BLASTX nr result

ID: Glycyrrhiza23_contig00002310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002310
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|35547...   566   e-159
ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...   543   e-152
ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Gly...   513   e-143
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   459   e-126
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   459   e-126

>ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|355478105|gb|AES59308.1| F-box
            protein [Medicago truncatula]
          Length = 496

 Score =  566 bits (1458), Expect = e-159
 Identities = 298/482 (61%), Positives = 330/482 (68%), Gaps = 37/482 (7%)
 Frame = +1

Query: 148  FSDFPEDVQLCILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWG 327
            F+DFPEDVQLCILSFL P EIA+FACTSK+F +LC++DAKLW +LCDRRWGSKTQI KWG
Sbjct: 16   FTDFPEDVQLCILSFLCPIEIASFACTSKQFGTLCSDDAKLWLSLCDRRWGSKTQIKKWG 75

Query: 328  KGKIPYRHLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPAT 507
            +GKI YR+LY  LHE+DNLIGFWRRSG GSA I SPSL+ FEWG SF++ SRVSP+Q  +
Sbjct: 76   EGKILYRNLYTVLHEWDNLIGFWRRSGPGSAVIESPSLVFFEWGSSFIAGSRVSPTQSES 135

Query: 508  ----YHVTKTPFLNMSLSEEGHAVNLLDPDGTRPDLNLNLDESELMIPVSVSFMGKTHFV 675
                Y V K PFL M LSE+G  VNLLDP+G R DLN N + SEL IPV+V FMGKTHFV
Sbjct: 136  EICGYQVKKVPFLKMGLSEDGQIVNLLDPNG-RADLNFNGNGSEL-IPVNVCFMGKTHFV 193

Query: 676  LEEDRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTSPG 855
            LEE+ FGR                                 P   M EIYQ+ ANR SPG
Sbjct: 194  LEENVFGRSSSSSPGKNGGEDCGFGGEDGIGIESGS-----PPDRMLEIYQHLANRVSPG 248

Query: 856  SDXXXXXXXXXXXXXXXX-WEPEHFVKIVNCSPTPSRPLQGLWK---------------- 984
            SD                 WEPEHFVK+VNCSPT  RPLQGLWK                
Sbjct: 249  SDRSRRQRRKEKERMARRKWEPEHFVKVVNCSPTALRPLQGLWKVFLICSLLFMLNYVFS 308

Query: 985  ----------------GICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNARVFWASN 1116
                            GICAD+SLAFYLVAYDDIGGI CR+LGDPPERFS+ A VFW SN
Sbjct: 309  VENYNLIALVLGICHLGICADLSLAFYLVAYDDIGGIACRRLGDPPERFSTYAPVFWTSN 368

Query: 1117 ATXXXXXXXXXXXXXYDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSDNEVVNQI 1296
            AT             Y SR+HL+P QPHNE HEQFP SD EGVN IQQ +LSDNEVVN+I
Sbjct: 369  ATFLEAPFPLEEESLYGSRVHLQPVQPHNENHEQFPMSDVEGVNHIQQFYLSDNEVVNRI 428

Query: 1297 LHISSSYDLVIPDLAGTMNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVRDGCIVDT 1476
            LHI+SSYDLVIPDLAG  NPRSAEGRIWQYQDGTFGFGF+RDNFVIDMK+IVRDGCIVD 
Sbjct: 429  LHINSSYDLVIPDLAGATNPRSAEGRIWQYQDGTFGFGFVRDNFVIDMKNIVRDGCIVDA 488

Query: 1477 VN 1482
            VN
Sbjct: 489  VN 490


>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score =  543 bits (1400), Expect = e-152
 Identities = 284/464 (61%), Positives = 326/464 (70%), Gaps = 8/464 (1%)
 Frame = +1

Query: 115  LTDNXXXXXLCFSDFPEDVQLCILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRR 294
            + +N       F+DFPED+Q+CILSFLGP EIAT ACTSKR  SLCA D+KLWF++C+RR
Sbjct: 1    MANNEKDACSSFTDFPEDIQVCILSFLGPPEIATLACTSKRMGSLCATDSKLWFSMCERR 60

Query: 295  WGSKTQISKWGKGKIP---YRHLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPS 465
            WGS T+I++W +GK P   ++HLYNTLH ++NL+GFWRRSG G      PSLL FEWGPS
Sbjct: 61   WGSYTRITQWAQGKNPTLSFKHLYNTLHRWENLLGFWRRSGTGI-----PSLLFFEWGPS 115

Query: 466  FLSASRVSPS----QPATYHVTKTPFLNMSLSEEGHAVNLLDPDGTRPDLNLNLDESELM 633
            F+SASRVSPS       TY VTKTPFL MSLSEEGH V  LDPDG R D    +  SEL 
Sbjct: 116  FISASRVSPSASDSNSVTYGVTKTPFLWMSLSEEGHVVTYLDPDG-RSDFKPEI-RSEL- 172

