BLASTX nr result

ID: Glycyrrhiza23_contig00001580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001580
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545453.1| PREDICTED: elongation factor 1-beta 1-like [...   239   7e-61
ref|NP_001236537.1| uncharacterized protein LOC100500082 [Glycin...   236   5e-60
gb|ACU23742.1| unknown [Glycine max]                                  235   1e-59
gb|ACF06474.1| translation elongation factor EF-1 beta chain [El...   209   8e-52
ref|XP_002299649.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51

>ref|XP_003545453.1| PREDICTED: elongation factor 1-beta 1-like [Glycine max]
          Length = 223

 Score =  239 bits (610), Expect = 7e-61
 Identities = 129/192 (67%), Positives = 135/192 (70%)
 Frame = -1

Query: 956 TKDDIKVYAAVLEKPGDSFPSAAKWYDVVSSHLAASFPGNAQGVRFSXXXXXXXXXXXXX 777
           TKDDIKVYAAV+EKPGDSFP+AAKWYD VSS LA SFPG+AQGVRFS             
Sbjct: 33  TKDDIKVYAAVVEKPGDSFPNAAKWYDAVSSQLAPSFPGHAQGVRFSGAAAPAEAAPAKA 92

Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGKSSVLLDVKPWDDETDMK 597
                                                   SGKSSVLLDVKPWDDETDMK
Sbjct: 93  AATAEEDDDDLDLFGDETEEDKKAAEEREAAKKPAKKKE-SGKSSVLLDVKPWDDETDMK 151

Query: 596 KLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEERLTVEPCNEY 417
           KLEEAVRSIEMPGL WGASKLVPVGYGIKKLQIM+TIVDDLVSVD+L+EERLTVEPCNEY
Sbjct: 152 KLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLVEERLTVEPCNEY 211

Query: 416 IQSCDIVAFNKI 381
           IQSCDIVAFNKI
Sbjct: 212 IQSCDIVAFNKI 223


>ref|NP_001236537.1| uncharacterized protein LOC100500082 [Glycine max]
           gi|255629025|gb|ACU14857.1| unknown [Glycine max]
          Length = 223

 Score =  236 bits (603), Expect = 5e-60
 Identities = 127/192 (66%), Positives = 134/192 (69%)
 Frame = -1

Query: 956 TKDDIKVYAAVLEKPGDSFPSAAKWYDVVSSHLAASFPGNAQGVRFSXXXXXXXXXXXXX 777
           TKDDIKVYAAV+EKPGD+FP+AAKWYD VSS LA SFPG+AQGVRFS             
Sbjct: 33  TKDDIKVYAAVVEKPGDTFPNAAKWYDAVSSQLAPSFPGHAQGVRFSGAAAPAEAAPAKA 92

Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGKSSVLLDVKPWDDETDMK 597
                                                   SGKSSVLLDVKPWDDETDMK
Sbjct: 93  AATAEEDDDDLDLFGDETEEDKKAAEEREAAKKPAKKKE-SGKSSVLLDVKPWDDETDMK 151

Query: 596 KLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEERLTVEPCNEY 417
           KLEE VRSIEMPGL WGASKLVPVGYGIKKLQIM+TIVDDLVSVD+L+EERLTVEPCNEY
Sbjct: 152 KLEETVRSIEMPGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDTLVEERLTVEPCNEY 211

Query: 416 IQSCDIVAFNKI 381
           IQSCDIVAFNKI
Sbjct: 212 IQSCDIVAFNKI 223


>gb|ACU23742.1| unknown [Glycine max]
          Length = 223

 Score =  235 bits (600), Expect = 1e-59
 Identities = 127/192 (66%), Positives = 134/192 (69%)
 Frame = -1

