BLASTX nr result

ID: Glycyrrhiza23_contig00001864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001864
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   219   6e-55
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   207   3e-51
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...   203   5e-50
gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]...   201   2e-49
ref|XP_003631913.1| PREDICTED: photosystem I reaction center sub...   201   3e-49

>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score =  219 bits (559), Expect = 6e-55
 Identities = 114/156 (73%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
 Frame = -3

Query: 675 SELNAKLISVTSPAA--FSGSKLPMIKAQKAIVPEAKESKASEGRRTXXXXXXXXXXXXX 502
           SELNAKLISV S A+   SG KLP+IKAQ+  +PEAKES+AS+GRR              
Sbjct: 18  SELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESRASDGRRNALALLAATLFTTA 77

Query: 501 XXXXXXXXXXAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGC 322
                      GVIEEYLE+SKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGC
Sbjct: 78  VSASNSSANA-GVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGC 136

Query: 321 QDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 214
           QDLAKQKKVPFI+EDLE+ECEGKDKYKCGSNVFWKW
Sbjct: 137 QDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  207 bits (527), Expect = 3e-51
 Identities = 109/159 (68%), Positives = 122/159 (76%), Gaps = 2/159 (1%)
 Frame = -3

Query: 684 TGCSELNAKLISVTSPAA--FSGSKLPMIKAQKAIVPEAKESKASEGRRTXXXXXXXXXX 511
           TG SELNAK++S+ + A+   SG KLP+I+AQ+A   ++KE KASEGRR           
Sbjct: 18  TGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA-DSKEMKASEGRRAALVYLAATLF 76

Query: 510 XXXXXXXXXXXXXAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENF 331
                         GVIE+YLE+SKANKELNDKKRLATSGANFARAYTVQFGTCKFPENF
Sbjct: 77  TSAAAAASANA---GVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENF 133

Query: 330 TGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 214
           TGCQDLAKQKKVPFISEDL +ECEGKDKYKCGSNVFWKW
Sbjct: 134 TGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  203 bits (517), Expect = 5e-50
 Identities = 106/159 (66%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
 Frame = -3

Query: 684 TGCSELNAKLISVTSPAAF--SGSKLPMIKAQKAIVPEAKESKASEGRRTXXXXXXXXXX 511
           TG SELNAK++S+ + A+   SG KLP+I+AQ+    +++E KASEGRR           
Sbjct: 18  TGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTRA-DSREMKASEGRRAAMVYLAATLF 76

Query: 510 XXXXXXXXXXXXXAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENF 331
                         GVIEEYLE+SKANKELNDKKRLATSGANFARA+TVQFGTCKFPENF
Sbjct: 77  TSAAAASSANA---GVIEEYLEKSKANKELNDKKRLATSGANFARAFTVQFGTCKFPENF 133

Query: 330 TGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 214
           TGCQDLAKQKKVPFIS+DL +ECEGKDKYKCGSNVFWKW
Sbjct: 134 TGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 172

 Score =  201 bits (512), Expect = 2e-49
 Identities = 105/159 (66%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
 Frame = -3

Query: 684 TGCSELNAKLISVTSPAAF--SGSKLPMIKAQKAIVPEAKESKASEGRRTXXXXXXXXXX 511
           TG SELNAK++S+ + A+    G KLP+I+AQ+    +++E KASEGRR           
Sbjct: 18  TGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQTRA-DSREMKASEGRRAAMVYLAATLF 76

Query: 510 XXXXXXXXXXXXXAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENF 331
                         GVIEEYLE+SKANKELNDKKRLATSGANFARA+TVQFGTCKFPENF
Sbjct: 77  TSAAAASSANA---GVIEEYLEKSKANKELNDKKRLATSGANFARAFTVQFGTCKFPENF 133

Query: 330 TGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 214
           TGCQDLAKQKKVPFIS+DL +ECEGKDKYKCGSNVFWKW
Sbjct: 134 TGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
           [Vitis vinifera]
          Length = 173

 Score =  201 bits (510), Expect = 3e-49
 Identities = 103/158 (65%), Positives = 119/158 (75%), Gaps = 2/158 (1%)
 Frame = -3

Query: 681 GCSELNAKLISVTSPA--AFSGSKLPMIKAQKAIVPEAKESKASEGRRTXXXXXXXXXXX 508
           G  ELN+KL+S+ S A  A +G KLP I+AQ+A V ++K+  A EGRR            
Sbjct: 19  GAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWGAGEGRRAALVYLAATLFT 78

Query: 507 XXXXXXXXXXXXAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFT 328
                        GVI++YLE+SKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFT
Sbjct: 79  TAAASSSANA---GVIDDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFT 135

Query: 327 GCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 214
           GCQDLAK+KKVPF+SEDLE+ECEG+DKYKCGSNVFWKW
Sbjct: 136 GCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173


Top