BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001836
         (1961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607988.1| Pentatricopeptide repeat-containing protein ...   754   0.0  
gb|AFK42502.1| unknown [Medicago truncatula]                          752   0.0  
ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containi...   696   0.0  
ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containi...   694   0.0  
ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   625   e-176

>ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509043|gb|AES90185.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 565

 Score =  754 bits (1946), Expect = 0.0
 Identities = 397/586 (67%), Positives = 430/586 (73%), Gaps = 22/586 (3%)
 Frame = -3

Query: 1905 MATFPLIQRARTTMLSSSS--FKLRTNSISIHANY----LSTSALPNEYGRFPPRQQSPS 1744
            MATFPLI RARTTMLSSSS  F L+  S  IH N+    LSTSA+PNEYGR PP Q    
Sbjct: 1    MATFPLIHRARTTMLSSSSSFFSLKLRSNYIHGNHFCKTLSTSAIPNEYGRLPPHQVQQP 60

Query: 1743 ASDPTXXXXXXXXXXXXXXXXXXXXXNAPGRFPQQGWXXXXXXXXXXXXXXXXXPI---- 1576
             SD                        APGRFPQQ W                       
Sbjct: 61   PSDHNQHFNHHNTQN------------APGRFPQQDWNPQNPNFRPPQPPQNPNYRQQPP 108

Query: 1575 PQNPNFHXXXXXXXXXXXXXXXXXXXXXXXXXXXRTQGLPPP------------PQSGHX 1432
            PQNPNF                                 PP             PQ+G+ 
Sbjct: 109  PQNPNFRPPPPPQNPNFRPPPPPQNPNFRQPIRQNPNFQPPNGPNRGINQNQWNPQNGNL 168

Query: 1431 XXXXXXXXXXXXXXXXNDQASVQEQQQAPPPSIADLTRLCREGKVKEAIELMDKGVKADA 1252
                              Q    ++Q  PPPSI DLTR C+EGKVKEA+ELM+KG+KADA
Sbjct: 169  NQFQNPNNQF--------QTPNVQEQAPPPPSIVDLTRFCQEGKVKEALELMEKGIKADA 220

Query: 1251 HCFDLLIDSCGKSKSLEDAKKVHDYFLQSTCRSDFNLSNKVIEMYGNCKSMTDARRVFDH 1072
            +CF++L D CGKSKS+EDAKKVHDYFLQST RSDF + NKVIEMYGNCKSMTDARRVFDH
Sbjct: 221  NCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDH 280

Query: 1071 MPNRNMDSWHLMLRGYANNTMGDEALQLFEQMNELGLEITSETFLAVLSACASAEAVEDA 892
            MPNRNMDSWH+M+RGYAN+TMGDE LQLFEQMNELGLEITSET LAVLSAC SAEAVEDA
Sbjct: 281  MPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSAEAVEDA 340

Query: 891  YLHFESMKSKYGIEPGVEHYMGLLDVLGQAGYLKEAEEFIEKSLPFELTATVWETLKNYA 712
            Y++ ESMKSKYGIEPGVEHYMGLLDVLGQ+GYLKEAEEFIE+ LPFE T TV+ETLKNYA
Sbjct: 341  YIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQ-LPFEPTVTVFETLKNYA 399

Query: 711  RVHGDIDLEDHAEELMVNLDPSKAVANKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKD 532
            R+HGD+DLEDH EEL+V+LDPSKAVANKIPTPPPKKYTAISMLDG+NRIIEYKNPTLYKD
Sbjct: 400  RIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEYKNPTLYKD 459

Query: 531  DEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLINTPPRTPLRII 352
            DEKL A++ MK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI+TPPRTPLRII
Sbjct: 460  DEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRII 519

Query: 351  KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 214
            KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 520  KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565


>gb|AFK42502.1| unknown [Medicago truncatula]
          Length = 565

 Score =  752 bits (1942), Expect = 0.0
 Identities = 396/586 (67%), Positives = 430/586 (73%), Gaps = 22/586 (3%)
 Frame = -3

