BLASTX nr result

ID: Glycyrrhiza23_contig00001923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001923
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235488.1| uncharacterized protein LOC100527396 [Glycin...   307   3e-81
ref|XP_003539866.1| PREDICTED: uncharacterized protein LOC100499...   305   2e-80
ref|XP_003605920.1| Succinate dehydrogenase subunit [Medicago tr...   296   1e-77
gb|AFK40337.1| unknown [Lotus japonicus]                              264   3e-68
gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glyc...   250   5e-64

>ref|NP_001235488.1| uncharacterized protein LOC100527396 [Glycine max]
           gi|255632256|gb|ACU16486.1| unknown [Glycine max]
          Length = 244

 Score =  307 bits (787), Expect = 3e-81
 Identities = 168/227 (74%), Positives = 185/227 (81%), Gaps = 7/227 (3%)
 Frame = +3

Query: 225 AALHRTSP----PQIGA---LPQLFHRTTTPTAPSAGENPSREYMTGLPKVPANKLAGDS 383
           ++L RT P    PQIGA   LP LFHR T  T P A EN S   +TGLPKVPANKL  DS
Sbjct: 19  SSLSRTFPSLPRPQIGAISPLPDLFHRNTA-TMPFAKENASGGNLTGLPKVPANKLGSDS 77

Query: 384 NAINSLGYKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGP 563
           +A NS  YKA GL+TNVLAGARY S V AA+  M LGVN VMARSFER + A TLG+IG 
Sbjct: 78  DATNSSRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGH 137

Query: 564 RRFMSDIPSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYM 743
           + FMSDIPSKTSETNPSGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VIL+FYMIYM
Sbjct: 138 KCFMSDIPSKTSETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYM 197

Query: 744 KMGLISLTYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 884
           K+GL+SLTYDSFYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 198 KLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 244


>ref|XP_003539866.1| PREDICTED: uncharacterized protein LOC100499683 [Glycine max]
           gi|255625753|gb|ACU13221.1| unknown [Glycine max]
          Length = 249

 Score =  305 bits (780), Expect = 2e-80
 Identities = 168/226 (74%), Positives = 182/226 (80%), Gaps = 7/226 (3%)
 Frame = +3

Query: 228 ALHRTSP----PQIGA---LPQLFHRTTTPTAPSAGENPSREYMTGLPKVPANKLAGDSN 386
           +L R+ P    PQIGA   LP LFHR T  T P A EN S   + GLPKVPAN L  DSN
Sbjct: 25  SLSRSGPTLDLPQIGAISPLPDLFHRNTA-TMPFAKENASGGNLAGLPKVPANTLGSDSN 83

Query: 387 AINSLGYKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPR 566
           AINS  YKA GLDTNVLAGAR  S V AA+ PM L VN VMARSFER + A TLG+IG +
Sbjct: 84  AINSPRYKASGLDTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHK 143

Query: 567 RFMSDIPSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMK 746
           RFMSDIPSKTSETN SGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VILLFYMIYMK
Sbjct: 144 RFMSDIPSKTSETNLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMK 203

Query: 747 MGLISLTYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 884
           +GL+SLTYDSFYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 204 LGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 249


>ref|XP_003605920.1| Succinate dehydrogenase subunit [Medicago truncatula]
           gi|355506975|gb|AES88117.1| Succinate dehydrogenase
           subunit [Medicago truncatula]
           gi|388502196|gb|AFK39164.1| unknown [Medicago
           truncatula]
          Length = 245

 Score =  296 bits (757), Expect = 1e-77
 Identities = 151/203 (74%), Positives = 171/203 (84%)
 Frame = +3

Query: 276 FHRTTTPTAPSAGENPSREYMTGLPKVPANKLAGDSNAINSLGYKALGLDTNVLAGARYG 455
           FHRTTT T P A +N ++ + +GLP    NKLAG +N  NSL Y+ALGLDTNVLAGARYG
Sbjct: 44  FHRTTT-TLPYADQNSTKGHFSGLPNNLENKLAGHANQFNSLRYQALGLDTNVLAGARYG 102

Query: 456 SSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDIPSKTSETNPSGFRPLSP 635
           + VS  K PMLLG+N +MAR+ ERGVGADTLGL G RRFMSDIPSKTSE   SGFRPLSP
Sbjct: 103 TQVSGTKSPMLLGLNTLMARNIERGVGADTLGLAGHRRFMSDIPSKTSEAKQSGFRPLSP 162

Query: 636 HLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISLTYDSFYQFMFYSSKLNL 815
           HLP+YQPQ+SSTLSI NRIAGA LAAV LLFYMIYMK+GL+ LT+D FYQF+FYSSKL+L
Sbjct: 163 HLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKVGLVGLTFDPFYQFVFYSSKLHL 222

Query: 816 LAVEISALFMSYHLYSAIRHLFV 884
           LA+EISAL MSYHLYSAIRHLF+
Sbjct: 223 LAIEISALAMSYHLYSAIRHLFI 245


>gb|AFK40337.1| unknown [Lotus japonicus]
          Length = 219

 Score =  264 bits (675), Expect = 3e-68
 Identities = 142/220 (64%), Positives = 164/220 (74%)
 Frame = +3

Query: 225 AALHRTSPPQIGALPQLFHRTTTPTAPSAGENPSREYMTGLPKVPANKLAGDSNAINSLG 404
           ++LHRT+PPQIGA           T  + GEN SR  +TGLPK        DSN  +SL 
Sbjct: 22  SSLHRTAPPQIGA-----------TTATGGENTSRGNLTGLPK--------DSNDFSSLR 62

Query: 405 YKALGLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDI 584
           + A GLD  +LAGARYG+   AA  PM +GV   MARSF+RG G + LGL   +RFMSD 
Sbjct: 63  FNAYGLDATLLAGARYGTKACAANGPMQMGV---MARSFQRGAGPEPLGLTSHKRFMSDT 119

Query: 585 PSKTSETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISL 764
            SKT+ET P G RPLSPHLP+YQPQ+SSTLSIFNRIAGA+LAA+I+ FYMIYMKMGLISL
Sbjct: 120 SSKTTETKPYGLRPLSPHLPVYQPQLSSTLSIFNRIAGASLAAIIVAFYMIYMKMGLISL 179

Query: 765 TYDSFYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 884
           TYDSFYQF+FYSSKLNLLA+EISAL  +YHLYSAIRHL V
Sbjct: 180 TYDSFYQFVFYSSKLNLLAIEISALATTYHLYSAIRHLLV 219


>gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glycine max]
          Length = 157

 Score =  250 bits (639), Expect = 5e-64
 Identities = 128/156 (82%), Positives = 141/156 (90%)
 Frame = +3

Query: 417 GLDTNVLAGARYGSSVSAAKVPMLLGVNAVMARSFERGVGADTLGLIGPRRFMSDIPSKT 596
           GL+TNVLAGARY S V AA+  M LGVN VMARSFER + A TLG+IG +RFMSDIPSKT
Sbjct: 2   GLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKT 61

Query: 597 SETNPSGFRPLSPHLPLYQPQVSSTLSIFNRIAGATLAAVILLFYMIYMKMGLISLTYDS 776
           SETNPSGFRPLSPHLPLYQPQ+SSTLSIFNRIAGA LA VIL+FYMIYMK+GL+SLTYDS
Sbjct: 62  SETNPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDS 121

Query: 777 FYQFMFYSSKLNLLAVEISALFMSYHLYSAIRHLFV 884
           FYQF+FYSSKLNLL +EISAL +SYHLYSAIRHLF+
Sbjct: 122 FYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 157


Top