BLASTX nr result

ID: Glycyrrhiza23_contig00002362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002362
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626258.1| Histone H2A [Medicago truncatula] gi|1243600...   152   4e-35
ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370...   151   9e-35
ref|XP_003554652.1| PREDICTED: probable histone H2A.5 [Glycine max]   150   2e-34
ref|XP_002512417.1| histone h2a, putative [Ricinus communis] gi|...   149   3e-34
ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666...   148   6e-34

>ref|XP_003626258.1| Histone H2A [Medicago truncatula] gi|124360019|gb|ABN08035.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501273|gb|AES82476.1| Histone H2A [Medicago
           truncatula]
          Length = 144

 Score =  152 bits (384), Expect = 4e-35
 Identities = 78/98 (79%), Positives = 81/98 (82%)
 Frame = -3

Query: 424 KAGLQFPVGRVARFMKKGRYSQRLGTGAPIXXXXXXXXXXXXXXXXAGNAARDNKKNRIN 245
           KAGLQFPVGR+ARFMKKGRYSQR+GTGAPI                AGNAARDNKKNRIN
Sbjct: 32  KAGLQFPVGRIARFMKKGRYSQRVGTGAPIYLAAVLEYLAAEVLELAGNAARDNKKNRIN 91

Query: 244 PRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 131
           PRHV LAVRND+ELGKLLQGVTIASGGVLPNINPVLLP
Sbjct: 92  PRHVCLAVRNDDELGKLLQGVTIASGGVLPNINPVLLP 129


>ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370|gb|EEE94917.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  151 bits (381), Expect = 9e-35
 Identities = 76/98 (77%), Positives = 82/98 (83%)
 Frame = -3

Query: 424 KAGLQFPVGRVARFMKKGRYSQRLGTGAPIXXXXXXXXXXXXXXXXAGNAARDNKKNRIN 245
           KAGLQFPVGR+ARF+KKGRY+QR+G+GAPI                AGNAARDNKKNRIN
Sbjct: 24  KAGLQFPVGRIARFLKKGRYAQRVGSGAPIYMAAVLEYLAAEVLELAGNAARDNKKNRIN 83

Query: 244 PRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 131
           PRHVLLA+RNDEELGKLLQGVTIASGGVLPNINPVLLP
Sbjct: 84  PRHVLLAIRNDEELGKLLQGVTIASGGVLPNINPVLLP 121


>ref|XP_003554652.1| PREDICTED: probable histone H2A.5 [Glycine max]
          Length = 144

 Score =  150 bits (379), Expect = 2e-34
 Identities = 77/99 (77%), Positives = 82/99 (82%)
 Frame = -3

Query: 427 LKAGLQFPVGRVARFMKKGRYSQRLGTGAPIXXXXXXXXXXXXXXXXAGNAARDNKKNRI 248
           +KAGLQFPV RVAR++KKGRYS+RLGTGAPI                AGNAARDNKKNRI
Sbjct: 23  IKAGLQFPVSRVARYLKKGRYSRRLGTGAPIYLAAVLEYLAAEVLELAGNAARDNKKNRI 82

Query: 247 NPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 131
           NPRHVLLAVRND+ELGKLLQGVTIASGGVLPNINPVLLP
Sbjct: 83  NPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLLP 121


>ref|XP_002512417.1| histone h2a, putative [Ricinus communis]
           gi|223548378|gb|EEF49869.1| histone h2a, putative
           [Ricinus communis]
          Length = 146

 Score =  149 bits (376), Expect = 3e-34
 Identities = 75/99 (75%), Positives = 81/99 (81%)
 Frame = -3

Query: 427 LKAGLQFPVGRVARFMKKGRYSQRLGTGAPIXXXXXXXXXXXXXXXXAGNAARDNKKNRI 248
           +KAGLQFPVGR+ARF+KKGRY+QR G+GAP+                AGNAARDNKKNRI
Sbjct: 26  VKAGLQFPVGRIARFLKKGRYAQRFGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 85

Query: 247 NPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 131
           NPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLP
Sbjct: 86  NPRHVLLAVRNDEELGKLLHGVTIASGGVLPNINPVLLP 124


>ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666|gb|EEF08797.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  148 bits (374), Expect = 6e-34
 Identities = 75/99 (75%), Positives = 82/99 (82%)
 Frame = -3

Query: 427 LKAGLQFPVGRVARFMKKGRYSQRLGTGAPIXXXXXXXXXXXXXXXXAGNAARDNKKNRI 248
           +KAGLQFPVGR++RF+KKGRY++RLG+GAPI                AGNAARDNKK RI
Sbjct: 23  IKAGLQFPVGRISRFLKKGRYAKRLGSGAPIYMAAVLEYLAAEVLELAGNAARDNKKTRI 82

Query: 247 NPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 131
           NPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP
Sbjct: 83  NPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 121


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