BLASTX nr result

ID: Glycyrrhiza23_contig00002188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002188
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   275   1e-71
gb|ACU23746.1| unknown [Glycine max]                                  275   1e-71
ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   273   4e-71
ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   273   4e-71
ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   273   4e-71

>ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 309

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/174 (80%), Positives = 141/174 (81%)
 Frame = -3

Query: 797 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 618
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 617 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVLVTGLPSSAS 438
           YDFDGHRLRVEPA                                SE+RVLVTGLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSAS 123

Query: 437 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 276
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>gb|ACU23746.1| unknown [Glycine max]
          Length = 310

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/174 (80%), Positives = 141/174 (81%)
 Frame = -3

Query: 797 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 618
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 617 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVLVTGLPSSAS 438
           YDFDGHRLRVEPA                                SE+RVLVTGLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPSSAS 123

Query: 437 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 276
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
           [Glycine max]
          Length = 326

 Score =  273 bits (699), Expect = 4e-71
 Identities = 139/174 (79%), Positives = 141/174 (81%)
 Frame = -3

Query: 797 TVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 618
           TVYVGNLPGDIREREVEDLFLKYG ITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG
Sbjct: 8   TVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDG 67

Query: 617 YDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFRVLVTGLPSSAS 438
           YDFDGHRLRVEPA                                SE+RVLV+GLPSSAS
Sbjct: 68  YDFDGHRLRVEPA----HGGRGHSSSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPSSAS 123

Query: 437 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 276
           WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF
Sbjct: 124 WQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAF 177


>ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 347

 Score =  273 bits (699), Expect = 4e-71
 Identities = 142/197 (72%), Positives = 145/197 (73%)
 Frame = -3

Query: 866 GNATDPQFPHXXXXXXXXXXXXRTVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRP 687
           GN TD  FP             RTVYVGNLPGDIREREVEDLF+KYG ITHIDLKVPPRP
Sbjct: 11  GNTTDLNFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP 70

Query: 686 PGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXX 507
           PGYAFVEFED QDAEDAIRGRDGYDFDGHRLRVE A                        
Sbjct: 71  PGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAA----HGGRGNSSSRDRYSSHSNGR 126

Query: 506 XXXXXXXXSEFRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 327
                   SE+RV+V GLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD
Sbjct: 127 GGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 186

Query: 326 MKYAIKKLDDSEFRNAF 276
           MKYAIKKLDDSEFRNAF
Sbjct: 187 MKYAIKKLDDSEFRNAF 203


>ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 329

 Score =  273 bits (699), Expect = 4e-71
 Identities = 142/197 (72%), Positives = 145/197 (73%)
 Frame = -3

Query: 866 GNATDPQFPHXXXXXXXXXXXXRTVYVGNLPGDIREREVEDLFLKYGPITHIDLKVPPRP 687
           GN TD  FP             RTVYVGNLPGDIREREVEDLF+KYG ITHIDLKVPPRP
Sbjct: 11  GNTTDLNFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRP 70

Query: 686 PGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAXXXXXXXXXXXXXXXXXXXXXXXX 507
           PGYAFVEFED QDAEDAIRGRDGYDFDGHRLRVE A                        
Sbjct: 71  PGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAA----HGGRGNSSSRDRYSSHSNGR 126

Query: 506 XXXXXXXXSEFRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 327
                   SE+RV+V GLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD
Sbjct: 127 GGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDD 186

Query: 326 MKYAIKKLDDSEFRNAF 276
           MKYAIKKLDDSEFRNAF
Sbjct: 187 MKYAIKKLDDSEFRNAF 203


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