BLASTX nr result

ID: Glycyrrhiza23_contig00002440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002440
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...   406   e-111
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...   290   3e-76
ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816...   271   2e-70
ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258...   104   3e-20
emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]    86   1e-14

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
            gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
            factor fip1 [Medicago truncatula]
          Length = 1110

 Score =  406 bits (1044), Expect = e-111
 Identities = 209/308 (67%), Positives = 241/308 (78%), Gaps = 5/308 (1%)
 Frame = -3

Query: 910  EDECLKYTYNQASYLKYQRQSYTDSARNCVYGTRVNENFRGHERHKHATNKGNDWRCDYT 731
            EDE  KY +NQ SY KYQRQSYTDSARN  Y  R N++FR HE H HATN+GNDW+C YT
Sbjct: 742  EDEFPKYAHNQNSYFKYQRQSYTDSARN--YMHRENDSFREHETHNHATNRGNDWQCGYT 799

Query: 730  DAAED--FITSPVKESEFYPLPSEDPHWTNDDNIVWNNDELHPEDDTFFYEEIPRHERHV 557
            DAAED    TSPV E EFYPLP E  HWTN+DNIVWN+D+LHPEDD  FYEE P HERH 
Sbjct: 800  DAAEDEGCTTSPVDECEFYPLPYEVSHWTNNDNIVWNHDDLHPEDDAIFYEEPPMHERHA 859

Query: 556  RNGSLHAKVRIDDIKLRQHQLNLPRRDSDSFLERNSKVMSRDHCQQAVVRCRKSVDLINR 377
            R+ SLHA+V+ +DIKL+QHQLN  RR  D F++R+SKVMSRDH    V+R +KS  LINR
Sbjct: 860  RHRSLHARVQRNDIKLQQHQLNFSRRGGDIFIKRSSKVMSRDHSHPTVLRYKKSGALINR 919

Query: 376  EVKSHAKSSRVVCNDRLENVDRGIAKKR---VGFDDSHKKANKFDISKFVCDNSNQKSLQ 206
            E KS AK SR++ ND L+NVDRGIA+KR   VGFDDS KKA K D+SK  C + N+K LQ
Sbjct: 920  EGKS-AKGSRLMRNDTLQNVDRGIAEKRKALVGFDDSRKKAIKLDVSKSQCVDQNKKLLQ 978

Query: 205  NLPDKGQKQGLDIEEGEIVTEEPYMEASVSRRDVSEGAALTDSVKKRVSQNGNNSELHIG 26
            NL DKGQK+GLD+EEGEIVTEEP +E SVSRRDVSEGA L ++VKK++SQNGNNSE  I 
Sbjct: 979  NLSDKGQKEGLDVEEGEIVTEEPSVEVSVSRRDVSEGATLAENVKKKISQNGNNSEPQID 1038

Query: 25   NFDSQKIL 2
            N DSQKIL
Sbjct: 1039 NLDSQKIL 1046


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score =  290 bits (742), Expect = 3e-76
 Identities = 163/312 (52%), Positives = 210/312 (67%), Gaps = 9/312 (2%)
 Frame = -3

Query: 910  EDECLKYTYNQASYLKYQRQSYTDSARNCVYGTRVNENFRGHERHKHAT-NKGNDWRCDY 734
            ED C KYT+ + S  K++RQSYTDS +N  YG+RVN N  G  R KHA  N+ ++W CDY
Sbjct: 753  EDNCQKYTHFRTSNFKHRRQSYTDSVKNYAYGSRVNGNLGGSGRDKHARDNRDSNWSCDY 812

Query: 733  TDAAED--FITSPVKESEFYPLPSEDPHWTNDDNIVWNNDELHPEDDTFFYEEIPRHERH 560
            TD AED  F   PVKE +FY  PS+  +WT D+ I                    RHE H
Sbjct: 813  TDTAEDEDFRICPVKEYQFYRSPSKFLNWTEDEIIFM------------------RHETH 854

Query: 559  VRNGSLHAKVRIDDIKLRQHQLNLPRRDSDSFLERNSKVMSRDHCQQAVVRCRKSVDLIN 380
                SL  KV+ DD+ L+QHQL++P+RD++ + + +SK+M R    QAV+RCRKSVDLI+
Sbjct: 855  AT--SLFTKVQSDDLPLQQHQLSMPKRDNEKYFKGSSKIMCRSKGGQAVLRCRKSVDLIH 912

