BLASTX nr result
ID: Glycyrrhiza23_contig00002411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00002411
(1992 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homol... 493 e-136
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol... 492 e-136
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] 414 e-113
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257... 413 e-112
ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,... 389 e-105
>ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 493 bits (1268), Expect = e-136
Identities = 277/452 (61%), Positives = 281/452 (62%), Gaps = 7/452 (1%)
Frame = -1
Query: 1779 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 1600
MDSDQGKLFIGGISWDT EDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 1599 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 1420
DRVLEDKHVIDGRTVDAK+AFSREDQQISVTSR GN NS MNS NGGNIRTKKIFVGGLP
Sbjct: 61 DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSENGGNIRTKKIFVGGLP 120
Query: 1419 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 1240
PTLTEEKFR YFESYGHVTDVVVMYDQNTGRPRGFGFISFDTE+AVDRVLHKSFHDLNGK
Sbjct: 121 PTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGK 180
Query: 1239 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDGRMDSSRYMQPQ 1060
QVEVKRALPKDANP YDGRMDSSRYMQPQ
Sbjct: 181 QVEVKRALPKDANPGASGRMMGGAGGGGAGIGGYQGYGASGGSQNAYDGRMDSSRYMQPQ 240
Query: 1059 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
SAAGGFPPYGSSAYSAP
Sbjct: 241 SAAGGFPPYGSSAYSAPGYGYGPANNGIGYGAYGSYGSATAGYGGPAGATYGNPNVPNAA 300
Query: 879 XXXXXXXXPRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 700
PRSSWPAQAPSGYGSMGY
Sbjct: 301 YAGGPPGGPRSSWPAQAPSGYGSMGYGNTAAWGAPSGGAGSGGGGPGSATAGQSPGGAAG 360
Query: 699 XXXXXXXXXXXXXXXGSD-----PSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXX 535
GSD S YG VGGRTGS PNSNA
Sbjct: 361 YGNQGYGYGGYAGYGGSDSSYGNSSAYGTVGGRTGSGPNSNASAPGGTELTSSGGSGNYM 420
Query: 534 XXXXGDANGNSGYGNASWRSEQ--ASGNYGTP 445
GDANGNSGYGNA+WRSEQ ASGNYGTP
Sbjct: 421 GGGYGDANGNSGYGNAAWRSEQTHASGNYGTP 452
>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 492 bits (1267), Expect = e-136
Identities = 277/452 (61%), Positives = 283/452 (62%), Gaps = 7/452 (1%)
Frame = -1
Query: 1779 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 1600
MDSDQGKLFIGGISWDT EDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 1599 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 1420
DRVLEDKHVIDGRTVDAK+AFSREDQQISVTSR GN NS MNSGNGGNIRTKKIFVGGLP
Sbjct: 61 DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLP 120
Query: 1419 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 1240
PTLTEEKFRQYFESYG+VTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK
Sbjct: 121 PTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 180
Query: 1239 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDGRMDSSRYMQPQ 1060
QVEVKRALPKDANP DGRMDSSRYMQPQ
Sbjct: 181 QVEVKRALPKDANPGASGRMMGGAGGGGYQGYGASGGNQNAY-----DGRMDSSRYMQPQ 235
Query: 1059 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
SAAGGFPPYGSSAYSAP
Sbjct: 236 SAAGGFPPYGSSAYSAPGYGYGPASNGIGYGAYGSYGGATAGYGGPAAATYGNPNVPNAA 295
Query: 879 XXXXXXXXPRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 700
PRS+WPAQAPSGYGSMGY
Sbjct: 296 YAGGPPGGPRSTWPAQAPSGYGSMGYGNTAAWGAPSGGAGSGGGGPGSATAGQSPGGAAG 355
Query: 699 XXXXXXXXXXXXXXXGSDPS-----VYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXX 535
GSD S YG VGGRTGSAPN+NA
Sbjct: 356 YGNQGYGYGGYGGYGGSDSSYGNSGAYGTVGGRTGSAPNNNASASGGSELTSSGGSGNYM 415
Query: 534 XXXXGDANGNSGYGNASWRSEQ--ASGNYGTP 445
GDANGNSGYGNA+WRSEQ ASGNYGTP
Sbjct: 416 GGGYGDANGNSGYGNAAWRSEQTHASGNYGTP 447
>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 414 bits (1065), Expect = e-113
Identities = 236/446 (52%), Positives = 267/446 (59%), Gaps = 3/446 (0%)
Frame = -1
Query: 1779 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 1600
MDSDQGKLFIGGISW+T+EDKLKE+FG+YG+V VMR+K TG+PRGFGFVVFADPSIL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 1599 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 1420
DRVL++KH+IDGRTV+AKRA SRE+QQ S SR GN NSA NSG GGN++TKKIFVGGLP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTS--SRAGNFNSARNSGGGGNVKTKKIFVGGLP 118
Query: 1419 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 1240
