BLASTX nr result

ID: Glycyrrhiza23_contig00002472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002472
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycin...   288   2e-75
ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chlorop...   283   4e-74
ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chlorop...   283   7e-74
ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|2...   270   5e-70
ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|1...   268   1e-69

>ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycine max]
           gi|255627157|gb|ACU13923.1| unknown [Glycine max]
          Length = 207

 Score =  288 bits (737), Expect = 2e-75
 Identities = 153/190 (80%), Positives = 165/190 (86%), Gaps = 2/190 (1%)
 Frame = -3

Query: 949 QKPNTLSFARTNTLSLS--RVPKNPSLXXXXXXXXXXXXXAELERQEIKKHVKSRLPGGF 776
           Q+PNTLSFART +LS+S  R PK PS              AE E +++K +VKSRLPGGF
Sbjct: 23  QRPNTLSFARTESLSVSVSRFPKTPS-----SLVVSATALAEPETEDLKNYVKSRLPGGF 77

Query: 775 AAQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETS 596
           AAQTIIGTGRRKSAIARVVLQEGTGK IINYR+AKEYLQGNPLWLQYIKVPL+TLGYE++
Sbjct: 78  AAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITLGYESN 137

Query: 595 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHK 416
           YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKK GL K
Sbjct: 138 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKVGLKK 197

Query: 415 ARKAPQFSKR 386
           ARKAPQ+SKR
Sbjct: 198 ARKAPQYSKR 207


>ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chloroplastic-like [Glycine
           max]
          Length = 207

 Score =  283 bits (725), Expect = 4e-74
 Identities = 152/190 (80%), Positives = 163/190 (85%), Gaps = 2/190 (1%)
 Frame = -3

Query: 949 QKPNTLSFARTNTLSLS--RVPKNPSLXXXXXXXXXXXXXAELERQEIKKHVKSRLPGGF 776
           Q+P TLSFART +LSLS    PK PS              AE E +++KK+VKSRLPGGF
Sbjct: 23  QRPCTLSFARTESLSLSVSPFPKTPS-----SLVVTATALAEPETEDLKKYVKSRLPGGF 77

Query: 775 AAQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETS 596
           AAQTIIGTGRRKSAIARVVLQEGTGK IINYR+AKEYLQGNPLWLQYIKVPL+TLGYE++
Sbjct: 78  AAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITLGYESN 137

Query: 595 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHK 416
           YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHR PLRQEGLLTRDSRVVERKK GL K
Sbjct: 138 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKVGLKK 197

Query: 415 ARKAPQFSKR 386
           ARKAPQ+SKR
Sbjct: 198 ARKAPQYSKR 207


>ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera]
           gi|147855629|emb|CAN79164.1| hypothetical protein
           VITISV_019246 [Vitis vinifera]
           gi|302142422|emb|CBI19625.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  283 bits (723), Expect = 7e-74
 Identities = 147/188 (78%), Positives = 162/188 (86%)
 Frame = -3

Query: 949 QKPNTLSFARTNTLSLSRVPKNPSLXXXXXXXXXXXXXAELERQEIKKHVKSRLPGGFAA 770
           Q+P++LSF R+N+LS+S + K  SL              ELE  ++KK+VKSRLPGGFAA
Sbjct: 23  QRPSSLSFVRSNSLSISHLTKTSSLAVVASAAAVASPL-ELETADLKKYVKSRLPGGFAA 81

Query: 769 QTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETSYD 590
           QTIIGTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+SYD
Sbjct: 82  QTIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYD 141

Query: 589 VFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHKAR 410
           VFVKA GGGLSGQAQAISLGIARALLKVSEDHR PLR+EGLLTRDSRVVERKK GL KAR
Sbjct: 142 VFVKAHGGGLSGQAQAISLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKKVGLKKAR 201

Query: 409 KAPQFSKR 386
           KAPQFSKR
Sbjct: 202 KAPQFSKR 209


>ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|222844190|gb|EEE81737.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  270 bits (690), Expect = 5e-70
 Identities = 140/189 (74%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
 Frame = -3

Query: 949 QKPNTLSFARTNTLSLSRVP-KNPSLXXXXXXXXXXXXXAELERQEIKKHVKSRLPGGFA 773
           QKPNTLSF+R+ +LSLS  P  N +               E    ++KK VKSRLPGGFA
Sbjct: 23  QKPNTLSFSRSKSLSLSLSPYSNSNKQPFTLRVTATVASPETTTTDLKKLVKSRLPGGFA 82

Query: 772 AQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETSY 593
           AQ I GTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+SY
Sbjct: 83  AQPIHGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSY 142

Query: 592 DVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHKA 413
           DVFVKA GGGLSGQAQAISLG+ARALLKVS++HR+PL++EGLLTRDSR+VERKK GL KA
Sbjct: 143 DVFVKAHGGGLSGQAQAISLGVARALLKVSQNHRIPLKREGLLTRDSRIVERKKVGLKKA 202

Query: 412 RKAPQFSKR 386
           RKAPQFSKR
Sbjct: 203 RKAPQFSKR 211


>ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|118483304|gb|ABK93554.1|
           unknown [Populus trichocarpa]
           gi|222835218|gb|EEE73653.1| predicted protein [Populus
           trichocarpa]
          Length = 210

 Score =  268 bits (686), Expect = 1e-69
 Identities = 141/190 (74%), Positives = 157/190 (82%), Gaps = 2/190 (1%)
 Frame = -3

Query: 949 QKPNTLSFARTNTLS--LSRVPKNPSLXXXXXXXXXXXXXAELERQEIKKHVKSRLPGGF 776
           QKPNTLSF+R+N+LS  LS   K P                     ++KK VKSRLPGGF
Sbjct: 23  QKPNTLSFSRSNSLSFPLSHPSKQP--LTLRVSATVASPETTTTTTDLKKLVKSRLPGGF 80

Query: 775 AAQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETS 596
           AAQTI GTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+S
Sbjct: 81  AAQTIHGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESS 140

Query: 595 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHK 416
           YDVFVKA GGGL+GQAQAISLG+ARALLKVS+DHR+PL++EGLLTRDSR+VERKK GL K
Sbjct: 141 YDVFVKAHGGGLAGQAQAISLGVARALLKVSQDHRIPLKREGLLTRDSRIVERKKVGLKK 200

Query: 415 ARKAPQFSKR 386
           ARKAPQFSKR
Sbjct: 201 ARKAPQFSKR 210


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