Query: 1905 MATFPLIQRARTTMLSSSS--FKLRTNSISIHANY----LSTSALPNEYGRFPPRQQSPS 1744
            MATFPLI RARTTMLSSSS  F L+  S  IH N+    LSTSA+PNEYGR PP +    
Sbjct: 1    MATFPLIHRARTTMLSSSSSFFSLKLRSNYIHGNHFCKTLSTSAIPNEYGRLPPHRVQQP 60

Query: 1743 ASDPTXXXXXXXXXXXXXXXXXXXXXNAPGRFPQQGWXXXXXXXXXXXXXXXXXPI---- 1576
             SD                        APGRFPQQ W                       
Sbjct: 61   PSDHNQHFNHHNTQN------------APGRFPQQDWNPQNPNFRPPQPPQNPNYRQQPP 108

Query: 1575 PQNPNFHXXXXXXXXXXXXXXXXXXXXXXXXXXXRTQGLPPP------------PQSGHX 1432
            PQNPNF                                 PP             PQ+G+ 
Sbjct: 109  PQNPNFRPPPPPQNPNFRPPPPPQNPNFRQPIRQNPNFQPPNGPNRGINQNQWNPQNGNL 168

Query: 1431 XXXXXXXXXXXXXXXXNDQASVQEQQQAPPPSIADLTRLCREGKVKEAIELMDKGVKADA 1252
                              Q    ++Q  PPPSI DLTR C+EGKVKEA+ELM+KG+KADA
Sbjct: 169  NQFQNPNNQF--------QTPNVQEQAPPPPSIVDLTRFCQEGKVKEALELMEKGIKADA 220

Query: 1251 HCFDLLIDSCGKSKSLEDAKKVHDYFLQSTCRSDFNLSNKVIEMYGNCKSMTDARRVFDH 1072
            +CF++L D CGKSKS+EDAKKVHDYFLQST RSDF + NKVIEMYGNCKSMTDARRVFDH
Sbjct: 221  NCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDH 280

Query: 1071 MPNRNMDSWHLMLRGYANNTMGDEALQLFEQMNELGLEITSETFLAVLSACASAEAVEDA 892
            MPNRNMDSWH+M+RGYAN+TMGDE LQLFEQMNELGLEITSET LAVLSAC SAEAVEDA
Sbjct: 281  MPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSAEAVEDA 340

Query: 891  YLHFESMKSKYGIEPGVEHYMGLLDVLGQAGYLKEAEEFIEKSLPFELTATVWETLKNYA 712
            Y++ ESMKSKYGIEPGVEHYMGLLDVLGQ+GYLKEAEEFIE+ LPFE T TV+ETLKNYA
Sbjct: 341  YIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQ-LPFEPTVTVFETLKNYA 399

Query: 711  RVHGDIDLEDHAEELMVNLDPSKAVANKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKD 532
            R+HGD+DLEDH EEL+V+LDPSKAVANKIPTPPPKKYTAISMLDG+NRIIEYKNPTLYKD
Sbjct: 400  RIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISMLDGKNRIIEYKNPTLYKD 459

Query: 531  DEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLINTPPRTPLRII 352
            DEKL A++ MK+AGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI+TPPRTPLRII
Sbjct: 460  DEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRII 519

Query: 351  KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 214
            KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 520  KNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565


>ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Glycine max]
          Length = 591

 Score =  696 bits (1796), Expect = 0.0
 Identities = 346/397 (87%), Positives = 365/397 (91%), Gaps = 8/397 (2%)
 Frame = -3

Query: 1380 DQASVQEQQQ-APPP-------SIADLTRLCREGKVKEAIELMDKGVKADAHCFDLLIDS 1225
            +QAS+Q Q   APPP       SI DLTRLC+EGKVKEAIELMDKGVKADA CFDLL D 
Sbjct: 196  NQASIQAQTHPAPPPPPHPLPPSITDLTRLCKEGKVKEAIELMDKGVKADAGCFDLLFDL 255

