BLASTX nr result

ID: Glycyrrhiza23_contig00001636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001636
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai...   283   3e-74
gb|AFK34410.1| unknown [Lotus japonicus]                              283   4e-74
gb|AFK37376.1| unknown [Lotus japonicus]                              281   1e-73
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin...   281   2e-73
ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase...   269   7e-70

>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355511150|gb|AES92292.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
           gi|388491552|gb|AFK33842.1| unknown [Medicago
           truncatula]
          Length = 173

 Score =  283 bits (725), Expect = 3e-74
 Identities = 132/154 (85%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -2

Query: 649 LKSNSSNLCLS-TGSIEWKRKTVTNGSKTHCMKTWNPINNRKFETLSYLPPLSDDSIAKE 473
           LKSNSS+L  S T SIEWK+KTV+NGSK HCMKTWNPINN+KFETLSYLPPLSDDSIAKE
Sbjct: 18  LKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKFETLSYLPPLSDDSIAKE 77

Query: 472 IDYMLKKGWTPCLEFDELGYIHRENSQMPGYYDGRYWTLWKLPMFGCTDSSQVLNEIHEC 293
           IDYMLKK WTPCLEFDE G IHR NSQMPGYYDGRYWTLWKLPMFGC DSSQVLNEI+EC
Sbjct: 78  IDYMLKKRWTPCLEFDEFGCIHRANSQMPGYYDGRYWTLWKLPMFGCNDSSQVLNEINEC 137

Query: 292 KRTYPNAYIRCIAFDNKRHMQSMAFVIQKPAAST 191
           K+TYPNAYIRC+AFDNKRHMQ+MAFVI KP  +T
Sbjct: 138 KKTYPNAYIRCLAFDNKRHMQAMAFVIHKPTTTT 171


>gb|AFK34410.1| unknown [Lotus japonicus]
          Length = 173

 Score =  283 bits (724), Expect = 4e-74
 Identities = 130/153 (84%), Positives = 139/153 (90%)
 Frame = -2

Query: 649 LKSNSSNLCLSTGSIEWKRKTVTNGSKTHCMKTWNPINNRKFETLSYLPPLSDDSIAKEI 470
           LKSNSSNL   TG  EW+ KT +NGSKT CMKTWNPINNRKFETLSYLPPL+D+SIAKE+
Sbjct: 18  LKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFETLSYLPPLTDESIAKEV 77

Query: 469 DYMLKKGWTPCLEFDELGYIHRENSQMPGYYDGRYWTLWKLPMFGCTDSSQVLNEIHECK 290
           DYMLKKGW PCLEFDELG+I RENS+MPGYYDGRYWTLWKLPMFGC DSSQVLNEI ECK
Sbjct: 78  DYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPMFGCNDSSQVLNEIQECK 137

Query: 289 RTYPNAYIRCIAFDNKRHMQSMAFVIQKPAAST 191
           R YPNAYIRCIAFDN RHMQSMAF+IQKPAA+T
Sbjct: 138 RAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANT 170


>gb|AFK37376.1| unknown [Lotus japonicus]
          Length = 173

 Score =  281 bits (720), Expect = 1e-73
 Identities = 130/153 (84%), Positives = 138/153 (90%)
 Frame = -2

Query: 649 LKSNSSNLCLSTGSIEWKRKTVTNGSKTHCMKTWNPINNRKFETLSYLPPLSDDSIAKEI 470
           LKSNSSNL   TG  EWK KT +NGSKT CMKTWNPINNRKFETLSYLPPL+D+SIAKE+
Sbjct: 18  LKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFETLSYLPPLTDESIAKEV 77

Query: 469 DYMLKKGWTPCLEFDELGYIHRENSQMPGYYDGRYWTLWKLPMFGCTDSSQVLNEIHECK 290
           DYMLKKGW PCLEFDELG+I RENS+MPGYYDGRYWTLWKLPMF C DSSQVLNEI ECK
Sbjct: 78  DYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPMFDCNDSSQVLNEIQECK 137

Query: 289 RTYPNAYIRCIAFDNKRHMQSMAFVIQKPAAST 191
           R YPNAYIRCIAFDN RHMQSMAF+IQKPAA+T
Sbjct: 138 RAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANT 170


>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
           gi|255632934|gb|ACU16821.1| unknown [Glycine max]
          Length = 172

 Score =  281 bits (718), Expect = 2e-73
 Identities = 126/153 (82%), Positives = 138/153 (90%)
 Frame = -2

Query: 649 LKSNSSNLCLSTGSIEWKRKTVTNGSKTHCMKTWNPINNRKFETLSYLPPLSDDSIAKEI 470
           LKSNSSNLC STG I WKRK V+NGSKT+CMKTWNPINN+KFETLSYLPPLSD+SIAKEI
Sbjct: 18  LKSNSSNLCPSTGPIGWKRKIVSNGSKTYCMKTWNPINNKKFETLSYLPPLSDESIAKEI 77

Query: 469 DYMLKKGWTPCLEFDELGYIHRENSQMPGYYDGRYWTLWKLPMFGCTDSSQVLNEIHECK 290
           DYMLKKGW PCLEFDELG + RENS MP YYDGRYWTLWKLPMF C+DSSQVL EIHEC+
Sbjct: 78  DYMLKKGWIPCLEFDELGCVRRENSHMPEYYDGRYWTLWKLPMFACSDSSQVLKEIHECR 137

Query: 289 RTYPNAYIRCIAFDNKRHMQSMAFVIQKPAAST 191
           R YPNAYIRC+AFDN+RHMQSMAF++ KP  +T
Sbjct: 138 RVYPNAYIRCLAFDNQRHMQSMAFIVHKPDITT 170


>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Vitis vinifera]
           gi|297735404|emb|CBI17844.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  269 bits (687), Expect = 7e-70
 Identities = 120/152 (78%), Positives = 133/152 (87%)
 Frame = -2

Query: 649 LKSNSSNLCLSTGSIEWKRKTVTNGSKTHCMKTWNPINNRKFETLSYLPPLSDDSIAKEI 470
           LK +   L  +  S+ W RKTV+NGSKTHCMKTWNPINN+KFETLSYLPPLSDDSIAKEI
Sbjct: 18  LKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEI 77

Query: 469 DYMLKKGWTPCLEFDELGYIHRENSQMPGYYDGRYWTLWKLPMFGCTDSSQVLNEIHECK 290
           DYMLKKGW PCLEFDE+GY+ R+NSQ+PGYYDGRYWTLWKLPMFGC D+SQVLNEIHECK
Sbjct: 78  DYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRYWTLWKLPMFGCNDASQVLNEIHECK 137

Query: 289 RTYPNAYIRCIAFDNKRHMQSMAFVIQKPAAS 194
           +TYPNAYIRC+AFDN+   Q MAFVIQKP  S
Sbjct: 138 KTYPNAYIRCLAFDNEHQGQCMAFVIQKPTCS 169


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