BLASTX nr result

ID: Glycyrrhiza23_contig00002500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002500
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helica...   145   3e-33
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   142   3e-32
ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002457482.1| hypothetical protein SORBIDRAFT_03g008040 [S...   141   6e-32
tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m...   140   1e-31

>ref|XP_003555264.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1209

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/82 (87%), Positives = 72/82 (87%)
 Frame = -3

Query: 246 IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXRVQPGECY 67
           IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVS         RVQPGECY
Sbjct: 659 IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAKQRRGRAGRVQPGECY 718

Query: 66  HLYPRRVYDAFAEYQLPEILRT 1
           HLYPR VYDAFAEYQLPEILRT
Sbjct: 719 HLYPRCVYDAFAEYQLPEILRT 740


>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1172

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/82 (84%), Positives = 72/82 (87%)
 Frame = -3

Query: 246 IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXRVQPGECY 67
           IAETSITINDV+FVLDCGKAKE+SYDALNNTPCLLP+WISKVS         RVQPGECY
Sbjct: 623 IAETSITINDVIFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECY 682

Query: 66  HLYPRRVYDAFAEYQLPEILRT 1
           HLYPR VYDAFAEYQLPEILRT
Sbjct: 683 HLYPRCVYDAFAEYQLPEILRT 704


>ref|XP_002315906.1| predicted protein [Populus trichocarpa] gi|222864946|gb|EEF02077.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/82 (84%), Positives = 72/82 (87%)
 Frame = -3

Query: 246 IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXRVQPGECY 67
           IAETSITIND+VFVLDCGKAKE+SYDALNNTPCLLP+WISKVS         RVQPGECY
Sbjct: 504 IAETSITINDIVFVLDCGKAKESSYDALNNTPCLLPSWISKVSAQQRRGRAGRVQPGECY 563

Query: 66  HLYPRRVYDAFAEYQLPEILRT 1
           HLYPR VYDAFAEYQLPEILRT
Sbjct: 564 HLYPRCVYDAFAEYQLPEILRT 585


>ref|XP_002457482.1| hypothetical protein SORBIDRAFT_03g008040 [Sorghum bicolor]
            gi|241929457|gb|EES02602.1| hypothetical protein
            SORBIDRAFT_03g008040 [Sorghum bicolor]
          Length = 1390

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/82 (81%), Positives = 71/82 (86%)
 Frame = -3

Query: 246  IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXRVQPGECY 67
            +AETSITINDVVFV+DCGKAKETSYDALNNTPCLLPTWISK S         RVQPGECY
Sbjct: 830  LAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPGECY 889

Query: 66   HLYPRRVYDAFAEYQLPEILRT 1
            HLYPR VYDAFA+YQLPE+LRT
Sbjct: 890  HLYPRSVYDAFADYQLPELLRT 911


>tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
          Length = 1381

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/82 (81%), Positives = 71/82 (86%)
 Frame = -3

Query: 246  IAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXRVQPGECY 67
            +AETSITINDVVFV+DCGKAKETSYDALNNTPCLLPTWISK S         RVQPGECY
Sbjct: 822  LAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAGRVQPGECY 881

Query: 66   HLYPRRVYDAFAEYQLPEILRT 1
            HLYPR VYDAFA+YQLPE+LRT
Sbjct: 882  HLYPRCVYDAFADYQLPELLRT 903


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