Query: 634  IPVSVSFMGKTHFVLEEDRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLM 813
            + V VSFMGKTH V+EE R                                    P++LM
Sbjct: 173  VAVDVSFMGKTHLVVEEKRVRGGACHDCGDDVVVVESGSP---------------PEKLM 217

Query: 814  TEIYQYFANRTSPGSDXXXXXXXXXXXXXXXX-WEPEHFVKIVNCSPTPSRPLQGLWKGI 990
             EIYQ+FAN  SPGSD                 WEP+HFVKIVNCSPTP+RPLQGLWKGI
Sbjct: 218  AEIYQHFANPRSPGSDRSRRQRRREKERLAGRKWEPQHFVKIVNCSPTPARPLQGLWKGI 277

Query: 991  CADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNARVFWASNATXXXXXXXXXXXXXYDS 1170
            C DMSLAFYLV YDDIGGI CR++GDPP+RFS +A VFW SNAT             YDS
Sbjct: 278  CGDMSLAFYLVGYDDIGGIACRRIGDPPDRFSGHAPVFWTSNATFLESPFSPEEESLYDS 337

Query: 1171 RIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSDNEVVNQILHISSSYDLVIPDLAGTM 1350
            R+HLRP QP NE+ EQFPFSD E VN+IQQ  LSDN VV++ILHISSSYDLV+PDLAGT+
Sbjct: 338  RVHLRPLQPGNEVLEQFPFSDSEVVNQIQQFQLSDN-VVDRILHISSSYDLVVPDLAGTL 396

Query: 1351 NPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVRDGCIVDTVN 1482
            NPRSAEGRIWQY++GTFGFGF+ DNFVIDMKHIV +GCIVDTVN
Sbjct: 397  NPRSAEGRIWQYRNGTFGFGFLSDNFVIDMKHIVHNGCIVDTVN 440


>ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 435

 Score =  513 bits (1322), Expect = e-143
 Identities = 272/449 (60%), Positives = 312/449 (69%), Gaps = 4/449 (0%)
 Frame = +1

Query: 148  FSDFPEDVQLCILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWG 327
            F+DFPED+Q+ ILSFLGP+EIAT ACTSK+  SLC+  +KLWF++C+RRWGS T+I++W 
Sbjct: 11   FTDFPEDIQVSILSFLGPSEIATLACTSKKLGSLCSTVSKLWFSMCERRWGSNTRITQWA 70

Query: 328  -KGKIPYRHLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPA 504
             K  I ++ LY+TLH ++NL+GFWRRSG G      PSLL FEWGPSF+SASRVSPS   
Sbjct: 71   QKPAISFKQLYHTLHRWENLLGFWRRSGTGI-----PSLLFFEWGPSFISASRVSPSDSD 125

Query: 505  --TYHVTKTPFLNMSLSEEGHAVNLLDPDGTRPDLNLNLDESELMIPVSVSFMGKTHFVL 678
              TY VTKTPFL MSLSEEGH V  LDPDG R D     + SEL + V VSFMGKTHFV+
Sbjct: 126  SNTYGVTKTPFLWMSLSEEGHVVTFLDPDGRRSDFKPE-NRSEL-VAVDVSFMGKTHFVV 183

Query: 679  EEDRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTSPGS 858
            EE R                                    P++LM EIYQ+FAN  SPGS
Sbjct: 184  EEKRVRGGDDDVVVAESGSP--------------------PERLMAEIYQHFANPRSPGS 223

Query: 859  DXXXXXXXXXXXXXXXX-WEPEHFVKIVNCSPTPSRPLQGLWKGICADMSLAFYLVAYDD 1035
            D                 WEP+HFVKIVNCSPTP+RPLQGLWKGIC DMSLAFYLVAYDD
Sbjct: 224  DRSRRQRRREKERLYGRKWEPQHFVKIVNCSPTPARPLQGLWKGICGDMSLAFYLVAYDD 283

Query: 1036 IGGITCRQLGDPPERFSSNARVFWASNATXXXXXXXXXXXXXYDSRIHLRPPQPHNEIHE 1215
            IGGI CR +GDPP+ FS  A VFW SNAT             YDSR+HL+P Q  NE+ E
Sbjct: 284  IGGIACRWIGDPPDHFSGQAPVFWTSNATFLESPFSPEEESLYDSRVHLQPLQLGNEVLE 343

Query: 1216 QFPFSDDEGVNRIQQAHLSDNEVVNQILHISSSYDLVIPDLAGTMNPRSAEGRIWQYQDG 1395
            QFP SD E VN+IQQ  LS N VVN+I HISSSYDLV+P LAGTMN RSAEGRIWQY++G
Sbjct: 344  QFPLSDCELVNQIQQFQLSGN-VVNRIHHISSSYDLVVPGLAGTMNRRSAEGRIWQYRNG 402

Query: 1396 TFGFGFIRDNFVIDMKHIVRDGCIVDTVN 1482
            TFGFGF+ DNFVIDMKHIV +GCIVDTVN
Sbjct: 403  TFGFGFLSDNFVIDMKHIVHNGCIVDTVN 431


