BLASTX nr result

ID: Glycyrrhiza23_contig00001858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001858
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Gly...   326   3e-87
ref|XP_003554122.1| PREDICTED: F-box protein At2g32560-like [Gly...   321   1e-85
gb|ABD33039.1| Cyclin-like F-box [Medicago truncatula]                304   1e-80
ref|XP_003624978.1| F-box protein [Medicago truncatula] gi|35549...   304   1e-80
gb|AFK37960.1| unknown [Medicago truncatula]                          302   4e-80

>ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 401

 Score =  326 bits (836), Expect = 3e-87
 Identities = 172/250 (68%), Positives = 190/250 (76%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3   PLSSWENGTTKLVSTEFWGKLLSLLVSRLRTGSTFS----SFLQFSLGMPLRKKSCLVSX 170
           P SS E G  K  S  FWG L S LVSRL+ GST      SF QFSLGM L+K S LVS 
Sbjct: 22  PFSSGERGI-KPGSIGFWGSLSSWLVSRLKKGSTTGTTPFSFFQFSLGMLLKKNS-LVSK 79

Query: 171 XXXXXXXXXXXXFSLLDLPDLPMECILEHLSPAELCNVATVCTSLRDRCMCDYLWERHMK 350
                        SLLDLPDLP+ECILEHLSPAELC VATVCTSLRDRC  D+LW++HM+
Sbjct: 80  VENEEEEGNV---SLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHME 136

Query: 351 RKWGKVIGDAAYKQWKWHVASSRNKEKASNQHNQKRVLANFLHGFLLPF--KSSKSGNGR 524
           RKWGKV GDAAY+QWKWHVAS   ++ +SNQHNQK + A FL G  LPF    +KS  G 
Sbjct: 137 RKWGKVFGDAAYRQWKWHVASKNREKISSNQHNQKGIFA-FLRGGFLPFIWIKAKSEKGT 195

Query: 525 QSRSSLPDDSIASLYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYESRTDTFQAR 704
           +S SSLP+DSIA+LYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCY+SR+DTF AR
Sbjct: 196 ESSSSLPEDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLAR 255

Query: 705 YSPHGRWTTE 734
           YSPHGRWTTE
Sbjct: 256 YSPHGRWTTE 265


>ref|XP_003554122.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score =  321 bits (822), Expect = 1e-85
 Identities = 170/248 (68%), Positives = 189/248 (76%), Gaps = 4/248 (1%)
 Frame = +3

Query: 3   PLSSWENGTTKLVSTEFWGKLLSLLVSRLRTGSTFS--SFLQFSLGMPLRKKSCLVSXXX 176
           P SS E G  KL S  FWG L S LVSRLR GST +  SFLQFSL M L+  S LVS   
Sbjct: 22  PFSSGERGI-KLGSIGFWGSLSSWLVSRLRKGSTSTRFSFLQFSLDMSLKNNS-LVSKGE 79

Query: 177 XXXXXXXXXXFSLLDLPDLPMECILEHLSPAELCNVATVCTSLRDRCMCDYLWERHMKRK 356
                      SLLDLPDLP+ECILEHLSPAELC VATVCTSLRDRC  D+LW++HM+RK
Sbjct: 80  NEEEEVKV---SLLDLPDLPLECILEHLSPAELCRVATVCTSLRDRCRSDHLWKKHMERK 136

Query: 357 WGKVIGDAAYKQWKWHVASSRNKEKASNQHNQKRVLANFLHGFLLP--FKSSKSGNGRQS 530
           WGKV GDA Y+QWKW VAS   ++ +SNQHNQK + A FL+G  LP  +  +KS  G QS
Sbjct: 137 WGKVFGDAVYRQWKWQVASKTREKISSNQHNQKGIFA-FLNGGFLPLLWIKAKSEKGTQS 195

Query: 531 RSSLPDDSIASLYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYESRTDTFQARYS 710
            SSL +DSIA+LYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCY+SR+DTF ARYS
Sbjct: 196 NSSLSEDSIAALYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRSDTFLARYS 255

Query: 711 PHGRWTTE 734
           PHGRWTTE
Sbjct: 256 PHGRWTTE 263


>gb|ABD33039.1| Cyclin-like F-box [Medicago truncatula]
          Length = 394

 Score =  304 bits (779), Expect = 1e-80
 Identities = 165/247 (66%), Positives = 189/247 (76%), Gaps = 3/247 (1%)
 Frame = +3

Query: 3   PLSSWENGTTKLVSTEFWGKLLSLLVSRLRTGSTFS--SFLQFSLGMPLRKKSCLVSXXX 176
           PLSS      KLVS  F GKLLS L SRL+T + F   SF QFSLGM L+ KSCLVS   
Sbjct: 23  PLSS---NVKKLVSNGFCGKLLSFLASRLKTRTIFLPFSFFQFSLGMQLQNKSCLVSKVE 79

