BLASTX nr result

ID: Glycyrrhiza23_contig00001669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001669
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553190.1| PREDICTED: 26S protease regulatory subunit 6...   275   4e-72
ref|XP_003538340.1| PREDICTED: 26S protease regulatory subunit 6...   274   9e-72
ref|XP_004154554.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease...   261   8e-68
ref|XP_004139931.1| PREDICTED: 26S protease regulatory subunit 6...   261   8e-68
ref|XP_002523664.1| 26S protease regulatory subunit 6b, putative...   256   2e-66

>ref|XP_003553190.1| PREDICTED: 26S protease regulatory subunit 6B homolog [Glycine max]
          Length = 422

 Score =  275 bits (704), Expect = 4e-72
 Identities = 149/169 (88%), Positives = 151/169 (89%), Gaps = 4/169 (2%)
 Frame = +3

Query: 153 MGSSAMVLDXXXXXXXXXXXXXTKSDYL---YGGDA-GTDEDDLYSRLKSLQRQLEFIDI 320
           MGSSAMVLD             TKSDYL   +GGDA  +DEDDLYSRLKSLQRQLEFIDI
Sbjct: 1   MGSSAMVLDPKPSSEPPPFLPSTKSDYLQGSFGGDATASDEDDLYSRLKSLQRQLEFIDI 60

Query: 321 QEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRIL 500
           QEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRIL
Sbjct: 61  QEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRIL 120

Query: 501 STINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 647
           STINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN
Sbjct: 121 STINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 169


>ref|XP_003538340.1| PREDICTED: 26S protease regulatory subunit 6B homolog [Glycine max]
          Length = 423

 Score =  274 bits (701), Expect = 9e-72
 Identities = 147/170 (86%), Positives = 150/170 (88%), Gaps = 5/170 (2%)
 Frame = +3

Query: 153 MGSSAMVLDXXXXXXXXXXXXXTKSDYLYGGDAGTD-----EDDLYSRLKSLQRQLEFID 317
           MGSSAMVLD             TKSDYL GG +G+D     EDDLYSRLK+LQRQLEFID
Sbjct: 1   MGSSAMVLDPKPSSEPPPFLASTKSDYLQGGFSGSDATASDEDDLYSRLKTLQRQLEFID 60

Query: 318 IQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRI 497
           IQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRI
Sbjct: 61  IQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRI 120

Query: 498 LSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 647
           LSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN
Sbjct: 121 LSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 170


>ref|XP_004154554.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit 6B
           homolog [Cucumis sativus]
          Length = 418

 Score =  261 bits (667), Expect = 8e-68
 Identities = 139/165 (84%), Positives = 143/165 (86%)
 Frame = +3

Query: 153 MGSSAMVLDXXXXXXXXXXXXXTKSDYLYGGDAGTDEDDLYSRLKSLQRQLEFIDIQEEY 332
           M +SAMVLD              +SD     +  +DEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASLPPMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 333 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 512
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 513 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 647
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 165


>ref|XP_004139931.1| PREDICTED: 26S protease regulatory subunit 6B homolog [Cucumis
           sativus]
          Length = 418

 Score =  261 bits (667), Expect = 8e-68
 Identities = 139/165 (84%), Positives = 143/165 (86%)
 Frame = +3

Query: 153 MGSSAMVLDXXXXXXXXXXXXXTKSDYLYGGDAGTDEDDLYSRLKSLQRQLEFIDIQEEY 332
           M +SAMVLD              +SD     +  +DEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASLPPMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 333 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 512
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 513 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 647
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 165


>ref|XP_002523664.1| 26S protease regulatory subunit 6b, putative [Ricinus communis]
           gi|223537064|gb|EEF38699.1| 26S protease regulatory
           subunit 6b, putative [Ricinus communis]
          Length = 415

 Score =  256 bits (655), Expect = 2e-66
 Identities = 139/165 (84%), Positives = 141/165 (85%)
 Frame = +3

Query: 153 MGSSAMVLDXXXXXXXXXXXXXTKSDYLYGGDAGTDEDDLYSRLKSLQRQLEFIDIQEEY 332
           M SSAMVLD              +S   +      DEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MASSAMVLDPKPVSSPSRSDLQQQS---FSDLTNADEDDLYSRLKSLQRQLEFIDIQEEY 57

Query: 333 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 512
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 58  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 117

Query: 513 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 647
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN
Sbjct: 118 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYN 162


Top