BLASTX nr result

ID: Glycyrrhiza23_contig00002352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002352
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatul...   402   e-109
gb|ACJ85252.1| unknown [Medicago truncatula]                          400   e-109
ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   397   e-108
ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycin...   384   e-104
gb|AFK37653.1| unknown [Lotus japonicus]                              363   4e-98

>ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
            gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein
            [Medicago truncatula] gi|388503166|gb|AFK39649.1| unknown
            [Medicago truncatula]
          Length = 280

 Score =  402 bits (1032), Expect = e-109
 Identities = 218/285 (76%), Positives = 239/285 (83%), Gaps = 15/285 (5%)
 Frame = -1

Query: 1378 MSTTAASLALPTLQTRKPLCSSPQCLSS--RFSLNPNFKPFSIPSASLRPTLSLSCRFVS 1205
            MST+A SL LP+L T+    +SPQC SS    SLNPNFKPFS  S SLRP+LS+S RF+S
Sbjct: 1    MSTSATSLVLPSLFTK----NSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFIS 56

Query: 1204 RVALSSEFDQEEDTFSDGD-TPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 1028
            RVA+SSEFDQEEDTF DGD TP+YS + RLFVGNLPFSVDSAQLAE+FENAG+VEMVEVI
Sbjct: 57   RVAVSSEFDQEEDTFDDGDDTPSYSPNQRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVI 116

Query: 1027 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAG-PPPPRTENSRFG--- 860
            YDK TGRSRGFGFVTMSSA EVEAAAQQ NGY +DGR LRVNAG PPPPR+ENSRFG   
Sbjct: 117  YDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENP 176

Query: 859  --------GPSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGR 704
                    GP RG S SD +NRVHVGNLAWGVDNLALESLF EQG+V+EAKVIYDRESGR
Sbjct: 177  RFGGDRPRGPPRGGS-SDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235

Query: 703  SRGFGFVTFSSPDEVNSAIQSLDGVDLNGRAIRVSLADGKPKRQF 569
            SRGFGFVTFSS DEV+SAI++LDG DLNGRAIRVS AD +PKRQF
Sbjct: 236  SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>gb|ACJ85252.1| unknown [Medicago truncatula]
          Length = 280

 Score =  400 bits (1027), Expect = e-109
 Identities = 217/285 (76%), Positives = 239/285 (83%), Gaps = 15/285 (5%)
 Frame = -1

Query: 1378 MSTTAASLALPTLQTRKPLCSSPQCLSS--RFSLNPNFKPFSIPSASLRPTLSLSCRFVS 1205
            MST+A SL LP+L T+    +SPQC SS    SLNPNFKPFS  S SLRP+LS+S RF+S
Sbjct: 1    MSTSATSLVLPSLFTK----NSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFIS 56

Query: 1204 RVALSSEFDQEEDTFSDGD-TPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 1028
            RVA+SSEFDQEEDTF DGD TP+YS + RLFVG+LPFSVDSAQLAE+FENAG+VEMVEVI
Sbjct: 57   RVAVSSEFDQEEDTFDDGDDTPSYSPNQRLFVGSLPFSVDSAQLAEIFENAGDVEMVEVI 116

Query: 1027 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAG-PPPPRTENSRFG--- 860
            YDK TGRSRGFGFVTMSSA EVEAAAQQ NGY +DGR LRVNAG PPPPR+ENSRFG   
Sbjct: 117  YDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENP 176

Query: 859  --------GPSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGR 704
                    GP RG S SD +NRVHVGNLAWGVDNLALESLF EQG+V+EAKVIYDRESGR
Sbjct: 177  RFGGDRPRGPPRGGS-SDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235

Query: 703  SRGFGFVTFSSPDEVNSAIQSLDGVDLNGRAIRVSLADGKPKRQF 569
            SRGFGFVTFSS DEV+SAI++LDG DLNGRAIRVS AD +PKRQF
Sbjct: 236  SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 275

 Score =  397 bits (1019), Expect = e-108
 Identities = 210/275 (76%), Positives = 233/275 (84%), Gaps = 7/275 (2%)
 Frame = -1

Query: 1378 MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLSLSCRFVS 1205
            MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI +  L+PT   S RFV 
Sbjct: 1    MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNNKPISISAVFLKPTTLSSSRFVP 59

Query: 1204 RVALSSEFDQEEDTFSDGDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVIY 1025
             V +SS+  QEEDTFSDGD P++S DL+LFVGNLPF+VDSAQLAELFE+AGNVE+VEVIY
Sbjct: 60   HVVVSSDLGQEEDTFSDGDGPSFSPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIY 119