Query: 1224 CGKSKSLEDAKKVHDYFLQSTCRSDFNLSNKVIEMYGNCKSMTDARRVFDHMPNRNMDSW 1045
            CG+SKSLEDAKK HD+FLQST RSD  L+NKVIEMYGNCKSMTDARRVFDHMPNR+M SW
Sbjct: 256  CGQSKSLEDAKKAHDHFLQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMGSW 315

Query: 1044 HLMLRGYANNTMGDEALQLFEQMNELGLEITSETFLAVLSACASAEAVEDAYLHFESMKS 865
            HLMLRGYA NT GD+ALQLFEQMNELGLEITSET LAVLSACASAE VEDA+LHFESMKS
Sbjct: 316  HLMLRGYAYNTNGDDALQLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKS 375

Query: 864  KYGIEPGVEHYMGLLDVLGQAGYLKEAEEFIEKSLPFELTATVWETLKNYARVHGDIDLE 685
            KYGIEPGVEHYMGLLDVLGQ+ YLKEAEEFI++ LPFE T  VWE LK+YARVHGD+DLE
Sbjct: 376  KYGIEPGVEHYMGLLDVLGQSAYLKEAEEFIDQ-LPFEPTVAVWEKLKHYARVHGDVDLE 434

Query: 684  DHAEELMVNLDPSKAVANKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKDDEKLKALSG 505
            D+ EEL+V+LDPSKAVANKIPTPPPKKYTAI+MLDGRNRIIEYKNPTLYKDDEKLKALSG
Sbjct: 435  DYTEELIVSLDPSKAVANKIPTPPPKKYTAINMLDGRNRIIEYKNPTLYKDDEKLKALSG 494

Query: 504  MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLINTPPRTPLRIIKNLRVCGDC 325
            MKE GYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI+TPPRTPLRIIKNLRVCGDC
Sbjct: 495  MKETGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDC 554

Query: 324  HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 214
            HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 555  HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 591



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 8/67 (11%)
 Frame = -3

Query: 1905 MATFPLIQRARTTMLSSSSFKLRTNSI-------SIHANYLSTSALPNEYGRFPPRQ-QS 1750
            MATF  IQRARTTML SSSFKLRT+ +       ++  N LSTSALP+EY RFP +Q Q 
Sbjct: 1    MATFTSIQRARTTML-SSSFKLRTHLLHGNHFTQTLTTNSLSTSALPHEYQRFPSQQNQH 59

Query: 1749 PSASDPT 1729
               SDP+
Sbjct: 60   QPPSDPS 66


>ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Glycine max]
          Length = 588

 Score =  694 bits (1790), Expect = 0.0
 Identities = 346/393 (88%), Positives = 362/393 (92%), Gaps = 4/393 (1%)
 Frame = -3

Query: 1380 DQASVQEQQQ-APPP---SIADLTRLCREGKVKEAIELMDKGVKADAHCFDLLIDSCGKS 1213
            +Q SVQ Q   APPP   SI DLTRLCREGKVKEAIELMDKGVKADA CF LL DSCG+S
Sbjct: 197  NQTSVQSQASPAPPPQPPSITDLTRLCREGKVKEAIELMDKGVKADAGCFALLFDSCGQS 256

Query: 1212 KSLEDAKKVHDYFLQSTCRSDFNLSNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHLML 1033
            KSLEDAKK HD+FLQST RSD  L+NKVIEMYGNCKSMTDARRVFDHMPNR+MDSWHLM+
Sbjct: 257  KSLEDAKKAHDHFLQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMDSWHLMM 316

Query: 1032 RGYANNTMGDEALQLFEQMNELGLEITSETFLAVLSACASAEAVEDAYLHFESMKSKYGI 853
            RGYANNT GDEALQLFEQMNELGLEITSET LAVLSACASAE VEDA+LHFESMKSKYGI
Sbjct: 317  RGYANNTNGDEALQLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYGI 376