PTL+EE FRQYFE++GHVTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+K+FHDLNGK
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGK 178
Query: 1239 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDGRMDSSRYMQPQ 1060
QVEVKRALPKDANP YDGRMDS+RYMQPQ
Sbjct: 179 QVEVKRALPKDANP--GGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQ 236
Query: 1059 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
+ GGFPPYGSS YSAP
Sbjct: 237 NTGGGFPPYGSSGYSAPGYGYGPANNGMGYGGYGGYGGANPGYGGPAGAPYGNPNVPNAG 296
Query: 879 XXXXXXXXPRSSWPAQAPSGYGSMGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 703
PRSSW +QAPSGYG++GY
Sbjct: 297 YAGGPPGAPRSSWNSQAPSGYGAVGYGNAASWGPSAGGGAGSGGTGSASSGQSPSGAAGY 356
Query: 702 XXXXXXXXXXXXXXXXGSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXXXXX 523
++P+ YGAVGGRTGS PNSNA
Sbjct: 357 GNQSYGYGGYGGSEGSYANPTGYGAVGGRTGSGPNSNA-----GGGELQGSGGGYMGGGY 411
Query: 522 GDANGNSGYGNASWRSE--QASGNYG 451
GDANGNSGYGNASW+S+ QASGNYG
Sbjct: 412 GDANGNSGYGNASWKSDPSQASGNYG 437
>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 413 bits (1061), Expect = e-112
Identities = 235/446 (52%), Positives = 266/446 (59%), Gaps = 3/446 (0%)
Frame = -1
Query: 1779 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 1600
MDSDQGKLFIGGISW+T+EDKLKE+FG+YG+V VMR+K TG+PRGFGFVVFADPSIL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 1599 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 1420
DRVL++KH+IDGRTV+AKRA SRE+QQ S SR GN NSA NSG GGN++TKKIFVGGLP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTS--SRAGNFNSARNSGGGGNVKTKKIFVGGLP 118
Query: 1419 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 1240
PTL+EE FRQYFE++GHVTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+K+FHDLNGK
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGK 178
Query: 1239 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDGRMDSSRYMQPQ 1060
QVEVKRALPKDANP YDGRMDS+RYMQPQ
Sbjct: 179 QVEVKRALPKDANP--GGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQ 236
Query: 1059 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 880
+ GGFPPYGSS YSAP
Sbjct: 237 NTGGGFPPYGSSGYSAPGYGYGPANNGMGYGGYGGYGGANPGYGGPAGAPYGNPNVPNAG 296
Query: 879 XXXXXXXXPRSSWPAQAPSGYGSMGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 703
PRSSW +QAPSGYG +GY
Sbjct: 297 YAGGPPGAPRSSWNSQAPSGYGGVGYGNAASWGSSAGGGAGSGGTGSASSGQSPSGAAGY 356
Query: 702 XXXXXXXXXXXXXXXXGSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXXXXX 523
++P+ YGAVGGRTGS PNSNA
Sbjct: 357 GNQSYGYGGYGGSEGSYANPTGYGAVGGRTGSGPNSNA-----GGGELQGSGGGYMGGGY 411
Query: 522 GDANGNSGYGNASWRSE--QASGNYG 451
GDANGNSGYGNA+W+S+ QASGNYG
Sbjct: 412 GDANGNSGYGNAAWKSDPSQASGNYG 437
>ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223532245|gb|EEF34049.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 389 bits (999), Expect = e-105
Identities = 224/450 (49%), Positives = 254/450 (56%), Gaps = 6/450 (1%)
Frame = -1
Query: 1779 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 1600
MDSDQGKLFIGGISW+T EDKLK++F YGDV+ T VMR+K TG+PRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNIL 60
Query: 1599 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 1420
DRVL+DKH IDGRTV+AK+A SRE+QQ + +R+GN N NSG+GGNIRTKKIFVGGLP
Sbjct: 61 DRVLQDKHTIDGRTVEAKKALSREEQQTN--ARSGNLNPPRNSGSGGNIRTKKIFVGGLP 118
Query: 1419 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 1240
P LT+++FRQYFE+YG VTDVV+MYDQNT RPRGFGFISFD EDAVDRVLHK+FHDLNGK
Sbjct: 119 PALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGK 178
Query: 1239 QVEVKRALPKDANP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDGRMDSSRY 1072
QVEVKRALPKDANP Y+GR+DS+RY
Sbjct: 179 QVEVKRALPKDANPGGGNRSMGGGGNIGGGGGGGAGGYQGYGASGGNASSYEGRIDSNRY 238
Query: 1071 MQPQSAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 892
MQ Q G FPPYGSS YS P
Sbjct: 239 MQSQGTGGSFPPYGSSGYSGPGYGYGPANNGVGYGGYGSYGGAGAGYGGPAGAAYGNPAV 298
Query: 891 XXXXXXXXXXXXPRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 712
PRSSW +QAPSGYG+MGY
Sbjct: 299 PNAGYASGPPGAPRSSWSSQAPSGYGAMGY-GNAASWGANTGAGSGGPGSAPAGQSPSGS 357
Query: 711 XXXXXXXXXXXXXXXXXXXGSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXX 532
+P+ Y AVGGR+G APNSN
Sbjct: 358 AGYGNQGYGYGSYGGNDGSYGNPAGYSAVGGRSGGAPNSNV----GAGGELQGSGGGYMG 413
Query: 531 XXXGDANGNSGYGNASWRSE--QASGNYGT 448
GDANGN GYG A WRS+ QASGNYGT
Sbjct: 414 SDYGDANGNPGYGTAGWRSDPSQASGNYGT 443