BLASTX nr result

ID: Glycyrrhiza23_contig00001712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001712
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   653   0.0  
gb|ACU17996.1| unknown [Glycine max]                                  651   0.0  
ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   646   0.0  
ref|XP_003518912.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   634   e-179
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   629   e-178

>ref|XP_003521251.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score =  653 bits (1685), Expect = 0.0
 Identities = 313/345 (90%), Positives = 327/345 (94%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1419 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSHSWKAAIRSRELFKARQEVGSSEELLCV 1240
            MSGLIE LPDAVAIRCLARVPFY HP LELVS SW+AAIRS ELFKARQEVGS+E+LLCV
Sbjct: 1    MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60

Query: 1239 CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 1060
            CAFDPENLWQLYDP+RDLWITLPVLPSKIRHLS+FGAVSTAGKLFVIGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 1059 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEM 880
            QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRK+ISQAEM
Sbjct: 121  QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEM 180

Query: 879  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVFDNDGPGWIVEECAWLQ 700
            YDP+KDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKD+STVQV DN GPGW VEEC WLQ
Sbjct: 181  YDPDKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDLSTVQVLDNAGPGWTVEECVWLQ 240

Query: 699  GPMAVVQDTLYVMSHGLIIKQDG--RKVVGSASEFRRRIGFAMIGLGDELYMIGGFIGPD 526
            G MAVV D LYVMSHGLI KQD   RKVVGSASEFR+RIGFAM GLGD+LY+IGGFIGPD
Sbjct: 241  GQMAVVGDALYVMSHGLIFKQDKEVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPD 300

Query: 525  RWNWDIKPLSDVDVLTLGSDRPTWRQAAPMTQCHGTILGCTLLRI 391
            RWNWDIKPLS+VDVLTLGS+RPTWRQAAPMT+CHG ILGCTLLRI
Sbjct: 301  RWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGPILGCTLLRI 345


>gb|ACU17996.1| unknown [Glycine max]
          Length = 345

 Score =  651 bits (1679), Expect = 0.0
 Identities = 312/345 (90%), Positives = 327/345 (94%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1419 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSHSWKAAIRSRELFKARQEVGSSEELLCV 1240
            MSGLIE LPDAVAIRCLARVPFY HP LELVS SW+AAIRS ELFKARQEVGS+E+LLCV
Sbjct: 1    MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60

Query: 1239 CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 1060
            CAFDPENLWQLYDP+RDLWITLPVLPSKIRHLS+FGAVSTAGKLFVIGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 1059 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEM 880
            QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRK+ISQAEM
Sbjct: 121  QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEM 180

Query: 879  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVFDNDGPGWIVEECAWLQ 700
            YDP+KDVWIPMPDLHRTHNSACSGVVIGGKV+VLHKD+STVQV DN GPGW VEEC WLQ
Sbjct: 181  YDPDKDVWIPMPDLHRTHNSACSGVVIGGKVYVLHKDLSTVQVLDNAGPGWTVEECVWLQ 240

Query: 699  GPMAVVQDTLYVMSHGLIIKQD--GRKVVGSASEFRRRIGFAMIGLGDELYMIGGFIGPD 526
            G MAVV D LYVMSHGLI KQD   RKVVGSASEFR+RIGFAM GLGD+LY+IGGFIGPD
Sbjct: 241  GQMAVVGDALYVMSHGLIFKQDKEERKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPD 300

Query: 525  RWNWDIKPLSDVDVLTLGSDRPTWRQAAPMTQCHGTILGCTLLRI 391
            RWNWDIKPLS+VDVLTLGS+RPTWRQAAPMT+CHG ILGCTLLRI
Sbjct: 301  RWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGPILGCTLLRI 345


>ref|XP_003554261.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 345

 Score =  646 bits (1666), Expect = 0.0
 Identities = 309/345 (89%), Positives = 326/345 (94%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1419 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSHSWKAAIRSRELFKARQEVGSSEELLCV 1240
            MSGLIEGLPDAVAIRCLARVPFYLHP LELVS SW+AAI S ELFKARQEVGS+E+LLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAICSPELFKARQEVGSTEDLLCV 60

Query: 1239 CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 1060
            CAFDPENLWQLYDP++DLWITLPVLPSKIRHLS+FGAVSTAGKLFVIGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPMQDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 1059 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEM 880
            QDGCFATDEVWSYDPV R+WA RASMLVPRSMFACCVLNGKIVVAGGFTSCRK+ISQ+EM
Sbjct: 121  QDGCFATDEVWSYDPVAREWASRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQSEM 180