Query: 852  EPGVEHYMGLLDVLGQAGYLKEAEEFIEKSLPFELTATVWETLKNYARVHGDIDLEDHAE 673
            EP V HYMGLLDVLGQ+ YLKEAEEFI++ LPFE T  VWE LK+YAR HGD DLED+ E
Sbjct: 377  EPVVGHYMGLLDVLGQSAYLKEAEEFIDQ-LPFEPTVAVWEKLKHYARAHGDFDLEDYTE 435

Query: 672  ELMVNLDPSKAVANKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKDDEKLKALSGMKEA 493
            EL+V+LDPSKAVANKIP PPPKKYTAI+MLDGRNRIIEYKNPTLYKDDEKLKALSGMKEA
Sbjct: 436  ELIVSLDPSKAVANKIPMPPPKKYTAINMLDGRNRIIEYKNPTLYKDDEKLKALSGMKEA 495

Query: 492  GYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLINTPPRTPLRIIKNLRVCGDCHNAI 313
            GYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI+TPPRTPLRIIKNLRVCGDCHNAI
Sbjct: 496  GYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAI 555

Query: 312  KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 214
            KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 556  KIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 8/67 (11%)
 Frame = -3

Query: 1905 MATFPLIQRARTTMLSSSSFKLRTNSI-------SIHANYLSTSALPNEYGRFPPRQ-QS 1750
            MATF  IQRARTTML SSSFKLRT+ I       ++    L+TSALP+EY RFP +Q Q 
Sbjct: 1    MATFTSIQRARTTML-SSSFKLRTHLIYGNHFTQTLTTKSLTTSALPHEYQRFPSQQNQH 59

Query: 1749 PSASDPT 1729
               SDPT
Sbjct: 60   QPPSDPT 66


>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
            [Vitis vinifera]
          Length = 593

 Score =  625 bits (1612), Expect = e-176
 Identities = 299/390 (76%), Positives = 345/390 (88%), Gaps = 1/390 (0%)
 Frame = -3

Query: 1380 DQASVQEQQQA-PPPSIADLTRLCREGKVKEAIELMDKGVKADAHCFDLLIDSCGKSKSL 1204
            +QA + E Q +  PPS+ADL  LC+EGKVKEA+ELM+KGV+ADA CF  L +SCG  K L
Sbjct: 205  NQAQIVENQVSHAPPSVADLMNLCQEGKVKEAVELMEKGVRADAQCFYALFNSCGSPKLL 264

Query: 1203 EDAKKVHDYFLQSTCRSDFNLSNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHLMLRGY 1024
            E+AKKVHD+FLQST RSD  L+NKV+EMYGNC SMTDARRVFDHM NR+MDSWHLM+ GY
Sbjct: 265  EEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMDSWHLMINGY 324

Query: 1023 ANNTMGDEALQLFEQMNELGLEITSETFLAVLSACASAEAVEDAYLHFESMKSKYGIEPG 844
            ANN MGD+ LQL+EQM +LGLE   +TFLAVLS CASAEAVE+ ++HFESMK++YGI P 
Sbjct: 325  ANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPT 384

Query: 843  VEHYMGLLDVLGQAGYLKEAEEFIEKSLPFELTATVWETLKNYARVHGDIDLEDHAEELM 664
             EHY+G++DVLG++G++ EA+EFIE+ +P E +A VWE L NYA++HGDIDLEDHAEELM
Sbjct: 385  FEHYVGIIDVLGKSGHVIEAKEFIEQ-MPVEPSAVVWEALMNYAKIHGDIDLEDHAEELM 443

Query: 663  VNLDPSKAVANKIPTPPPKKYTAISMLDGRNRIIEYKNPTLYKDDEKLKALSGMKEAGYV 484
            V LDP KAVANK PTPPPKK TAI+MLDG+NR+ E++NPTLYKDDEKLK+L+GMKEAGYV
Sbjct: 444  VALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYV 503

Query: 483  PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLINTPPRTPLRIIKNLRVCGDCHNAIKIM 304
            PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI+TP RTPLRIIKNLRVCGDCHNAIKIM
Sbjct: 504  PDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIM 563

Query: 303  SRIVGRELIVRDNKRFHHFKDGKCSCGDYW 214
            S+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 564  SKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593