BLASTX nr result

ID: Glycyrrhiza23_contig00002426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002426
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521065.1| PREDICTED: 50S ribosomal protein L4, chlorop...   335   1e-89
ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chlorop...   335   1e-89
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop...   333   5e-89
ref|XP_003529033.1| PREDICTED: 50S ribosomal protein L4, chlorop...   333   6e-89
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]   313   5e-83

>ref|XP_003521065.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 2
           [Glycine max]
          Length = 301

 Score =  335 bits (859), Expect = 1e-89
 Identities = 171/219 (78%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = +2

Query: 35  IACKLAT-LPVLSFSGEKIGESTLDLKSAPADTXXXXXXXXXXXDLQNKRRGTASTLTRG 211
           I+CK +  LPVL+FSGE++GES LDL+SAP DT           DLQNKRRGTASTLTRG
Sbjct: 54  ISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRRGTASTLTRG 113

Query: 212 EVSGGGRKPYRQKKTGNARRGSTRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVD 391
           EV GGGRKP+ QKKTG ARRGS RTPLRPGGGV+FGPKPRDWSIKINRKEKRLAISTAV 
Sbjct: 114 EVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTAVA 173

Query: 392 SAAVNTVVVEQFAAEFEGRPKTKEFIASMKRWGLDPKEKAVFVMTEVPESVLLSSRNIGT 571
           SAA + VVVE FAAEF  +PKTKEFIA+MKRWGLDPKEKA+F+MTEVPE+V LSSRNIGT
Sbjct: 174 SAAASAVVVEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFLMTEVPENVRLSSRNIGT 233

Query: 572 LKILTPRTLNLYDILNADKLVLTPAAVDYLNQRYGVNYQ 688
           LK+ TPRTLNLYDIL+ADKLVLT  AVDYLNQRYG +YQ
Sbjct: 234 LKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYQ 272


>ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
           [Glycine max]
          Length = 310

 Score =  335 bits (859), Expect = 1e-89
 Identities = 171/219 (78%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = +2

Query: 35  IACKLAT-LPVLSFSGEKIGESTLDLKSAPADTXXXXXXXXXXXDLQNKRRGTASTLTRG 211
           I+CK +  LPVL+FSGE++GES LDL+SAP DT           DLQNKRRGTASTLTRG
Sbjct: 54  ISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRRGTASTLTRG 113

Query: 212 EVSGGGRKPYRQKKTGNARRGSTRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVD 391
           EV GGGRKP+ QKKTG ARRGS RTPLRPGGGV+FGPKPRDWSIKINRKEKRLAISTAV 
Sbjct: 114 EVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTAVA 173

Query: 392 SAAVNTVVVEQFAAEFEGRPKTKEFIASMKRWGLDPKEKAVFVMTEVPESVLLSSRNIGT 571
           SAA + VVVE FAAEF  +PKTKEFIA+MKRWGLDPKEKA+F+MTEVPE+V LSSRNIGT
Sbjct: 174 SAAASAVVVEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFLMTEVPENVRLSSRNIGT 233

Query: 572 LKILTPRTLNLYDILNADKLVLTPAAVDYLNQRYGVNYQ 688
           LK+ TPRTLNLYDIL+ADKLVLT  AVDYLNQRYG +YQ
Sbjct: 234 LKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYQ 272


>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
           sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
           ribosomal protein L4, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  333 bits (854), Expect = 5e-89
 Identities = 164/218 (75%), Positives = 193/218 (88%)
 Frame = +2

Query: 35  IACKLATLPVLSFSGEKIGESTLDLKSAPADTXXXXXXXXXXXDLQNKRRGTASTLTRGE 214
           I+ +LATLPVLSF+G+K+GE+ LDLKSAP +T           D QNKRRGTASTLTR E
Sbjct: 47  ISSELATLPVLSFTGQKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAE 106

Query: 215 VSGGGRKPYRQKKTGNARRGSTRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVDS 394
           VSGGG+KPY+QKKTG ARRGS RTPLRPGGGVVFGPKPRDWSIKINRKEK+LAISTAV S
Sbjct: 107 VSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKKLAISTAVAS 166

