gb|AFK38352.1| unknown [Lotus japonicus]
          Length = 121

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = -3

Query: 374 ARPRNKNKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 246
           ARP++K KGRGPPRL+APP P+KKDKFEDNE+VKI+IDESLFS
Sbjct: 78  ARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVVKIDIDESLFS 120


>ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine
           max]
          Length = 121

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = -3

Query: 374 ARPRNKNKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 246
           ARP++K KGRGP R +APP PSKKD+ EDNE+VKIEIDESLFS
Sbjct: 78  ARPKDKKKGRGPLRPYAPPAPSKKDRLEDNEVVKIEIDESLFS 120


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = -3

Query: 374 ARPRNKNKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 246
           ARPRNK KGRGPPR   PP P KKD+FED+E+VKIEIDESLF+
Sbjct: 76  ARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 118


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = -3

Query: 374 ARPRNKNKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFS 246
           ARPRNK KGRGPPR   PP P KKD+FED+E+VKIEIDESLF+
Sbjct: 75  ARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 117


>ref|XP_003604650.1| 30S ribosomal protein S31 [Medicago truncatula]
           gi|355505705|gb|AES86847.1| 30S ribosomal protein S31
           [Medicago truncatula]
          Length = 123

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = -3

Query: 374 ARPRNKNKGRGPPRLFAPPVPSKKDKFEDNEIVKIEIDESLFSS 243
           ARPRNKNKG GPPR++APP  +KK+K ED E+++IEI+ESLF S
Sbjct: 80  ARPRNKNKGTGPPRIYAPPDATKKEKLEDKEVIEIEINESLFPS 123


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