BLASTX nr result

ID: Glycyrrhiza23_contig00002187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00002187
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   647   0.0  
ref|XP_003531811.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   637   e-180
gb|AFK47453.1| unknown [Medicago truncatula]                          635   e-180
ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   580   e-163
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161

>ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 417

 Score =  647 bits (1670), Expect = 0.0
 Identities = 320/403 (79%), Positives = 352/403 (87%), Gaps = 1/403 (0%)
 Frame = +3

Query: 3    NVVEGRIPSTLSRTLSXXXXXXXXXXXXXXXVS-YEMHHGTGKLSTSTKEKYALIPDKFT 179
            NVVEGR+PS  ++TLS                +   ++ G+GKLS   KEKYALIPD FT
Sbjct: 16   NVVEGRVPSPKNKTLSPSPSLEPPLPREPPPAAAMSLNKGSGKLSA--KEKYALIPDNFT 73

Query: 180  SLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIGDTPNPYERAISIIG 359
            +LEQVT ALR EGLESSNL+LGIDFTKSNEWTG VSFNNRSLHAIG TPNPYE+AISIIG
Sbjct: 74   TLEQVTIALRKEGLESSNLVLGIDFTKSNEWTGSVSFNNRSLHAIGSTPNPYEKAISIIG 133

Query: 360  KTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLACYQKVVPNLRLSGPT 539
            KTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D+S CHGFEEVLACYQK+VPNLRLSGPT
Sbjct: 134  KTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDNSPCHGFEEVLACYQKIVPNLRLSGPT 193

Query: 540  SYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQEERTIKAIVDASSYP 719
            SYAPVIEAAIDIVEK+HGQFHVLVIVADGQVTT+A SEDGELSPQE RTIKAI DASSYP
Sbjct: 194  SYAPVIEAAIDIVEKSHGQFHVLVIVADGQVTTSAASEDGELSPQEARTIKAIADASSYP 253

Query: 720  LSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTSTSKKEAAFALAALME 899
            LSI+LVGVGDGPWEDM+KFDDKIPARDFDNFQFVNFTDIM+K +S S+KEAAFALAALME
Sbjct: 254  LSIILVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTDIMAKKSSPSEKEAAFALAALME 313

Query: 900  IPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHMPSSMEDERNQMVCD 1079
            IPFQ+KAA ELGLLGR TGR+ K+VPRPPP  YS+ V PA  LS+ P+ M+DERNQM C 
Sbjct: 314  IPFQYKAATELGLLGRATGRSNKIVPRPPPAPYSQLVPPARVLSNTPTFMDDERNQMACA 373

Query: 1080 ICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFA 1208
            ICLTNKKDLAFGCGHM+CRDCGSRL+DC ICR+RIT+RLRVF+
Sbjct: 374  ICLTNKKDLAFGCGHMTCRDCGSRLTDCPICRQRITNRLRVFS 416


>ref|XP_003531811.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 425

 Score =  637 bits (1643), Expect = e-180
 Identities = 318/409 (77%), Positives = 346/409 (84%), Gaps = 7/409 (1%)
 Frame = +3

Query: 3    NVVEGRIPSTLSRTLSXXXXXXXXXXXXXXXVSYE-------MHHGTGKLSTSTKEKYAL 161
            NVV+GR+PS   +TLS               +          M   TG    S KEKYAL
Sbjct: 16   NVVKGRVPSPKDKTLSSLQSPSSPSQSPSPSLEPPREPPPPVMFFNTGSGKLSAKEKYAL 75

Query: 162  IPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIGDTPNPYER 341
            IPD FT+LEQVTTALR EGLESSNL+LGIDFTKSNEWTG VSFNN+SLHAIG T NPYE+
Sbjct: 76   IPDNFTTLEQVTTALRKEGLESSNLVLGIDFTKSNEWTGSVSFNNKSLHAIGSTANPYEK 135

