BLASTX nr result

ID: Glycyrrhiza23_contig00002490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002490
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543789.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   154   7e-36
ref|XP_003552526.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   143   2e-32
ref|XP_004147471.1| PREDICTED: transcription factor HB29-like [C...   139   2e-31
ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   136   2e-30
ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]...   135   3e-30

>ref|XP_003543789.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 331

 Score =  154 bits (389), Expect = 7e-36
 Identities = 78/107 (72%), Positives = 84/107 (78%), Gaps = 5/107 (4%)
 Frame = -3

Query: 308 NTNIKPLTFSNGVLKRXXXXXXHNNAQAVAAVTYKECLKNHVASLGGHAVDGCCEFMPSP 129
           N N KP++FSNGVLKR       ++    AAV YKECLKNHVASLGGHA+DGC EFMPSP
Sbjct: 33  NPNPKPVSFSNGVLKR-------HHVNHRAAVVYKECLKNHVASLGGHALDGCGEFMPSP 85

Query: 128 IATADDPSSIKCAACGCHRNFHRREPEE-PISA----VFEYQPHHRH 3
            ATADDPSSIKCAACGCHRNFHRREPEE PIS     V EY+PHHRH
Sbjct: 86  AATADDPSSIKCAACGCHRNFHRREPEESPISPATHHVLEYRPHHRH 132


>ref|XP_003552526.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 338

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/106 (68%), Positives = 79/106 (74%), Gaps = 5/106 (4%)
 Frame = -3

Query: 305 TNIKPLTFSNGVLKRXXXXXXHNNAQAVAAVTYKECLKNHVASLGGHAVDGCCEFMPSPI 126
           T  K L+FSNGVLKR      H+   AV  VTYKECLKNH A+LGG A+DGC EFMPSP 
Sbjct: 39  TTTKTLSFSNGVLKRHHHHHLHHPMPAV--VTYKECLKNHAANLGGLALDGCGEFMPSPT 96

Query: 125 ATADDPSSIKCAACGCHRNFHRREPEEP-----ISAVFEYQPHHRH 3
           ATA DPSSIKCAACGCHRNFHRREPE+P      + V EYQPHHRH
Sbjct: 97  ATAADPSSIKCAACGCHRNFHRREPEDPPITSNTTHVIEYQPHHRH 142


>ref|XP_004147471.1| PREDICTED: transcription factor HB29-like [Cucumis sativus]
           gi|449509241|ref|XP_004163533.1| PREDICTED:
           transcription factor HB29-like [Cucumis sativus]
          Length = 298

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/108 (63%), Positives = 78/108 (72%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299 IKPLT----FSNGVLKRXXXXXXHNNAQAVAAVTYKECLKNHVASLGGHAVDGCCEFMPS 132
           I+P T    F+NGVLKR       + A     V YKECLKNH ASLGGHA+DGC EFMPS
Sbjct: 34  IQPTTKSHPFTNGVLKRHH-----HTAPPPPQVVYKECLKNHAASLGGHALDGCGEFMPS 88

Query: 131 PIATADDPSSIKCAACGCHRNFHRREPEEPISA-----VFEYQPHHRH 3
           P ATA DP+S+KCAACGCHRNFHRREP++PI+      V EYQPHHRH
Sbjct: 89  PTATATDPTSLKCAACGCHRNFHRREPDDPIATPTTTHVIEYQPHHRH 136


>ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 341

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/103 (64%), Positives = 77/103 (74%), Gaps = 5/103 (4%)
 Frame = -3

Query: 296 KPLTFSNGVLKRXXXXXXHNNAQAVA---AVTYKECLKNHVASLGGHAVDGCCEFMPSPI 126
           K L+ +NGVLKR      H++    A    V YKECLKNH ASLGGHA+DGC EFMPSP 
Sbjct: 41  KGLSLTNGVLKRHQQHHHHHHHHFAAPQVVVAYKECLKNHAASLGGHALDGCGEFMPSPT 100

Query: 125 ATADDPSSIKCAACGCHRNFHRREPEE--PISAVFEYQPHHRH 3
           AT+ DP+S+KCAACGCHRNFHRREP++  P + V EYQPHHRH
Sbjct: 101 ATSADPTSLKCAACGCHRNFHRREPDDPPPTTHVIEYQPHHRH 143


>ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]
           gi|124359224|gb|ABN05735.1| Homeobox domain, ZF-HD
           class; ZF-HD homeobox protein Cys/His-rich dimerisation
           region; Homeodomain-like [Medicago truncatula]
           gi|124360958|gb|ABN08930.1| Homeobox domain, ZF-HD
           class; ZF-HD homeobox protein Cys/His-rich dimerisation
           region; Homeodomain-like [Medicago truncatula]
           gi|355496208|gb|AES77411.1| ZF-HD homeobox protein
           [Medicago truncatula]
          Length = 341

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/109 (64%), Positives = 77/109 (70%), Gaps = 7/109 (6%)
 Frame = -3

Query: 308 NTNIKPLTFSNGVLKRXXXXXXH----NNAQAVAAVTYKECLKNHVASLGGHAVDGCCEF 141
           +T  K   FSNGVLKR      H    NN Q    +TYKECLKNH A+LGGHA+DGC EF
Sbjct: 53  STTPKISPFSNGVLKRFHHHHHHFNHHNNHQPT--ITYKECLKNHAANLGGHALDGCGEF 110

Query: 140 MPSPIATADDPSSIKCAACGCHRNFHRREPEEP---ISAVFEYQPHHRH 3
           M SP AT  DP+S+KCAACGCHRNFHRREPEEP    + V EYQPHHRH
Sbjct: 111 MTSPTATPTDPTSLKCAACGCHRNFHRREPEEPPLTTTHVIEYQPHHRH 159


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