Query: 379  REVKSHAKSSRVVCNDRLENVDRGIAKKR----VGFDDSHKKANKFDISKFVCDNSNQKS 212
             E KS  +SSRV CN RLENV++GIAKKR    VGFD+S+K   KFD  K+  +  ++K 
Sbjct: 913  GEGKSQVRSSRVSCNGRLENVNQGIAKKRKRASVGFDESNKNTFKFDSPKYESNLKSKKW 972

Query: 211  LQNLPDKGQKQGLDIEEGEIVTEEPYME-ASVSRRDVSEGAALTDSV-KKRVSQNGNNSE 38
            +QNL D+ QK+  DIEEG+IV EEPYME  SVSRRD SEG A+TDSV KKR+SQN N+S+
Sbjct: 973  VQNLQDQAQKESSDIEEGQIVAEEPYMEKVSVSRRDASEGPAVTDSVNKKRMSQNENSSD 1032

Query: 37   LHIGNFDSQKIL 2
             +IG +DSQ+IL
Sbjct: 1033 QYIGGYDSQRIL 1044


>ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816396 [Glycine max]
          Length = 1121

 Score =  271 bits (693), Expect = 2e-70
 Identities = 154/311 (49%), Positives = 204/311 (65%), Gaps = 8/311 (2%)
 Frame = -3

Query: 910  EDECLKYTYNQASYLKYQRQSYTDSARNCVYGTRVNENFRGHERHKHAT-NKGNDWRCDY 734
            ED C KYT+ Q S  KY+RQSYTDSA+N  YG RVN NF G  R KHA  N+G++W C Y
Sbjct: 783  EDNCQKYTHCQTSSFKYRRQSYTDSAKNYAYGERVNGNFGGSGRDKHARDNRGSNWLCGY 842

Query: 733  TDAAED--FITSPVKESEFYPLPSEDPHWTNDDNIVWNNDELHPEDDTFFYEEIPRHERH 560
            TD AED  F   PVK+ +FY  PS+  +WT D+ I++ + E H                 
Sbjct: 843  TDTAEDEDFPIYPVKKYQFYRSPSKFLNWTEDE-IIYRHHETHAT--------------- 886

Query: 559  VRNGSLHAKVRIDDIKLRQHQLNLPRRDSDSFLERNSKVMSRDHCQQAVVRCRKSVDLIN 380
                SL AKV+ DD+ L++HQL++P RDS+ + + +SK+M R    QA++RCRKSVDLI+
Sbjct: 887  ----SLFAKVQSDDLPLQRHQLSMPIRDSEKYFKGSSKIMCRSKGGQALLRCRKSVDLIH 942

Query: 379  REVKSHAKSSRVVCNDRLENVDRGIAKKR----VGFDDSHKKANKFDISKFVCDNSNQKS 212
             E KS  +SSRV+CN RLEN ++ IAKKR    VGFD+S+K A+KFD  K   +  ++K 
Sbjct: 943  GEGKSQVRSSRVLCNGRLENANQRIAKKRRRAAVGFDESNKNASKFDTPKHKSNQESKKW 1002

Query: 211  LQNLPDKGQKQGLDIEEGEIVTEEPYMEASVSRRDVSEGAALTDSV-KKRVSQNGNNSEL 35
            +Q+L D+ QK+  +IEEG+ V EEPYME      + SEG A+TD V KKR+SQN N+SE 
Sbjct: 1003 VQDLQDQAQKESSEIEEGQFVAEEPYME------EASEGPAVTDGVNKKRMSQNENSSEQ 1056

Query: 34   HIGNFDSQKIL 2
             IG +DSQ+IL
Sbjct: 1057 CIGGYDSQRIL 1067


>ref|XP_002272609.1| PREDICTED: uncharacterized protein LOC100258583 [Vitis vinifera]
            gi|296083247|emb|CBI22883.3| unnamed protein product
            [Vitis vinifera]
          Length = 1300

 Score =  104 bits (259), Expect = 3e-20
 Identities = 100/324 (30%), Positives = 158/324 (48%), Gaps = 21/324 (6%)
 Frame = -3

Query: 910  EDECLKYTYNQASYLKYQRQSYTDSARNCVYGTRVNENFRGHERHKHATN--KGNDWRCD 737
            EDE  ++  +Q+      R+ +T + RN V  +R+ E   G +R +      + +DW  +
Sbjct: 927  EDEYGRHVDHQSLSSWSYREPHTANGRNDVNDSRLTER-HGRDRRQICPQGYRESDWFGN 985