Query: 1024 DKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPPPRTENS-RFGG--- 857
            DK TGRSRGFGFVTMSS  E EAAAQQFNGYELDGR LRVN+GPPP R E++ RF G   
Sbjct: 120  DKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSS 179

Query: 856  -PSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGRSRGFGFVT 680
              SRG  PSD+ENRVHV NLAWGVDN+AL+SLFREQG V+EA+VIYDRESGRSRGFGFVT
Sbjct: 180  FGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVT 239

Query: 679  FSSPDEVNSAIQSLDGVDLNGRAIRVSLADGKPKR 575
            FSSPDEVNSAIQSL+GVDLNGRAIRVSLAD KPK+
Sbjct: 240  FSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 274


>ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
            gi|255639723|gb|ACU20155.1| unknown [Glycine max]
          Length = 279

 Score =  384 bits (987), Expect = e-104
 Identities = 211/282 (74%), Positives = 234/282 (82%), Gaps = 14/282 (4%)
 Frame = -1

Query: 1378 MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLS------L 1223
            MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI +  L+ TLS      L
Sbjct: 1    MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISISAVFLKTTLSSSSPLSL 59

Query: 1222 SCRFVSRVALSSEFDQEEDTFSDGDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVE 1043
            S RFV  V++    +QEEDTF DGD P++SRDL+LFVGNLPFSVDSA+LAELFE+AGNVE
Sbjct: 60   SSRFVPHVSV---LEQEEDTFGDGDGPSFSRDLKLFVGNLPFSVDSARLAELFESAGNVE 116

Query: 1042 MVEVIYDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPPPRTENS-R 866
            +VEVIYDK TGRSRGFGFVTMSS  E EAAA+QFNGYELDGR LRVN+GPPP R E++ R
Sbjct: 117  VVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARNESAPR 176

Query: 865  FGG----PSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQG-KVVEAKVIYDRESGRS 701
            F G     SRG  PSD+ENRVHVGNLAWGVD++ALESLFREQG KV+EA+VIYDRESGRS
Sbjct: 177  FRGGSSFGSRGGGPSDSENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRS 236

Query: 700  RGFGFVTFSSPDEVNSAIQSLDGVDLNGRAIRVSLADGKPKR 575
            RGFGFVTF SPDEV SAIQSLDGVDLNGRAIRVSLAD KPKR
Sbjct: 237  RGFGFVTFGSPDEVKSAIQSLDGVDLNGRAIRVSLADSKPKR 278


>gb|AFK37653.1| unknown [Lotus japonicus]
          Length = 302

 Score =  363 bits (933), Expect = 4e-98
 Identities = 209/303 (68%), Positives = 232/303 (76%), Gaps = 33/303 (10%)
 Frame = -1

Query: 1378 MSTTAA-SLALPTLQTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLSLSC-RFVS 1205
            MSTT+A SLALP LQTR+PL SS Q LSS F LNPNFK  SI +  L  TLSLS  RFV+
Sbjct: 1    MSTTSATSLALPILQTRQPLGSS-QRLSSSFCLNPNFKSISISAVFLPSTLSLSSSRFVT 59

Query: 1204 RVALSSEFDQEEDTFSD-GDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 1028
            RVA+SSEFDQEEDTFSD  +T +++ D ++FVGNLPFSVDSAQLAELF++AGNVE+VEVI
Sbjct: 60   RVAVSSEFDQEEDTFSDDAETRSFAPDHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVI 119

Query: 1027 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPP----------PRT 878
            YDK TG SRGF FVTMSSA E E AAQQFN YEL+GR LRVN+GPPP          PR 
Sbjct: 120  YDKTTGNSRGFAFVTMSSAAEAEVAAQQFNNYELEGRALRVNSGPPPKNENRGFNENPRF 179

Query: 877  ENSRF----------------GGPSRGR----SPSDNENRVHVGNLAWGVDNLALESLFR 758
             N+ F                GG S G     S S +ENRVHVGNLAWGVDN ALESLFR
Sbjct: 180  RNNSFNRGGSDSYRGGSDGYRGGGSDGYRGGGSSSYSENRVHVGNLAWGVDNAALESLFR 239

Query: 757  EQGKVVEAKVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLDGVDLNGRAIRVSLADGKPK 578
            EQG+VV+AKVIYDRESGRSRGFGFVTFSSPDEVNSAI+SLDG DLNGRAI+VS AD KPK
Sbjct: 240  EQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSKPK 299

Query: 577  RQF 569
            R+F
Sbjct: 300  REF 302


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