BLASTX nr result

ID: Glycyrrhiza23_contig00002632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002632
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242193.1| uncharacterized protein LOC100805197 [Glycin...    91   1e-16
ref|XP_003520780.1| PREDICTED: uncharacterized protein LOC100807...    88   6e-16
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    65   6e-09
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid...    65   6e-09
ref|XP_002531346.1| structural constituent of ribosome, putative...    64   1e-08

>ref|NP_001242193.1| uncharacterized protein LOC100805197 [Glycine max]
           gi|255640529|gb|ACU20550.1| unknown [Glycine max]
          Length = 158

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/71 (70%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
 Frame = -2

Query: 205 SCSLALHFQMNG*SAFPLQFSCRLCHSTRKGLVKERRLKRQRE---KGRAVRREIGSERR 35
           SC LA HFQMNG SAFP QFS  LCHST+KGL KE RL+R RE   K R V+RE GSERR
Sbjct: 63  SCPLASHFQMNGRSAFPWQFSGPLCHSTQKGLGKEWRLQRPREKRRKWRVVKREFGSERR 122

Query: 34  KG*RRKCAIER 2
           KG R  CAIER
Sbjct: 123 KGERWNCAIER 133


>ref|XP_003520780.1| PREDICTED: uncharacterized protein LOC100807856 [Glycine max]
          Length = 159

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/72 (70%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = -2

Query: 205 SCSLA-LHFQMNG*SAFPLQFSCRLCHSTRKGLVKERRLKRQRE---KGRAVRREIGSER 38
           SC LA LHFQMNG SAFP QFS  LCHST+KGL KE RL+R RE   K R V+RE GSER
Sbjct: 63  SCPLANLHFQMNGRSAFPWQFSGPLCHSTQKGLGKEWRLQRLREKRRKWRVVKREFGSER 122

Query: 37  RKG*RRKCAIER 2
           RKG R  CAIER
Sbjct: 123 RKGERWNCAIER 134


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 121 VYCGRGDRKTAKGKRFNHSFGNARPRNK 204
           VYCGRGDRKTAKGKRFNHSFGNARPRNK
Sbjct: 53  VYCGRGDRKTAKGKRFNHSFGNARPRNK 80


>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
           lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
           ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 121 VYCGRGDRKTAKGKRFNHSFGNARPRNK 204
           VYCGRGDRKTAKGKRFNHSFGNARPRNK
Sbjct: 53  VYCGRGDRKTAKGKRFNHSFGNARPRNK 80


>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +1

Query: 121 VYCGRGDRKTAKGKRFNHSFGNARPRNK 204
           VYCGRGD+KTAKGKRFNHSFGNARPRNK
Sbjct: 53  VYCGRGDKKTAKGKRFNHSFGNARPRNK 80


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