Query: 342  AISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLACYQKVVPNL 521
            AISIIGKTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D S CHGFEEVLACYQKVVPNL
Sbjct: 136  AISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLACYQKVVPNL 195

Query: 522  RLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQEERTIKAIV 701
            RLSGPTSYAPVIEAAIDIVEK+HGQFHVLVIVADGQVTT+A SE GELSPQE RTIKAIV
Sbjct: 196  RLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIVADGQVTTSAASEHGELSPQEARTIKAIV 255

Query: 702  DASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTSTSKKEAAFA 881
            DASSYPLSI+LVGVGDGPWEDM+KFDDKIPARDFDNFQFVNFTDIM+K +S S+KE AFA
Sbjct: 256  DASSYPLSIILVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTDIMTKKSSPSEKETAFA 315

Query: 882  LAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHMPSSMEDER 1061
            LAALMEIPFQ+KAAIEL LLGR TGR+ K+VPRPPP  YSR V PA  LS+MP+ M+DER
Sbjct: 316  LAALMEIPFQYKAAIELELLGRATGRSNKIVPRPPPAPYSRLVPPARVLSNMPTFMDDER 375

Query: 1062 NQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFA 1208
            NQM C ICLTNKKDLAFGCGHM+CRDCGSRL++C ICR+RIT+RLRVF+
Sbjct: 376  NQMACAICLTNKKDLAFGCGHMTCRDCGSRLTNCPICRQRITNRLRVFS 424


>gb|AFK47453.1| unknown [Medicago truncatula]
          Length = 407

 Score =  635 bits (1638), Expect = e-180
 Identities = 313/371 (84%), Positives = 338/371 (91%), Gaps = 2/371 (0%)
 Frame = +3

Query: 99   SYEMH-HGTGKLSTSTKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWT 275
            S+ +H HG  KL+T  KEKYALIPD FT+LEQVT+ALR+EGLESSNLILGIDFTKSNEWT
Sbjct: 37   SFNIHLHGKKKLAT--KEKYALIPDNFTTLEQVTSALRHEGLESSNLILGIDFTKSNEWT 94

Query: 276  GRVSFNNRSLHAIGDTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHA 455
            GR SFNN+SLH+IG TPNPYE+AISIIGKTLAPFDDDNLIPC GFGDATTHD EVFSFHA
Sbjct: 95   GRSSFNNKSLHSIGGTPNPYEKAISIIGKTLAPFDDDNLIPCLGFGDATTHDSEVFSFHA 154

Query: 456  DSSSCHGFEEVLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVT 635
            D SSCHGFEEVLACYQK+VPNL LSGPTSYAPVIEAA+DIVEKTHGQFHVLVIVADGQVT
Sbjct: 155  DDSSCHGFEEVLACYQKIVPNLSLSGPTSYAPVIEAAMDIVEKTHGQFHVLVIVADGQVT 214

Query: 636  TNAHSEDGELSPQEERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQ 815
               ++E G+LSPQEE+TIKAI DASSYPLSIVLVGVGDGPWEDM+KFDDK+PARDFDNFQ
Sbjct: 215  RYGNNESGKLSPQEEKTIKAIADASSYPLSIVLVGVGDGPWEDMKKFDDKLPARDFDNFQ 274

Query: 816  FVNFTDIMSKNTSTSKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVA 995
            FVNFTDIMSK  S S KEAAFALAALMEIPFQ+KAA+ELGLLGR TGRAKKMVPRPPP  
Sbjct: 275  FVNFTDIMSKKISPSAKEAAFALAALMEIPFQYKAALELGLLGRATGRAKKMVPRPPPAP 334

Query: 996  YSRPVRPAHFLSHMP-SSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHIC 1172
            YSR + P HFLS MP SSM+D+RNQM C ICLTNKKDLAFGCGHM+CRDCGSRLSDC IC
Sbjct: 335  YSRHMPPEHFLSRMPTSSMDDQRNQMECAICLTNKKDLAFGCGHMTCRDCGSRLSDCPIC 394