Query: 956 TKDDIKVYAAVLEKPGDSFPSAAKWYDVVSSHLAASFPGNAQGVRFSXXXXXXXXXXXXX 777
           TKDDIKVYAAV+EKPGDSFP+AAKWYD VSS LA SFPG+AQGVRFS             
Sbjct: 33  TKDDIKVYAAVVEKPGDSFPNAAKWYDAVSSQLAPSFPGHAQGVRFSGAAAPAEAAPAKA 92

Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGKSSVLLDVKPWDDETDMK 597
                                                   SGK SVLLDVKPWDDETDMK
Sbjct: 93  AATAEEDDDDLDLFGDETEEDKKAAEEREAAKKPAKKKE-SGKFSVLLDVKPWDDETDMK 151

Query: 596 KLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEERLTVEPCNEY 417
           KLEEAVRSIEMPGL WGASKLVPVGYGIKKL+IM+TIVDDLVSVD+L+EERLTVEPCNEY
Sbjct: 152 KLEEAVRSIEMPGLLWGASKLVPVGYGIKKLRIMMTIVDDLVSVDTLVEERLTVEPCNEY 211

Query: 416 IQSCDIVAFNKI 381
           IQSCDIVAFNKI
Sbjct: 212 IQSCDIVAFNKI 223


>gb|ACF06474.1| translation elongation factor EF-1 beta chain [Elaeis guineensis]
          Length = 224

 Score =  209 bits (532), Expect = 8e-52
 Identities = 112/192 (58%), Positives = 126/192 (65%)
 Frame = -1

Query: 956 TKDDIKVYAAVLEKPGDSFPSAAKWYDVVSSHLAASFPGNAQGVRFSXXXXXXXXXXXXX 777
           T+DDIKV+AAV ++PG  FP+  +WY+ VSS +A  F GNA GV+ +             
Sbjct: 33  TRDDIKVFAAVSKRPGGEFPNVCRWYESVSSIIAPRFLGNAVGVKITSQAASLAPAPAAE 92

Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGKSSVLLDVKPWDDETDMK 597
                                                  ESGKSSVL+D+KPWDDETDMK
Sbjct: 93  SAKATEDDDDIDLFGEETEEEKKVAAEREAAVKASSKKKESGKSSVLMDIKPWDDETDMK 152

Query: 596 KLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEERLTVEPCNEY 417
           KLEEAVRSIEMPGL WGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEE LTVEPC+EY
Sbjct: 153 KLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEDLTVEPCSEY 212

Query: 416 IQSCDIVAFNKI 381
           +QSCDIVAFNKI
Sbjct: 213 VQSCDIVAFNKI 224


>ref|XP_002299649.1| predicted protein [Populus trichocarpa] gi|222846907|gb|EEE84454.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  209 bits (531), Expect = 1e-51
 Identities = 115/193 (59%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
 Frame = -1

Query: 956 TKDDIKVYAAVLEKPGDSFPSAAKWYDVVSSHLAASFPGNAQGVRFSXXXXXXXXXXXXX 777
           +KDDIKVY AVLE PGD+F +A+KWYD VSS LA+SFPG A GVR               
Sbjct: 33  SKDDIKVYGAVLENPGDAFTNASKWYDSVSSQLASSFPGKATGVRVGAAAAAPVEAAPAK 92

Query: 776 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGKSS-VLLDVKPWDDETDM 600
                                                  +    S VLLDVKPWDDETDM
Sbjct: 93  EAAGDDDDDDDLDLFGDETEEDKKAAEEREKAKKGSSKKKESGKSSVLLDVKPWDDETDM 152

Query: 599 KKLEEAVRSIEMPGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEERLTVEPCNE 420
             LE+AVRSIEMPGLFWGASKL PVGYGIKKLQIMLTI+DDLVSVDSLIEERLTVEPC+E
Sbjct: 153 VALEKAVRSIEMPGLFWGASKLAPVGYGIKKLQIMLTIIDDLVSVDSLIEERLTVEPCSE 212

Query: 419 YIQSCDIVAFNKI 381
           YIQSCDIVAFNKI
Sbjct: 213 YIQSCDIVAFNKI 225


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