BLASTX nr result

ID: Glycyrrhiza23_contig00001618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001618
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycin...   268   1e-69
gb|AFK46964.1| unknown [Lotus japonicus]                              267   1e-69
ref|XP_003598690.1| hypothetical protein MTR_3g019320 [Medicago ...   266   2e-69
ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycin...   257   1e-66
ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63

>ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycine max]
           gi|255627865|gb|ACU14277.1| unknown [Glycine max]
          Length = 177

 Score =  268 bits (684), Expect = 1e-69
 Identities = 140/176 (79%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
 Frame = -2

Query: 691 SITCITHKPITSNXXXXXXXXXXXXXXXXSRFLGIRKRAGWRLGLTSKI-GPSNGSRVTC 515
           SI+CITH PITS                 SRFLG RKR G    LTS+I GPSNGS+ TC
Sbjct: 3   SISCITHHPITSKLNNAFSSPHVSASNLASRFLGTRKRVGLH-SLTSRIIGPSNGSKATC 61

Query: 514 WFRFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPV 335
           WFRFGKNGVDA+GAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPV
Sbjct: 62  WFRFGKNGVDAKGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPV 121

Query: 334 DILLLLAVSEGDKPKIEELLRAGAKYDVKDADGRTALERANDETKDFILNFSVQRA 167
           DILLLLA SE DKPKIEELLRAGAKYDVKDADGRTAL+RA DE KDFILNFSVQRA
Sbjct: 122 DILLLLAASESDKPKIEELLRAGAKYDVKDADGRTALDRATDEIKDFILNFSVQRA 177


>gb|AFK46964.1| unknown [Lotus japonicus]
          Length = 175

 Score =  267 bits (683), Expect = 1e-69
 Identities = 138/175 (78%), Positives = 144/175 (82%)
 Frame = -2

Query: 691 SITCITHKPITSNXXXXXXXXXXXXXXXXSRFLGIRKRAGWRLGLTSKIGPSNGSRVTCW 512
           SI CITH+PITS                   FLGIR+R G  L LTS IGPSNGS+ TCW
Sbjct: 4   SIACITHQPITSRLNSLPSPVSSLNLASG--FLGIRRRVGC-LRLTSSIGPSNGSKATCW 60

Query: 511 FRFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD 332
           FRFGKNGVDAEGAGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQ IHPVD
Sbjct: 61  FRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHPVD 120

Query: 331 ILLLLAVSEGDKPKIEELLRAGAKYDVKDADGRTALERANDETKDFILNFSVQRA 167
           ILLLLA SEGD PKIEELLRAGAKYDV+D DGRTAL+RANDE KDFILNFSVQRA
Sbjct: 121 ILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDRANDEVKDFILNFSVQRA 175


>ref|XP_003598690.1| hypothetical protein MTR_3g019320 [Medicago truncatula]
           gi|355487738|gb|AES68941.1| hypothetical protein
           MTR_3g019320 [Medicago truncatula]
           gi|388518635|gb|AFK47379.1| unknown [Medicago
           truncatula]
          Length = 179

 Score =  266 bits (681), Expect = 2e-69
 Identities = 139/177 (78%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
 Frame = -2

Query: 691 SITCITHKPITSNXXXXXXXXXXXXXXXXSRFLGIR-KRAGWRLG-LTSKIGPSNGSRVT 518
           SITCITH+PI SN                SRFLGIR K   W     TSK GPSNGSR T
Sbjct: 3   SITCITHQPIISNSKSLITSQVSSTNLSSSRFLGIRVKSVRWSSSSFTSKFGPSNGSRFT 62

Query: 517 CWFRFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP 338
           CWF+FGKNGVDAEGAGIYGSQ+RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQ IHP
Sbjct: 63  CWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHP 122

Query: 337 VDILLLLAVSEGDKPKIEELLRAGAKYDVKDADGRTALERANDETKDFILNFSVQRA 167
           VDILLLLA SEGD PKIEELL+AGAKYDVKDADGRTAL+RAN E KDFILNFSVQRA
Sbjct: 123 VDILLLLASSEGDLPKIEELLKAGAKYDVKDADGRTALDRANSEVKDFILNFSVQRA 179


>ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycine max]
           gi|255630625|gb|ACU15672.1| unknown [Glycine max]
          Length = 181

 Score =  257 bits (657), Expect = 1e-66
 Identities = 139/180 (77%), Positives = 144/180 (80%), Gaps = 5/180 (2%)
 Frame = -2

Query: 691 SITCITHK--PITSNXXXXXXXXXXXXXXXXS--RFLGIRKRAGWRLGLTSKI-GPSNGS 527
           SI CITH   PITSN                   RFLG R+R G    LTS+I GPSNGS
Sbjct: 3   SIPCITHHHHPITSNPNNNNAFPSPHVSASNLASRFLGTRRRVGSH-SLTSRIIGPSNGS 61

Query: 526 RVTCWFRFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQN 347
           + TCWFRFGKNGVDA+GAGIYGSQ RDDFDRDDVEQYFNYMGML VEGTYDKMEALLSQN
Sbjct: 62  KSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLTVEGTYDKMEALLSQN 121

Query: 346 IHPVDILLLLAVSEGDKPKIEELLRAGAKYDVKDADGRTALERANDETKDFILNFSVQRA 167
           IHPVDILLLLA SEGDKPKIEELLRAGAKYDVKDADGRTAL+RA DE KDFILNFSVQRA
Sbjct: 122 IHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAADEIKDFILNFSVQRA 181


>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  246 bits (627), Expect = 4e-63
 Identities = 119/145 (82%), Positives = 130/145 (89%)
 Frame = -2

Query: 601 RFLGIRKRAGWRLGLTSKIGPSNGSRVTCWFRFGKNGVDAEGAGIYGSQTRDDFDRDDVE 422
           +FLG++   GW      +IGPSNGSR  CWF+FGKNGVDAEGAGIYGSQTRDDFDRDDVE
Sbjct: 29  QFLGLQSNVGWLR--PCRIGPSNGSRAKCWFKFGKNGVDAEGAGIYGSQTRDDFDRDDVE 86

Query: 421 QYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAVSEGDKPKIEELLRAGAKYDVKDA 242
           QYFNYMGMLAVEGTYDKMEALLSQNIHPVDILL+LA SEGDKPKIEELLRAGA YD+KDA
Sbjct: 87  QYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGAGYDIKDA 146

Query: 241 DGRTALERANDETKDFILNFSVQRA 167
           DGRTAL+RAN+ETKDFIL  SV++A
Sbjct: 147 DGRTALDRANEETKDFILGLSVRKA 171


Top