BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001611
         (1807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   525   e-146
ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   511   e-142
ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g1...   477   e-132
ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago trunca...   474   e-131
ref|XP_002509740.1| cleavage and polyadenylation specificity fac...   468   e-129

>ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 380

 Score =  525 bits (1353), Expect = e-146
 Identities = 269/379 (70%), Positives = 293/379 (77%), Gaps = 1/379 (0%)
 Frame = -3

Query: 1622 TTRSPNRSSEDAADPTPLIXXXXXXXXXXXRFIRGASLRQAARFLRQASGRRLMREPSMV 1443
            TTRSPNRSSEDAADPTP +           R +R  SLR+AARFLRQASGRRLMREPSMV
Sbjct: 4    TTRSPNRSSEDAADPTPFLGTSSDESTSGRRLLRRPSLREAARFLRQASGRRLMREPSMV 63

Query: 1442 VRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXLSRSESPSMPLRLWILGY 1263
            VRE AAEQLEERQSDWAYSKPVVVLD+LWN            LSR+E+P+MPLRLWI+GY
Sbjct: 64   VREAAAEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFILSRNENPNMPLRLWIVGY 123

Query: 1262 ALQXXXXXXXXXVEYXXXXXXREQSNANAXXXXXXXXXXXXXXXXXXGHYVNLSQFGDDD 1083
            ALQ         VEY      REQSNA A                  GHYV+L+QF DDD
Sbjct: 124  ALQCVLHVACVCVEYQRRLRRREQSNA-AAIAGGGSGDLGPPSMDGSGHYVSLAQF-DDD 181

Query: 1082 GTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXXXXFCI 903
            G SMAKHLESANTMFSFIWW++GFYWVSAD ++L++DSP LYWLCI           FC+
Sbjct: 182  GISMAKHLESANTMFSFIWWVVGFYWVSADSESLVRDSPLLYWLCIAFLGFDVFFVVFCM 241

Query: 902  ALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLAGNTQGPV 726
            ALACI+GIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+FQR + NEKLAGNTQG  
Sbjct: 242  ALACIVGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKLAGNTQGAA 301

Query: 725  GGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINAT 546
            GGIM EC  D PIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINAT
Sbjct: 302  GGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINAT 361

Query: 545  CPLCKYNILKSSSNGQEEV 489
            CPLCKYNILKS+S+ Q+EV
Sbjct: 362  CPLCKYNILKSTSHAQDEV 380


>ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
          Length = 379

 Score =  511 bits (1317), Expect = e-142
 Identities = 266/380 (70%), Positives = 286/380 (75%), Gaps = 2/380 (0%)
 Frame = -3

Query: 1622 TTRSPNRSSEDAA-DPTPLIXXXXXXXXXXXRFIRGASLRQAARFLRQASGRRLMREPSM 1446
            TTRSPNRSSEDAA DPTP +             +R  SLR+AARFLRQASGRRLMREPSM
Sbjct: 5    TTRSPNRSSEDAAADPTPFLATSSDESTSGRLLLRRPSLREAARFLRQASGRRLMREPSM 64

Query: 1445 VVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXLSRSESPSMPLRLWILG 1266
            VVRE AAEQLEERQSDWAYSKPVVVLD+LWN            LSR+E+P+MPLRLWI+G
Sbjct: 65   VVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAATVLVLSRNENPNMPLRLWIVG 124

Query: 1265 YALQXXXXXXXXXVEYXXXXXXREQSNANAXXXXXXXXXXXXXXXXXXGHYVNLSQFGDD 1086
            YALQ         VEY      RE SNA A                  GHYV+     DD
Sbjct: 125  YALQSVLHVACVCVEYRRRLRHREHSNA-AAVSGDGSGDLSSPSMDGSGHYVSF----DD 179

Query: 1085 DGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXXXXFC 906
            DG SMAKHLESANTMFSFIWW++GFYWVSAD +AL+QDSP LYWLCI           FC
Sbjct: 180  DGISMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDSPLLYWLCIAFLGFDVFFVVFC 239

Query: 905  IALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLAGNTQGP 729
            IALACIIGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+FQR + NEK AGNTQG 
Sbjct: 240  IALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKHAGNTQGA 299

Query: 728  VGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLHINA 549
             GGIM EC  D PIEHVLSDEDAECCICLSAYDDGVELR+LPC HHFHCACVDKWLHINA
Sbjct: 300  AGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVELRKLPCSHHFHCACVDKWLHINA 359

Query: 548  TCPLCKYNILKSSSNGQEEV 489
            TCPLCKYNILKS+S+GQ+EV
Sbjct: 360  TCPLCKYNILKSTSHGQDEV 379


>ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
          Length = 385

 Score =  477 bits (1228), Expect = e-132
 Identities = 249/389 (64%), Positives = 278/389 (71%), Gaps = 9/389 (2%)
 Frame = -3

Query: 1628 MATTRSPNRSSEDAADPTPLIXXXXXXXXXXXR---FIRGASLRQAARFLRQASGRRLMR 1458
            MATTRS   SSED  D TPL+               F R   LRQAARFLR+ASGRR+MR
Sbjct: 1    MATTRS---SSEDIVDSTPLLANSGGSSDELTSGRGFSRRQRLRQAARFLRRASGRRMMR 57

Query: 1457 EPSMVVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXLSRSESPSMPLRL 1278
            EPSM+VRE AAEQLEERQSDWAYSKPVVVLD++WN            LS SE+P MPLRL
Sbjct: 58   EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRL 117

Query: 1277 WILGYALQXXXXXXXXXVEYXXXXXXREQSNANAXXXXXXXXXXXXXXXXXXG-----HY 1113
            WI+GYA+Q         VEY      +  + ++                          Y
Sbjct: 118  WIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQY 177