Query: 879  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVFDNDGPGWIVEECAWLQ 700
            YDP+KD+WIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQV DN GPGW VEEC WLQ
Sbjct: 181  YDPDKDIWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWTVEECVWLQ 240

Query: 699  GPMAVVQDTLYVMSHGLIIKQDG--RKVVGSASEFRRRIGFAMIGLGDELYMIGGFIGPD 526
            G MAVV D LYVMSHGLI KQD   RKVVGSASEFR+RIGFAM GLGD+LY+IGGFIGPD
Sbjct: 241  GQMAVVGDALYVMSHGLIFKQDKEVRKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPD 300

Query: 525  RWNWDIKPLSDVDVLTLGSDRPTWRQAAPMTQCHGTILGCTLLRI 391
            RWNWDIKPLS+VDVLTLGS+RPTWRQAA MT+CHGTILGCTLLRI
Sbjct: 301  RWNWDIKPLSEVDVLTLGSERPTWRQAARMTRCHGTILGCTLLRI 345


>ref|XP_003518912.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Glycine max]
          Length = 344

 Score =  634 bits (1636), Expect = e-179
 Identities = 306/345 (88%), Positives = 324/345 (93%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1419 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSHSWKAAIRSRELFKARQEVGSSEELLCV 1240
            MSGLIEGLPDAVAIRCLA VPFYLHPKLELVS +W+A +R  ELFKARQE+GSSE+LLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 1239 CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 1060
            CAF+PENLWQLYDPLRDLWITLPVLPS+IRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 1059 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEM 880
            QDGCFAT+EVWSYDPVVRQW+PRA+MLVPRSMFACCV+NGKIVVAGGFTSCRK+ISQAEM
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEM 180

Query: 879  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVFDNDGPGWIVEECAWLQ 700
            YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQV DN G  W VEE  WL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGQ-WTVEEYGWLH 239

Query: 699  GPMAVVQDTLYVMSHGLIIKQDG--RKVVGSASEFRRRIGFAMIGLGDELYMIGGFIGPD 526
            G MAV++D LYV+S+GLIIKQD   RKVVGSASEFRRRIGFAMIGLGDELY+IGG IGPD
Sbjct: 240  GQMAVIRDALYVISYGLIIKQDKKMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIGPD 299

Query: 525  RWNWDIKPLSDVDVLTLGSDRPTWRQAAPMTQCHGTILGCTLLRI 391
            RWNWDIKPLSDVDVLTL SDRPTWRQAAPMT+C GTILGCTLLRI
Sbjct: 300  RWNWDIKPLSDVDVLTLASDRPTWRQAAPMTRCGGTILGCTLLRI 344


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Glycine
            max] gi|356536141|ref|XP_003536598.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Glycine
            max] gi|356536143|ref|XP_003536599.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Glycine
            max]
          Length = 344

 Score =  629 bits (1622), Expect = e-178
 Identities = 303/345 (87%), Positives = 322/345 (93%), Gaps = 2/345 (0%)
 Frame = -3

Query: 1419 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSHSWKAAIRSRELFKARQEVGSSEELLCV 1240
            MSGLIEGLPDAVAIRCLA VPFYLHPKLELVS +W+A +R  ELFKARQE+GSSE+LLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 1239 CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 1060
            CAF+PENLWQLYDP RDLWITLPVLPS+IRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 1059 QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEM 880
            QDGCFAT+EVWSYDPVVRQW+PRA+MLVPRSMFACCV+NGKIVVAGGFTSCRK+ISQAE+
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEI 180

Query: 879  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVFDNDGPGWIVEECAWLQ 700
            YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQV DN G  W VEE  WL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGQ-WTVEEYGWLH 239

Query: 699  GPMAVVQDTLYVMSHGLIIKQDG--RKVVGSASEFRRRIGFAMIGLGDELYMIGGFIGPD 526
            G MAV++D LYV+SHGLIIKQD   RKVVGSASEFRRRIGFAMIGLGDELY+IGG IGPD
Sbjct: 240  GQMAVIRDALYVISHGLIIKQDKKMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIGPD 299

Query: 525  RWNWDIKPLSDVDVLTLGSDRPTWRQAAPMTQCHGTILGCTLLRI 391
            RWNWDIKPLSDVDVLTL S+RPTWRQAAPMT+C GTILGCT LRI
Sbjct: 300  RWNWDIKPLSDVDVLTLASERPTWRQAAPMTRCGGTILGCTQLRI 344


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