BLASTX nr result

ID: Glycyrrhiza23_contig00001659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001659
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
gb|AFK45847.1| unknown [Medicago truncatula]                          166   1e-39
ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like ...   166   1e-39
ref|XP_003612594.1| 60S ribosomal protein L13 [Medicago truncatu...   166   1e-39

>ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|222867470|gb|EEF04601.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/87 (95%), Positives = 85/87 (97%)
 Frame = -3

Query: 262 RPTAGPLRPIVHGQTLKYNMKVRAGKGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 83
           RPTAGPLRPIVHGQTLKYNMKVRAG+GFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE
Sbjct: 48  RPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 107

Query: 82  GLQANVQRLKTYKAKLVVFPRRARKVK 2
           GLQAN+QRLKTYKAKLVVFPR ARK K
Sbjct: 108 GLQANIQRLKTYKAKLVVFPRHARKFK 134


>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  167 bits (423), Expect = 8e-40
 Identities = 83/87 (95%), Positives = 85/87 (97%)
 Frame = -3

Query: 262 RPTAGPLRPIVHGQTLKYNMKVRAGKGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 83
           RPTAGPLRPIVHGQTLKYNMKVRAG+GFSLEELKAAGIPKKLAPTIGIAVDHRR+N SLE
Sbjct: 48  RPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLE 107

Query: 82  GLQANVQRLKTYKAKLVVFPRRARKVK 2
           GLQANVQRLKTYKAKLVVFPRRARK K
Sbjct: 108 GLQANVQRLKTYKAKLVVFPRRARKFK 134


>gb|AFK45847.1| unknown [Medicago truncatula]
          Length = 207

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/87 (94%), Positives = 85/87 (97%)
 Frame = -3

Query: 262 RPTAGPLRPIVHGQTLKYNMKVRAGKGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 83
           RPTAGPLRPIVHGQT KYNMK+RAGKGFSLEELKAAGIPKKLAPTIGI++DHRRKN SLE
Sbjct: 48  RPTAGPLRPIVHGQTQKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISIDHRRKNRSLE 107

Query: 82  GLQANVQRLKTYKAKLVVFPRRARKVK 2
           GLQANVQRLKTYKAKLVVFPRRARKVK
Sbjct: 108 GLQANVQRLKTYKAKLVVFPRRARKVK 134


>ref|XP_003522855.1| PREDICTED: 60S ribosomal protein L13-2-like [Glycine max]
          Length = 207

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/87 (95%), Positives = 85/87 (97%)
 Frame = -3

Query: 262 RPTAGPLRPIVHGQTLKYNMKVRAGKGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 83
           RPTAGPLRPIVHGQTLKYNMKVRAG+GFSLEELKAAGIPKKLAPTIGIAVDHRRKN SLE
Sbjct: 48  RPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLE 107

Query: 82  GLQANVQRLKTYKAKLVVFPRRARKVK 2
            LQANVQRLKTYKAKLVVFPRRA+KVK
Sbjct: 108 SLQANVQRLKTYKAKLVVFPRRAQKVK 134


>ref|XP_003612594.1| 60S ribosomal protein L13 [Medicago truncatula]
           gi|355513929|gb|AES95552.1| 60S ribosomal protein L13
           [Medicago truncatula]
          Length = 240

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/87 (94%), Positives = 85/87 (97%)
 Frame = -3

Query: 262 RPTAGPLRPIVHGQTLKYNMKVRAGKGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLE 83
           RPTAGPLRPIVHGQT KYNMK+RAGKGFSLEELKAAGIPKKLAPTIGI++DHRRKN SLE
Sbjct: 81  RPTAGPLRPIVHGQTQKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISIDHRRKNRSLE 140

Query: 82  GLQANVQRLKTYKAKLVVFPRRARKVK 2
           GLQANVQRLKTYKAKLVVFPRRARKVK
Sbjct: 141 GLQANVQRLKTYKAKLVVFPRRARKVK 167


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