BLASTX nr result

ID: Glycyrrhiza23_contig00001824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001824
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago ...   156   2e-36
ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleo...   156   2e-36
ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleo...   155   5e-36
gb|ADB02890.1| putative small nuclear ribonucleoprotein polypept...   153   2e-35
ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleo...   152   4e-35

>ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
           gi|87240819|gb|ABD32677.1| Like-Sm
           ribonucleoprotein-related, core [Medicago truncatula]
           gi|355500861|gb|AES82064.1| hypothetical protein
           MTR_7g104930 [Medicago truncatula]
          Length = 80

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +1

Query: 52  MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 231
           MSRSGQPPDLKKYMDK+LQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 232 VIRGNSVVTVEALEPVNRS 288
           VIRGNSVVTVEALEPVNRS
Sbjct: 61  VIRGNSVVTVEALEPVNRS 79


>ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
           gi|356572580|ref|XP_003554446.1| PREDICTED: probable
           small nuclear ribonucleoprotein G-like [Glycine max]
           gi|255625815|gb|ACU13252.1| unknown [Glycine max]
          Length = 79

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/79 (97%), Positives = 79/79 (100%)
 Frame = +1

Query: 52  MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 231
           MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 232 VIRGNSVVTVEALEPVNRS 288
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRT 79


>ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
           gi|255630063|gb|ACU15385.1| unknown [Glycine max]
          Length = 79

 Score =  155 bits (391), Expect = 5e-36
 Identities = 77/79 (97%), Positives = 78/79 (98%)
 Frame = +1

Query: 52  MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 231
           MSRSGQPPDLKKYMDKKLQIKLN NRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 232 VIRGNSVVTVEALEPVNRS 288
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRA 79


>gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
           [Jatropha curcas]
          Length = 80

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/79 (94%), Positives = 79/79 (100%)
 Frame = +1

Query: 52  MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 231
           MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLVVDNTVEVNG+EKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKNDIGMV 60

Query: 232 VIRGNSVVTVEALEPVNRS 288
           VIRGNSVVTVEALEPVN++
Sbjct: 61  VIRGNSVVTVEALEPVNKT 79


>ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus] gi|449482341|ref|XP_004156252.1| PREDICTED:
           probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus]
          Length = 80

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/78 (94%), Positives = 77/78 (98%)
 Frame = +1

Query: 52  MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 231
           MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLVVDNTVEVNGNEK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 232 VIRGNSVVTVEALEPVNR 285
           VIRGNSVVTVEALEPVNR
Sbjct: 61  VIRGNSVVTVEALEPVNR 78


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