Query: 1112 VNLSQFGDDDGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXX 933
            V+L Q  DD+GTS+AKHLESANTMFSF+WWIIGFYWVSA GQAL QDSPQLYWLCI    
Sbjct: 178  VSLGQL-DDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLG 236

Query: 932  XXXXXXXFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNE 756
                   FC+ALACIIGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+F+R + NE
Sbjct: 237  FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNE 296

Query: 755  KLAGNTQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCAC 576
            KL G  QGPVGGIMTEC  D PIEHVL++EDAECCICLS+YDDGVELR+LPCGHHFHC C
Sbjct: 297  KLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVC 356

Query: 575  VDKWLHINATCPLCKYNILKSSSNGQEEV 489
            VDKWL+INATCPLCKYNILKS++  QEEV
Sbjct: 357  VDKWLYINATCPLCKYNILKSNTLSQEEV 385


>ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
            gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase
            [Medicago truncatula] gi|388506770|gb|AFK41451.1| unknown
            [Medicago truncatula]
          Length = 387

 Score =  474 bits (1221), Expect = e-131
 Identities = 244/386 (63%), Positives = 273/386 (70%), Gaps = 11/386 (2%)
 Frame = -3

Query: 1613 SPNRSSEDAADPTPLIXXXXXXXXXXXRFIRGASLRQ----AARFLRQASGRRLMREPSM 1446
            +PNRSS D  D TP +               G   RQ    AARFLRQASGRR MREPS+
Sbjct: 3    TPNRSSSDIIDSTPFLTNPGNGSSSDDLNNSGRRRRQRLLQAARFLRQASGRRTMREPSV 62

Query: 1445 VVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXLSRSESPSMPLRLWILG 1266
            VVRE AAEQLEERQSDWAYSKPVV+LD++WN            LSR+E+P MPLRLWI G
Sbjct: 63   VVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAG 122

Query: 1265 YALQXXXXXXXXXVEYXXXXXXREQSNANAXXXXXXXXXXXXXXXXXXGH------YVNL 1104
            Y LQ          EY      +  S++NA                          YV+L
Sbjct: 123  YVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFSSREGSRSAVSGSSYVSL 182

Query: 1103 SQFGDDDGTSMAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXX 924
            +QF D++ TS+AKHLESANTMFSFIWWIIGFYWVSA GQAL QDSPQLYWLCI       
Sbjct: 183  AQF-DEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDV 241

Query: 923  XXXXFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQR-KGNEKLA 747
                FC+ALAC+IGIAVCCCLPCIIALLYAVADQEGA+KEDIEQLSKF+F++ + NEK  
Sbjct: 242  FFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRKVESNEKQT 301

Query: 746  GNTQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDK 567
             N QGPVGGIMTEC  D PIEHVL++EDAECCICLS+YDDGVELR+LPCGHHFHCACVDK
Sbjct: 302  DNNQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDK 361

Query: 566  WLHINATCPLCKYNILKSSSNGQEEV 489
            WL+INATCPLCKYNILKSS+ GQEEV
Sbjct: 362  WLYINATCPLCKYNILKSSNLGQEEV 387


>ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223549639|gb|EEF51127.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 383

 Score =  468 bits (1205), Expect = e-129
 Identities = 243/386 (62%), Positives = 274/386 (70%), Gaps = 4/386 (1%)
 Frame = -3

Query: 1634 SNMATTRSPNRSSEDAADPTPLIXXXXXXXXXXXRFIRGASLRQAARFLRQASGRRLMRE 1455
            +N  +  +P RS++D  D TPL+              R  SLR+AARFLR+AS RR+MRE
Sbjct: 4    TNPTSHPNPIRSNDDIVDTTPLLSSGSQGESNSSS--RRQSLREAARFLRRASSRRMMRE 61

Query: 1454 PSMVVRETAAEQLEERQSDWAYSKPVVVLDVLWNXXXXXXXXXXXXLSRSESPSMPLRLW 1275
            PSM+VRETAAEQLEERQSDWAYSKPVV+LD+LWN            +SR E PSMPLRLW
Sbjct: 62   PSMLVRETAAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLW 121

Query: 1274 ILGYALQXXXXXXXXXVEYXXXXXXREQSNANAXXXXXXXXXXXXXXXXXXGHYVNLSQF 1095
            I+GY LQ         VEY        +                       G YV L+Q 
Sbjct: 122  IVGYGLQCVLHMVCVCVEYRRR----RRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLAQL 177

Query: 1094 GDDDGTS-MAKHLESANTMFSFIWWIIGFYWVSADGQALLQDSPQLYWLCIXXXXXXXXX 918
             D DGTS +AKHLESANTMFSFIWWIIGFYWVSA GQAL  +SPQLYWLCI         
Sbjct: 178  EDHDGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFF 237

Query: 917  XXFCIALACIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFRFQRKGN-EKLAGN 741
              FC+ALACIIGIAVCCCLPCIIA+LYAVADQEGA+KEDIEQLSKF+F+R  N EKL GN
Sbjct: 238  VVFCVALACIIGIAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTGN 297

Query: 740  --TQGPVGGIMTECHVDCPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDK 567
               QGP+GG+MTEC  D P+EH+LS+EDAECCICLSAYDDGVELR+LPCGHHFHCACVDK
Sbjct: 298  GDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCACVDK 357

Query: 566  WLHINATCPLCKYNILKSSSNGQEEV 489
            WL+INATCPLCKYNILKSSS  +EEV
Sbjct: 358  WLYINATCPLCKYNILKSSSRDREEV 383