BLASTX nr result

ID: Glycyrrhiza23_contig00001632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001632
         (1528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522433.1| PREDICTED: probable CCR4-associated factor 1...   524   e-146
ref|XP_003526204.1| PREDICTED: probable CCR4-associated factor 1...   521   e-145
ref|XP_002515442.1| ccr4-associated factor, putative [Ricinus co...   511   e-142
ref|XP_002324905.1| predicted protein [Populus trichocarpa] gi|2...   507   e-141
ref|XP_002309667.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140

>ref|XP_003522433.1| PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Glycine
            max]
          Length = 273

 Score =  524 bits (1349), Expect = e-146
 Identities = 250/267 (93%), Positives = 262/267 (98%)
 Frame = +3

Query: 462  MSISPKEDSVQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNINDY 641
            MSI PK DSVQIREVWNDNLEEEFALIREIVD +NYVAMDTEFPGVVLRPVGNFKNINDY
Sbjct: 1    MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 642  NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDSPCIWQFNFREFNITEDIFASDSIEL 821
            NYQTLKDNVDMLKLIQLGLTFSDE+GNLPTCGT+SPCIWQFNFREFN++EDIFASDSIEL
Sbjct: 61   NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESPCIWQFNFREFNVSEDIFASDSIEL 120

Query: 822  LRQCGIDFKKNSEKGIDVNRFGELLMSSGVVLNDAVNWVTFHSGYDFGYLLKLLTCRTLP 1001
            LRQCGIDFKKNSE GIDVNRFGELLMSSG+VLND+V WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121  LRQCGIDFKKNSENGIDVNRFGELLMSSGIVLNDSVRWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 1002 DTQAGFFDLIKIYFPMIYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA 1181
            DTQAGFFDLIK+YFPM+YDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT+
Sbjct: 181  DTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 1182 CTFRKLRDTYFSGSTEKYAGVLYGLGV 1262
            CTFRKLRDT+FSGSTEKYAGVLYGLGV
Sbjct: 241  CTFRKLRDTFFSGSTEKYAGVLYGLGV 267


>ref|XP_003526204.1| PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Glycine
            max]
          Length = 273

 Score =  521 bits (1342), Expect = e-145
 Identities = 250/267 (93%), Positives = 262/267 (98%)
 Frame = +3

Query: 462  MSISPKEDSVQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNINDY 641
            MSI PK DSVQIREVWNDNLEEEFALIREIVD +NYVAMDTEFPGVVLRPVGNFKNINDY
Sbjct: 1    MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 642  NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDSPCIWQFNFREFNITEDIFASDSIEL 821
            NYQTLKDNVDMLKLIQLGLTFSDE+GNLPTCGT+S CIWQFNFREFNI+EDIFASDSIEL
Sbjct: 61   NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESTCIWQFNFREFNISEDIFASDSIEL 120

Query: 822  LRQCGIDFKKNSEKGIDVNRFGELLMSSGVVLNDAVNWVTFHSGYDFGYLLKLLTCRTLP 1001
            LRQCGIDFKKNSEKGIDVNRFGELLMSSG+VLNDAV+WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121  LRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 1002 DTQAGFFDLIKIYFPMIYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA 1181
            +TQAGFFDLIK+YFPM+YDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT+
Sbjct: 181  ETQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 1182 CTFRKLRDTYFSGSTEKYAGVLYGLGV 1262
            CTFRKLRD +FSGSTEKYAGVLYGLGV
Sbjct: 241  CTFRKLRDAFFSGSTEKYAGVLYGLGV 267


>ref|XP_002515442.1| ccr4-associated factor, putative [Ricinus communis]
            gi|223545386|gb|EEF46891.1| ccr4-associated factor,
            putative [Ricinus communis]
          Length = 274

 Score =  511 bits (1317), Expect = e-142
 Identities = 243/267 (91%), Positives = 257/267 (96%)
 Frame = +3