Query: 1173 RERITSRLRVF 1205
            R+RIT+RLRVF
Sbjct: 395  RQRITNRLRVF 405


>ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 451

 Score =  580 bits (1496), Expect = e-163
 Identities = 279/357 (78%), Positives = 316/357 (88%)
 Frame = +3

Query: 138  STKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIG 317
            S  +KYALI D F++LEQVTTALR EGLESSNLILGIDFTKSNEWTGR+SFN RSLHAIG
Sbjct: 98   SAAKKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIG 157

Query: 318  DTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLAC 497
             TPNPYE+AISIIGKTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D S  HGFEEVLAC
Sbjct: 158  STPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPYHGFEEVLAC 217

Query: 498  YQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQE 677
            YQK+VPNL+LSGPTSYAPVIEAAIDIVEK  GQFHVLVIVADGQVT +  + DGELSPQE
Sbjct: 218  YQKIVPNLKLSGPTSYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTSDGELSPQE 277

Query: 678  ERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTST 857
            E+TIKA+VDAS+YPL+IVLVGVGDGPWEDMRKFDDKIPARD+DNFQFVNFT+IMSKN S 
Sbjct: 278  EKTIKAVVDASAYPLAIVLVGVGDGPWEDMRKFDDKIPARDYDNFQFVNFTEIMSKNISP 337

Query: 858  SKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHM 1037
            S+KEAAFALAALMEIPFQ+KA +E G+LGR TGRAK++VP+PPPV YSRP        + 
Sbjct: 338  SEKEAAFALAALMEIPFQYKATMEFGILGRVTGRAKRIVPKPPPVPYSRPAPSI----NT 393

Query: 1038 PSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFA 1208
             +S  D++NQ  C +CLTN +DLAFGCGHM+CR+CG +L++C +CRERITSRLRV++
Sbjct: 394  AASSGDDQNQTACPVCLTNARDLAFGCGHMTCRECGHKLTNCPMCRERITSRLRVYS 450


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  574 bits (1479), Expect = e-161
 Identities = 274/357 (76%), Positives = 316/357 (88%)
 Frame = +3

Query: 138  STKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIG 317
            S K+KY+ IPD F+SLEQVTTALR  GLESSNL++GIDFTKSNEWTG+VSFNNRSLHAIG
Sbjct: 41   SIKQKYSFIPDNFSSLEQVTTALREAGLESSNLVVGIDFTKSNEWTGKVSFNNRSLHAIG 100

Query: 318  DTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLAC 497
            DTPNPYE+AISIIGKT+APFD+DNLIPCFGFGDATTHD EVFSFH+D S CHGFEEVLAC
Sbjct: 101  DTPNPYEKAISIIGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLAC 160

Query: 498  YQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQE 677
            Y+K+VPNLRLSGPTSY PVIEAAIDIVEK+ GQ+HVL+I+ADGQVT +  + DGE+SPQE
Sbjct: 161  YKKIVPNLRLSGPTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMSPQE 220

Query: 678  ERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTST 857
            E+TIKAIVDASSYPLSI+LVGVGDGPWEDM++FDDK+PAR+FDNFQFVNFT IMSKN + 
Sbjct: 221  EQTIKAIVDASSYPLSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFVNFTAIMSKNATI 280

Query: 858  SKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHM 1037
            S+KE AFALAALMEIP Q+KAA+E G++GR+ G+AKK+VPRPPPV YSR        +H+
Sbjct: 281  SEKETAFALAALMEIPLQYKAAVEFGIIGRSMGQAKKIVPRPPPVPYSRRPVLDREPTHV 340

Query: 1038 PSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFA 1208
             S + DER Q  C ICLTN+KDLAFGCGHM+CRDCGSR+S C ICR  ITSR+R+FA
Sbjct: 341  SSPVLDERTQ-ACPICLTNRKDLAFGCGHMTCRDCGSRVSSCPICRRPITSRIRLFA 396


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