BLASTX nr result

ID: Glycyrrhiza23_contig00001885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001885
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236526.1| uncharacterized protein LOC100305777 [Glycin...   326   6e-87
ref|XP_003601798.1| 60S ribosomal protein L17 [Medicago truncatu...   324   2e-86
ref|XP_003538553.1| PREDICTED: 60S ribosomal protein L17-1-like ...   323   3e-86
ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like ...   322   1e-85
ref|XP_002514927.1| protein with unknown function [Ricinus commu...   322   1e-85

>ref|NP_001236526.1| uncharacterized protein LOC100305777 [Glycine max]
           gi|255626585|gb|ACU13637.1| unknown [Glycine max]
          Length = 181

 Score =  326 bits (835), Expect = 6e-87
 Identities = 167/180 (92%), Positives = 167/180 (92%)
 Frame = -2

Query: 888 KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRR 709
           KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPL KAKRYLEDVLAHKQAIPFRR
Sbjct: 3   KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRR 62

Query: 708 FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 529
           FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ
Sbjct: 63  FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 122

Query: 528 AQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXETQLATSKKKSQALRSGASS 349
           AQKQRRRTYRAHGRINPYMSSPCHIELILS          ETQLATSKKK  ALRSGASS
Sbjct: 123 AQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKKG-ALRSGASS 181


>ref|XP_003601798.1| 60S ribosomal protein L17 [Medicago truncatula]
           gi|355490846|gb|AES72049.1| 60S ribosomal protein L17
           [Medicago truncatula] gi|388511060|gb|AFK43596.1|
           unknown [Medicago truncatula]
           gi|388521145|gb|AFK48634.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  324 bits (830), Expect = 2e-86
 Identities = 163/180 (90%), Positives = 167/180 (92%)
 Frame = -2

Query: 888 KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRR 709
           KYSREPDNPTKS KARGADLRVHFKNTRETAFAIRKLPL KAKRYLEDVLAHKQAIPFRR
Sbjct: 3   KYSREPDNPTKSTKARGADLRVHFKNTRETAFAIRKLPLTKAKRYLEDVLAHKQAIPFRR 62

Query: 708 FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 529
           FC GVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALY+SH+QVNQ
Sbjct: 63  FCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQ 122

Query: 528 AQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXETQLATSKKKSQALRSGASS 349
           AQKQRRRTYRAHGRINPYMSSPCHIELILS          ETQLAT+KKKSQA+RSGASS
Sbjct: 123 AQKQRRRTYRAHGRINPYMSSPCHIELILSEKEETVQKEPETQLATNKKKSQAVRSGASS 182


>ref|XP_003538553.1| PREDICTED: 60S ribosomal protein L17-1-like [Glycine max]
          Length = 181

 Score =  323 bits (829), Expect = 3e-86
 Identities = 165/180 (91%), Positives = 167/180 (92%)
 Frame = -2

Query: 888 KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRR 709
           KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPL KAKRYLEDVLAHKQAIPFRR
Sbjct: 3   KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRR 62

Query: 708 FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 529
           FCGGVGRTAQAK+RHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISH+QVNQ
Sbjct: 63  FCGGVGRTAQAKSRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHVQVNQ 122

Query: 528 AQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXETQLATSKKKSQALRSGASS 349
           AQKQRRRTYRAHGRINPYMSSPCHIELILS          ETQLATSKKK  ALRSGASS
Sbjct: 123 AQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKKG-ALRSGASS 181


>ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like [Cucumis sativus]
           gi|449494927|ref|XP_004159685.1| PREDICTED: 60S
           ribosomal protein L17-2-like [Cucumis sativus]
          Length = 183

 Score =  322 bits (824), Expect = 1e-85
 Identities = 164/181 (90%), Positives = 168/181 (92%), Gaps = 1/181 (0%)
 Frame = -2

Query: 888 KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRR 709
           KYSREPDNPTKSCKARG+DLRVHFKNTRETA A+RKLPLAKAKRYLEDVLAHKQAIPFRR
Sbjct: 3   KYSREPDNPTKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRR 62

Query: 708 FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 529
           FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVD+L +SHIQVNQ
Sbjct: 63  FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQ 122

Query: 528 AQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXETQLATSK-KKSQALRSGAS 352
           AQKQRRRTYRAHGRINPYMSSPCHIELILS          ETQLATSK KKSQALRSGAS
Sbjct: 123 AQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSGAS 182

Query: 351 S 349
           S
Sbjct: 183 S 183


>ref|XP_002514927.1| protein with unknown function [Ricinus communis]
            gi|223545978|gb|EEF47481.1| protein with unknown function
            [Ricinus communis]
          Length = 1086

 Score =  322 bits (824), Expect = 1e-85
 Identities = 163/182 (89%), Positives = 168/182 (92%), Gaps = 2/182 (1%)
 Frame = -2

Query: 888  KYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRR 709
            KYSREP+NPTKSCKARG+DLRVHFKNTRETAFA+RKLPL KAKRYLEDV+AHKQAIPFRR
Sbjct: 905  KYSREPENPTKSCKARGSDLRVHFKNTRETAFALRKLPLTKAKRYLEDVMAHKQAIPFRR 964

Query: 708  FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 529
            FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ
Sbjct: 965  FCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQ 1024

Query: 528  AQKQRRRTYRAHGRINPYMSSPCHIELILSXXXXXXXXXXETQLATSK--KKSQALRSGA 355
            AQKQRRRTYRAHGRINPYMSSPCHIELIL+          ETQLATS   KKSQALRSGA
Sbjct: 1025 AQKQRRRTYRAHGRINPYMSSPCHIELILAEKEEAVRKEPETQLATSNKPKKSQALRSGA 1084

Query: 354  SS 349
            SS
Sbjct: 1085 SS 1086


Top