BLASTX nr result

ID: Glycyrrhiza23_contig00001685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001685
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597343.1| Histone H2A [Medicago truncatula] gi|1089360...   169   6e-40
ref|XP_003629797.1| Histone H2A [Medicago truncatula] gi|3555238...   168   1e-39
ref|XP_002533104.1| histone h2a, putative [Ricinus communis] gi|...   168   2e-39
ref|XP_002533102.1| histone h2a, putative [Ricinus communis] gi|...   168   2e-39
ref|XP_003607007.1| Histone H2A [Medicago truncatula] gi|1089360...   167   2e-39

>ref|XP_003597343.1| Histone H2A [Medicago truncatula]
           gi|108936002|sp|Q2HU65.1|H2A2_MEDTR RecName:
           Full=Probable histone H2A.2 gi|87240422|gb|ABD32280.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355486391|gb|AES67594.1| Histone H2A [Medicago
           truncatula] gi|388520599|gb|AFK48361.1| unknown
           [Medicago truncatula] gi|388520959|gb|AFK48541.1|
           unknown [Medicago truncatula]
          Length = 153

 Score =  169 bits (429), Expect = 6e-40
 Identities = 92/131 (70%), Positives = 95/131 (72%)
 Frame = -1

Query: 782 MDASXXXXXXXXXXXXXXXXXKAVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGAGAPXXX 603
           MDAS                 K+VTRS+RAGLQFPVGRIGRYLKKGRYAQRVG GAP   
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 602 XXXXXXXXXXXXXXAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 423
                         AGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 422 NPVLLPKKADR 390
           NPVLLPKK +R
Sbjct: 121 NPVLLPKKTER 131


>ref|XP_003629797.1| Histone H2A [Medicago truncatula] gi|355523819|gb|AET04273.1|
           Histone H2A [Medicago truncatula]
           gi|388503482|gb|AFK39807.1| unknown [Medicago
           truncatula]
          Length = 150

 Score =  168 bits (426), Expect = 1e-39
 Identities = 86/109 (78%), Positives = 91/109 (83%)
 Frame = -1

Query: 716 AVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDN 537
           +VTRS+RAGLQFPVGRIGRYLKKGRYAQRVG GAP                 AGNAARDN
Sbjct: 24  SVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 83

Query: 536 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKADR 390
           KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK+++
Sbjct: 84  KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEK 132


>ref|XP_002533104.1| histone h2a, putative [Ricinus communis]
           gi|223527095|gb|EEF29276.1| histone h2a, putative
           [Ricinus communis]
          Length = 150

 Score =  168 bits (425), Expect = 2e-39
 Identities = 87/108 (80%), Positives = 89/108 (82%)
 Frame = -1

Query: 713 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNK 534
           VTRSVRAGLQFPVGRIGRYLKKGRYAQRVG GAP                 AGNAARDNK
Sbjct: 24  VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNK 83

Query: 533 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKADR 390
           KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK ++
Sbjct: 84  KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEK 131


>ref|XP_002533102.1| histone h2a, putative [Ricinus communis]
           gi|223527093|gb|EEF29274.1| histone h2a, putative
           [Ricinus communis]
          Length = 150

 Score =  168 bits (425), Expect = 2e-39
 Identities = 87/108 (80%), Positives = 89/108 (82%)
 Frame = -1

Query: 713 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNK 534
           VTRSVRAGLQFPVGRIGRYLKKGRYAQRVG GAP                 AGNAARDNK
Sbjct: 24  VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNK 83

Query: 533 KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKADR 390
           KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK ++
Sbjct: 84  KNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEK 131


>ref|XP_003607007.1| Histone H2A [Medicago truncatula]
           gi|108936003|sp|Q1S053.1|H2A3_MEDTR RecName:
           Full=Probable histone H2A.3 gi|355508062|gb|AES89204.1|
           Histone H2A [Medicago truncatula]
          Length = 152

 Score =  167 bits (424), Expect = 2e-39
 Identities = 85/109 (77%), Positives = 90/109 (82%)
 Frame = -1

Query: 716 AVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGAGAPXXXXXXXXXXXXXXXXXAGNAARDN 537
           +VTRS+RAGLQFPVGRIGRYLKKGRYAQRVG GAP                 AGNAARDN
Sbjct: 24  SVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 83

Query: 536 KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKADR 390
           KKNRIIPRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPKK +R
Sbjct: 84  KKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTER 132


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