Query: 462  MSISPKEDSVQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNINDY 641
            MSI PK DS+ IREVWNDNLEEEF LIREIVD+FNYVAMDTEFPGVVLRPVGNFKNINDY
Sbjct: 1    MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 642  NYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDSPCIWQFNFREFNITEDIFASDSIEL 821
            NYQTLKDNVDMLKLIQLGLTFSDE+GNLPTCGTD  CIWQFNFREFNI+EDIFASDSIEL
Sbjct: 61   NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 822  LRQCGIDFKKNSEKGIDVNRFGELLMSSGVVLNDAVNWVTFHSGYDFGYLLKLLTCRTLP 1001
            LRQCGIDFKKN+EKGIDVNRFGEL+MSSG+VLND V+WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121  LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 1002 DTQAGFFDLIKIYFPMIYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA 1181
            DTQAGFFDLI  YFPM+YDIKHLMKFCNSLHGGLNKLAELLEVERVG+CHQAGSDSLLT+
Sbjct: 181  DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 1182 CTFRKLRDTYFSGSTEKYAGVLYGLGV 1262
            CTFRKLRD +F+GSTEKYAGVLYGLGV
Sbjct: 241  CTFRKLRDNFFNGSTEKYAGVLYGLGV 267


>ref|XP_002324905.1| predicted protein [Populus trichocarpa] gi|222866339|gb|EEF03470.1|
            predicted protein [Populus trichocarpa]
          Length = 275

 Score =  507 bits (1306), Expect = e-141
 Identities = 243/268 (90%), Positives = 260/268 (97%), Gaps = 1/268 (0%)
 Frame = +3

Query: 462  MSISP-KEDSVQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNIND 638
            MSI+P KEDS+QIREVWNDNLEEEFALIREIVD+FN+VAMDTEFPGVVLRPVGNFKNI+D
Sbjct: 1    MSIAPPKEDSIQIREVWNDNLEEEFALIREIVDQFNHVAMDTEFPGVVLRPVGNFKNISD 60

Query: 639  YNYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDSPCIWQFNFREFNITEDIFASDSIE 818
            YNYQTLKDNVDMLKLIQLGLTFSDE+GNLPTCGTD  CIWQFNFREFN+TEDIFASDSIE
Sbjct: 61   YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVTEDIFASDSIE 120

Query: 819  LLRQCGIDFKKNSEKGIDVNRFGELLMSSGVVLNDAVNWVTFHSGYDFGYLLKLLTCRTL 998
            LLRQCGIDFKKNSE GIDVNRFGELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+L
Sbjct: 121  LLRQCGIDFKKNSEMGIDVNRFGELLMSSGIVLNDGVNWVTFHSGYDFGYLLKLLTCRSL 180

Query: 999  PDTQAGFFDLIKIYFPMIYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 1178
            PD+QAGFFDLI +YFPM+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181  PDSQAGFFDLINMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240

Query: 1179 ACTFRKLRDTYFSGSTEKYAGVLYGLGV 1262
            + TF+KL+D +FSGSTEKYAGVLYGLGV
Sbjct: 241  SSTFKKLKDNFFSGSTEKYAGVLYGLGV 268


>ref|XP_002309667.1| predicted protein [Populus trichocarpa] gi|222855643|gb|EEE93190.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  504 bits (1299), Expect = e-140
 Identities = 240/269 (89%), Positives = 260/269 (96%), Gaps = 1/269 (0%)
 Frame = +3

Query: 459  EMSISP-KEDSVQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNIN 635
            EMSI+P KE+S+QIREVWNDNLEEEFALIREIVD+FN+VAMDTEFPGVVLRPVGNFKNIN
Sbjct: 2    EMSIAPPKEESIQIREVWNDNLEEEFALIREIVDQFNFVAMDTEFPGVVLRPVGNFKNIN 61

Query: 636  DYNYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDSPCIWQFNFREFNITEDIFASDSI 815
            DYNYQTLKDNVDMLKLIQLGLTFSDE+GNLPTCGTD  CIWQFNFREFN+T+DIFASDSI
Sbjct: 62   DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVTKDIFASDSI 121

Query: 816  ELLRQCGIDFKKNSEKGIDVNRFGELLMSSGVVLNDAVNWVTFHSGYDFGYLLKLLTCRT 995
            ELLRQCGIDFK N+EKGIDVN+FGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTCR+
Sbjct: 122  ELLRQCGIDFKMNNEKGIDVNQFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRS 181

Query: 996  LPDTQAGFFDLIKIYFPMIYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 1175
            LPDT AGFFDLI +YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 182  LPDTPAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 241

Query: 1176 TACTFRKLRDTYFSGSTEKYAGVLYGLGV 1262
            T+CTFRKLRD +F+GS EKYAGVLYGLGV
Sbjct: 242  TSCTFRKLRDNFFNGSAEKYAGVLYGLGV 270


Top