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
            gi|449482721|ref|XP_004156384.1| PREDICTED: F-box protein
            At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  459 bits (1181), Expect = e-126
 Identities = 243/467 (52%), Positives = 299/467 (64%), Gaps = 23/467 (4%)
 Frame = +1

Query: 148  FSDFPEDVQLCILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWG 327
            F+DFPEDVQLCILSFL P++IATF+CTSKRF SLC ND KLWFT+CDR+WGSKTQI  WG
Sbjct: 16   FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75

Query: 328  KGKIPYRHLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPAT 507
            KGKI YR LY TLH+++NLIGFWRRSG  + +++SP L+ FEWGP FL+  RVSPS+  T
Sbjct: 76   KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGT 135

Query: 508  YHVTKTPFLNMSLSEEGHAVNLLDPDGTRPDLN--LNLDESEL----MIPVSVSFMGKTH 669
            Y V K+PFL M+LS EG A++ ++ DG         +L ES+     +IP+ +SFMGK H
Sbjct: 136  YDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195

Query: 670  FVLEEDR--------------FGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQ 807
            FV+EE+               F R                                LPD+
Sbjct: 196  FVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGS---LPDR 252

Query: 808  LMTEIYQYFANRTSPGSDXXXXXXXXXXXXXXXX--WEPEHFVKIVNCSPTPSRPLQGLW 981
            LM+EIYQ+FANRTSPG D                  WEPEHFVKIVNCSPTP RPLQGLW
Sbjct: 253  LMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNCSPTPLRPLQGLW 312

Query: 982  KGICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNARVFWASNATXXXXXXXXXXXXX 1161
            KGI  D+S+ FYLV YDDIGGI CR++GD  ER SS A VFW SN T             
Sbjct: 313  KGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTFLEAPFSVEEEYL 372

Query: 1162 YDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSDNEVVNQILHISSSYDLVIPDLA 1341
            +D RIH++ P   N+I E  P  +++ ++R              IL ++SSYDLV+PDLA
Sbjct: 373  HDCRIHVQ-PLAANDIDELVPSIENKNISR--------------ILCVNSSYDLVLPDLA 417

Query: 1342 GTM-NPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVRDGCIVDTV 1479
            G+  NPR+ EGRIWQY +GTFGFGF+RDNF+ID+KH+ R+G IVDTV
Sbjct: 418  GSAPNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTV 464


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  459 bits (1180), Expect = e-126
 Identities = 245/464 (52%), Positives = 288/464 (62%), Gaps = 20/464 (4%)
 Frame = +1

Query: 148  FSDFPEDVQLCILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWG 327
            FSDFPEDVQLCILSFL P+EIATFACTSKRF SLC  D+KLWFTLCDRRWGSKTQI KWG
Sbjct: 14   FSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSKTQIKKWG 73

Query: 328  KGKIPYRHLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPAT 507
             GKI YR LY TL E++NLIGFWRRSG  +  ++SP L+ FEW PSF+  SRVSPS+  T
Sbjct: 74   SGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIGSRVSPSRLGT 133

Query: 508  YHVTKTPFLNMSLSEEGHAVNLLDPDGTRPD-------LNLNLDESELMIPVSVSFMGKT 666
            YHV K PFL MS++ EG  +N LDPDG           +     E++L IPV VSFMGK 
Sbjct: 134  YHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDL-IPVHVSFMGKN 192

Query: 667  HFVLEE----------DRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMT 816
            H V+EE          +                                    LPD+ M+
Sbjct: 193  HVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSPGSLPDRFMS 252

Query: 817  EIYQYFANRTSPGSD--XXXXXXXXXXXXXXXXWEPEHFVKIVNCSPTPSRPLQGLWKGI 990
            EIYQYFANRTSPG +                  W PEHFVKIVNCSPTPSRPLQGLWKGI
Sbjct: 253  EIYQYFANRTSPGGERASRRQRKREKARQGRRKWMPEHFVKIVNCSPTPSRPLQGLWKGI 312

Query: 991  CADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNARVFWASNATXXXXXXXXXXXXXYDS 1170
              D +L F+LVAYDDIGGI CR +GD  +  S  + VFW S  T             YDS
Sbjct: 313  SDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYSPVFWTSKTTFLEAPFSPEEEYLYDS 372

Query: 1171 RIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSDNEVVNQILHISSSYDLVIPDLAGT- 1347
            RIHLRP    + IHE  P              L++NEVV+ IL I+SSYDLVIPDLAGT 
Sbjct: 373  RIHLRPLATADHIHEHHP--------------LTENEVVSHILCINSSYDLVIPDLAGTS 418

Query: 1348 MNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVRDGCIVDTV 1479
             NPR  EGRIW Y+ GTFGFGF+R++F++D+KHI + GC+++ +
Sbjct: 419  ANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIAQHGCLLEAM 462


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