BLASTX nr result

ID: Glycyrrhiza23_contig00002239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002239
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast...   235   3e-60
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast...   234   5e-60
gb|ACN40058.1| unknown [Picea sitchensis]                             233   9e-60
gb|ABK25030.1| unknown [Picea sitchensis]                             233   9e-60
sp|O24310.1|EFTU_PEA RecName: Full=Elongation factor Tu, chlorop...   233   1e-59

>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis
           vinifera]
          Length = 486

 Score =  235 bits (599), Expect = 3e-60
 Identities = 119/143 (83%), Positives = 121/143 (84%)
 Frame = +3

Query: 3   YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 182
           YDEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 124 YDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 183

Query: 183 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGD 362
           SGADGPMPQTKEHILLAKQVGVPNMVVFLNK                     SSYEFPGD
Sbjct: 184 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGD 243

Query: 363 DVPIVSGSALLALEALMANPSLK 431
           DVPI+SGSALLALEALMANPS+K
Sbjct: 244 DVPIISGSALLALEALMANPSIK 266


>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488736|ref|XP_003633809.1|
           PREDICTED: elongation factor Tu, chloroplastic-like
           isoform 2 [Vitis vinifera]
           gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
           factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
          Length = 487

 Score =  234 bits (597), Expect = 5e-60
 Identities = 118/143 (82%), Positives = 122/143 (85%)
 Frame = +3

Query: 3   YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 182
           YDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 125 YDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 184

Query: 183 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGD 362
           SGADGPMPQTKEHILLAKQVGVPNMVVFLNK                     +SYEFPGD
Sbjct: 185 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLASYEFPGD 244

Query: 363 DVPIVSGSALLALEALMANPSLK 431
           D+PIVSGSALLALEALMANPS+K
Sbjct: 245 DIPIVSGSALLALEALMANPSIK 267


>gb|ACN40058.1| unknown [Picea sitchensis]
          Length = 446

 Score =  233 bits (595), Expect = 9e-60
 Identities = 118/143 (82%), Positives = 121/143 (84%)
 Frame = +3

Query: 3   YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 182
           YDEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 128 YDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 187

Query: 183 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGD 362
           SGADGPMPQTKEHILLAKQVGVPN+VVFLNK                     SSYEFPGD
Sbjct: 188 SGADGPMPQTKEHILLAKQVGVPNVVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGD 247

Query: 363 DVPIVSGSALLALEALMANPSLK 431
           DVPI+SGSALLALEALMANPS+K
Sbjct: 248 DVPIISGSALLALEALMANPSIK 270


>gb|ABK25030.1| unknown [Picea sitchensis]
          Length = 490

 Score =  233 bits (595), Expect = 9e-60
 Identities = 118/143 (82%), Positives = 121/143 (84%)
 Frame = +3

Query: 3   YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 182
           YDEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 128 YDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 187

Query: 183 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGD 362
           SGADGPMPQTKEHILLAKQVGVPN+VVFLNK                     SSYEFPGD
Sbjct: 188 SGADGPMPQTKEHILLAKQVGVPNVVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGD 247

Query: 363 DVPIVSGSALLALEALMANPSLK 431
           DVPI+SGSALLALEALMANPS+K
Sbjct: 248 DVPIISGSALLALEALMANPSIK 270


>sp|O24310.1|EFTU_PEA RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
           Flags: Precursor gi|2330655|emb|CAA74893.1| choloroplast
           translation elongation factor [Pisum sativum]
           gi|20070084|gb|AAM01198.1| translation elongation factor
           [Pisum sativum]
          Length = 488

 Score =  233 bits (594), Expect = 1e-59
 Identities = 118/143 (82%), Positives = 122/143 (85%)
 Frame = +3

Query: 3   YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 182
           YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 126 YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 185

Query: 183 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGD 362
           SGADGPMPQTKEHILLAKQVGVP++VVFLNK                     SSYEFPGD
Sbjct: 186 SGADGPMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGD 245

Query: 363 DVPIVSGSALLALEALMANPSLK 431
           D+PIVSGSALLALEALMANP+LK
Sbjct: 246 DIPIVSGSALLALEALMANPTLK 268


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