Query: 177 XXXXXXXXXXFSLLDLPDLPMECILEHLSPAELCNVATVCTSLRDRCMCDYLWERHMKRK 356
                      SLLDL DLP++CILE LSP+ELCNVA VC SLR++C  DYLWE+HMK K
Sbjct: 80  YREEEEEKA--SLLDLHDLPLDCILEKLSPSELCNVAQVCKSLREKCRSDYLWEKHMKMK 137

Query: 357 WGKVIGDAAYKQWKWHVASSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSR 533
           WGK++GD+AY+QWK +VAS ++ EK SNQH NQK VLA FLH FL PF   KS + +  +
Sbjct: 138 WGKILGDSAYRQWKCYVAS-KSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIK 194

Query: 534 SSLPDDSIASLYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYESRTDTFQARYSP 713
           S  PDDSIA+LYLSLE+GKFWFPAQVYNRENGHAGF+LSCYDA+LCY+SRTDTFQARYSP
Sbjct: 195 SR-PDDSIAALYLSLENGKFWFPAQVYNRENGHAGFLLSCYDAELCYDSRTDTFQARYSP 253

Query: 714 HGRWTTE 734
           HGRWTTE
Sbjct: 254 HGRWTTE 260


>ref|XP_003624978.1| F-box protein [Medicago truncatula] gi|355499993|gb|AES81196.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score =  304 bits (779), Expect = 1e-80
 Identities = 165/247 (66%), Positives = 189/247 (76%), Gaps = 3/247 (1%)
 Frame = +3

Query: 3   PLSSWENGTTKLVSTEFWGKLLSLLVSRLRTGSTFS--SFLQFSLGMPLRKKSCLVSXXX 176
           PLSS      KLVS  F GKLLS L SRL+T + F   SF QFSLGM L+ KSCLVS   
Sbjct: 11  PLSS---NVKKLVSNGFCGKLLSFLASRLKTRTIFLPFSFFQFSLGMQLQNKSCLVSKVE 67

Query: 177 XXXXXXXXXXFSLLDLPDLPMECILEHLSPAELCNVATVCTSLRDRCMCDYLWERHMKRK 356
                      SLLDL DLP++CILE LSP+ELCNVA VC SLR++C  DYLWE+HMK K
Sbjct: 68  YREEEEEKA--SLLDLHDLPLDCILEKLSPSELCNVAQVCKSLREKCRSDYLWEKHMKMK 125

Query: 357 WGKVIGDAAYKQWKWHVASSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSR 533
           WGK++GD+AY+QWK +VAS ++ EK SNQH NQK VLA FLH FL PF   KS + +  +
Sbjct: 126 WGKILGDSAYRQWKCYVAS-KSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIK 182

Query: 534 SSLPDDSIASLYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYESRTDTFQARYSP 713
           S  PDDSIA+LYLSLE+GKFWFPAQVYNRENGHAGF+LSCYDA+LCY+SRTDTFQARYSP
Sbjct: 183 SR-PDDSIAALYLSLENGKFWFPAQVYNRENGHAGFLLSCYDAELCYDSRTDTFQARYSP 241

Query: 714 HGRWTTE 734
           HGRWTTE
Sbjct: 242 HGRWTTE 248


>gb|AFK37960.1| unknown [Medicago truncatula]
          Length = 394

 Score =  302 bits (774), Expect = 4e-80
 Identities = 164/247 (66%), Positives = 188/247 (76%), Gaps = 3/247 (1%)
 Frame = +3

Query: 3   PLSSWENGTTKLVSTEFWGKLLSLLVSRLRTGSTFS--SFLQFSLGMPLRKKSCLVSXXX 176
           PLSS      KLVS  F GKLLS L SRL+T + F   SF  FSLGM L+ KSCLVS   
Sbjct: 23  PLSS---NVKKLVSNGFCGKLLSFLASRLKTRTIFLPFSFFHFSLGMQLQNKSCLVSKVE 79

Query: 177 XXXXXXXXXXFSLLDLPDLPMECILEHLSPAELCNVATVCTSLRDRCMCDYLWERHMKRK 356
                      SLLDL DLP++CILE LSP+ELCNVA VC SLR++C  DYLWE+HMK K
Sbjct: 80  YREEEEEKA--SLLDLHDLPLDCILEKLSPSELCNVAQVCKSLREKCRSDYLWEKHMKMK 137

Query: 357 WGKVIGDAAYKQWKWHVASSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSR 533
           WGK++GD+AY+QWK +VAS ++ EK SNQH NQK VLA FLH FL PF   KS + +  +
Sbjct: 138 WGKILGDSAYRQWKCYVAS-KSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIK 194

Query: 534 SSLPDDSIASLYLSLESGKFWFPAQVYNRENGHAGFMLSCYDAQLCYESRTDTFQARYSP 713
           S  PDDSIA+LYLSLE+GKFWFPAQVYNRENGHAGF+LSCYDA+LCY+SRTDTFQARYSP
Sbjct: 195 SR-PDDSIAALYLSLENGKFWFPAQVYNRENGHAGFLLSCYDAELCYDSRTDTFQARYSP 253

Query: 714 HGRWTTE 734
           HGRWTTE
Sbjct: 254 HGRWTTE 260


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