Query: 736  YTDA--AEDFITSPVKESEFYPLPS----EDPHWTNDDNIVWNNDE-LHPEDDTFFYEEI 578
              DA   +D I  P  + +     S    E  HWT  + I  + DE L+ E+ +  YE  
Sbjct: 986  DNDAYNTKDSIIGPDDQVQIGRRRSRRQYEALHWTEKELISSHLDENLYNEEASLSYERT 1045

Query: 577  PRHER-HVRNGSLHAKVRIDDIKLRQHQLNLPRRD-SDSFLERNSKVMSRDHCQQAVVRC 404
              H R H + GS H  + + + K +Q +    R   SD F++R+S V+ + + +QAV+R 
Sbjct: 1046 SGHTRIHTKYGSAHVGMLVHNKKSQQQRYKRIREGRSDDFIDRSSNVLGQGNHEQAVLRS 1105

Query: 403  RKSVDLINREVKSHAKSSR---VVCNDRLENV------DRGIAKKRVGFDDSHKKANKFD 251
            R SVDLI  E KS  + S     V +DR EN+      D+GI K   G      K  + D
Sbjct: 1106 RASVDLIVGEGKSSGRRSEARSAVHHDRFENMDWKIDEDQGILKDVNG--PQRGKIIQPD 1163

Query: 250  ISKFVCDNSNQKSLQNLPDKGQKQGLDIEEGEIVTEEPYMEASVSRRDVSEGAALTDSVK 71
            + K   + +N+K L         + LDIEEG+I+ EE   + SV  +D SE    + +VK
Sbjct: 1164 L-KSESNWNNEKCLDKFLVTEHDEALDIEEGQIIPEEMNEDDSVETKDASESITPSRNVK 1222

Query: 70   KRV-SQNGNNSELHIGNFDSQKIL 2
            +R+ + N  N    +   D+Q+IL
Sbjct: 1223 RRLGNANAANGNKVVAECDNQRIL 1246


>emb|CAN76673.1| hypothetical protein VITISV_011790 [Vitis vinifera]
          Length = 1338

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 99/362 (27%), Positives = 159/362 (43%), Gaps = 59/362 (16%)
 Frame = -3

Query: 910  EDECLKYTYNQASYLKYQRQSYTDSARNCVYGTRVNENFRGHERHKHATN--KGNDWRCD 737
            EDE  ++  +Q+      R+ +T + RN V  +R+ E   G +R +      + +DW  +
Sbjct: 927  EDEYGRHVDHQSLSSWSYREPHTANGRNDVNDSRLTER-HGRDRRQICPQGYRESDWFGN 985

Query: 736  YTDA--AEDFITSPVKESEFYPLPS----EDPHWTNDDNIVWNNDE-LHPEDDTFFYEEI 578
              DA   +D I  P  + +     S    E  HWT  + I  + DE L+ E+ +  YE  
Sbjct: 986  DNDAYNTKDSIIGPDDQVQIGRRRSRRQYEALHWTEKELISSHLDENLYNEEASLSYERT 1045

Query: 577  PRHER-HVRNGSLHAKVRIDDIKLRQHQLNLPRRD-SDSFLERNSKVMSRDHCQQAVVRC 404
              H R H + GS H  + + + K +Q +    R   SD F++R+S V+ + + +Q V+R 
Sbjct: 1046 SGHTRIHTKYGSAHVGMLVHNKKSQQQRYKRIREGRSDDFIDRSSNVLGQGNHEQXVLRS 1105

Query: 403  RKSVDLINREVK------------------SH-----------------------AKSSR 347
            R SVDLI  E K                  SH                       +++  
Sbjct: 1106 RASVDLIVGEGKCVASAFMAGSKAEYSQNVSHKIESFALAPTKDLLSFENSSGRRSEARS 1165

Query: 346  VVCNDRLENV------DRGIAKKRVGFDDSHKKANKFDISKFVCDNSNQKSLQNLPDKGQ 185
             V +DR EN+      D+GI K   G      K  + D+ K   + +N+K L        
Sbjct: 1166 AVHHDRFENMDWKIDEDQGILKDVNG--PQRGKIIQPDL-KSESNWNNEKCLDKFLVTEH 1222

Query: 184  KQGLDIEEGEIVTEEPYMEASVSRRDVSEGAALTDSVKKRV-SQNGNNSELHIGNFDSQK 8
             + LDIEEG+I+ EE   + SV  +D SE    + +VK+R+ + N  N    +   D+Q+
Sbjct: 1223 DEALDIEEGQIIPEEMNXDDSVETKDASESITPSRNVKRRLGNANAANGNKVVAECDNQR 1282

Query: 7    IL 2
            IL
Sbjct: 1283 IL 1284


Top