Query: 395 AAVNTVVVEQFAAEFEGRPKTKEFIASMKRWGLDPKEKAVFVMTEVPESVLLSSRNIGTL 574
           AAVNT+VVE+F  +FE +PKTKEFIA++KRWG+DPKEK++F+MTEV ++V LSSRNIGTL
Sbjct: 167 AAVNTIVVEEFGDKFE-KPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTL 225

Query: 575 KILTPRTLNLYDILNADKLVLTPAAVDYLNQRYGVNYQ 688
           K+LTPRTLNL+DIL++DKLVLTP AVDYLN+RYG+NY+
Sbjct: 226 KLLTPRTLNLFDILDSDKLVLTPTAVDYLNERYGINYE 263


>ref|XP_003529033.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
           [Glycine max] gi|356520772|ref|XP_003529034.1|
           PREDICTED: 50S ribosomal protein L4, chloroplastic-like
           isoform 2 [Glycine max]
          Length = 303

 Score =  333 bits (853), Expect = 6e-89
 Identities = 170/219 (77%), Positives = 187/219 (85%), Gaps = 1/219 (0%)
 Frame = +2

Query: 35  IACKLAT-LPVLSFSGEKIGESTLDLKSAPADTXXXXXXXXXXXDLQNKRRGTASTLTRG 211
           I+CK +  LPVL+FSGE++GES LDL+SAP DT           DLQNKRRGTASTLTRG
Sbjct: 49  ISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRRGTASTLTRG 108

Query: 212 EVSGGGRKPYRQKKTGNARRGSTRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVD 391
           EV GGGRKP+ QKKTG ARRGS RTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAV 
Sbjct: 109 EVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVA 168

Query: 392 SAAVNTVVVEQFAAEFEGRPKTKEFIASMKRWGLDPKEKAVFVMTEVPESVLLSSRNIGT 571
           SAA + VVVE FA EF  +PKTKEFIA+MKRWGLDPKEKA+F+MTEVPE+V LSSRNIGT
Sbjct: 169 SAAASAVVVEDFATEFAEKPKTKEFIAAMKRWGLDPKEKAMFLMTEVPENVRLSSRNIGT 228

Query: 572 LKILTPRTLNLYDILNADKLVLTPAAVDYLNQRYGVNYQ 688
           LK+ TPRTLNLYDIL+ADKLVLT  AVDYLNQRYG +Y+
Sbjct: 229 LKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYE 267


>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
          Length = 306

 Score =  313 bits (802), Expect = 5e-83
 Identities = 155/211 (73%), Positives = 181/211 (85%)
 Frame = +2

Query: 47  LATLPVLSFSGEKIGESTLDLKSAPADTXXXXXXXXXXXDLQNKRRGTASTLTRGEVSGG 226
           L  +P+LSF+GEK+GE+ L+LKSAP DT           DLQN+RRGTASTLTRGEV GG
Sbjct: 50  LVAIPILSFTGEKVGETQLNLKSAPLDTARAVVHRGIITDLQNRRRGTASTLTRGEVRGG 109

Query: 227 GRKPYRQKKTGNARRGSTRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAVDSAAVN 406
           G+KPY QKKTG ARRGS RTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTA+ SAAVN
Sbjct: 110 GKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAMSSAAVN 169

Query: 407 TVVVEQFAAEFEGRPKTKEFIASMKRWGLDPKEKAVFVMTEVPESVLLSSRNIGTLKILT 586
           T+VVE F+ +F+ +PKTKEFI++MKRWG+DPKEK++F+MTEV ++V LSSRNIGTLK+LT
Sbjct: 170 TIVVEDFSDKFD-KPKTKEFISAMKRWGIDPKEKSMFLMTEVSDNVRLSSRNIGTLKMLT 228

Query: 587 PRTLNLYDILNADKLVLTPAAVDYLNQRYGV 679
           PRTLNL+DILN+DKLVLT   VDYLN+ Y V
Sbjct: 229 PRTLNLFDILNSDKLVLTQETVDYLNRMYAV 259


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