BLASTX nr result

ID: Glycyrrhiza23_contig00001577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001577
         (1484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit ...   339   e-108
ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit ...   335   e-106
gb|AFK41427.1| unknown [Medicago truncatula]                          322   e-102
ref|XP_002511587.1| cop9 complex subunit 7a, putative [Ricinus c...   326   8e-87
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ...   322   2e-85

>ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  339 bits (870), Expect(2) = e-108
 Identities = 175/223 (78%), Positives = 185/223 (82%)
 Frame = +3

Query: 237 MDIEQKQSELIDHFVKQXXXXXXXXXXXXXXXXXXXHPSLFAFAEILALPSVLQLETTEN 416
           MDIEQKQSELIDHFVK+                   HPSLFAF+EILALP++LQLE TEN
Sbjct: 1   MDIEQKQSELIDHFVKRASAASDAAALSSVLVEATSHPSLFAFSEILALPNLLQLEATEN 60

Query: 417 SAYLDMLRLFAHGTWSDFKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 596
           SAYLDMLRLFAHGTW+D+KSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL
Sbjct: 61  SAYLDMLRLFAHGTWNDYKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 120

Query: 597 DVTNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSNWLS 776
           DVTNVRELEDFLINECMYAGIVRGKLDQL+RCFEVQFAAGRDLRP QLG+MIQTLSNWLS
Sbjct: 121 DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSNWLS 180

Query: 777 TSENLLVSIQEKIKWADAMSENDXXXXXXXXXXXXXXXXSLFK 905
           TSEN+LVSIQEKIKWADAMSE D                S+FK
Sbjct: 181 TSENMLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSIFK 223



 Score = 79.7 bits (195), Expect(2) = e-108
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +2

Query: 968  ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 1075
            ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS
Sbjct: 224  ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 259


>ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  335 bits (859), Expect(2) = e-106
 Identities = 174/223 (78%), Positives = 184/223 (82%)
 Frame = +3

Query: 237 MDIEQKQSELIDHFVKQXXXXXXXXXXXXXXXXXXXHPSLFAFAEILALPSVLQLETTEN 416
           MDIEQKQSELIDHFVK+                   HPSLFAF+EILALP++LQLE TEN
Sbjct: 1   MDIEQKQSELIDHFVKRASAASDAAALASVLVEATSHPSLFAFSEILALPNLLQLEATEN 60

Query: 417 SAYLDMLRLFAHGTWSDFKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 596
           SAYLDMLRLFAHGTWSD+KSNADRLPQLI DQILKLKQLTVLTLAETYKVLPYDQLMQEL
Sbjct: 61  SAYLDMLRLFAHGTWSDYKSNADRLPQLISDQILKLKQLTVLTLAETYKVLPYDQLMQEL 120

Query: 597 DVTNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSNWLS 776
           DVTNVRELEDFLINECMYAGIVRGKLDQL+RCFEVQFAAGRDLRP QLG+MIQTLS+WL+
Sbjct: 121 DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSSWLT 180

Query: 777 TSENLLVSIQEKIKWADAMSENDXXXXXXXXXXXXXXXXSLFK 905
           TSENLLVSIQEKIKWADAMSE D                S+FK
Sbjct: 181 TSENLLVSIQEKIKWADAMSEIDKKHRKEVEEKVEEVKKSIFK 223



 Score = 79.7 bits (195), Expect(2) = e-106
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +2

Query: 968  ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 1075
            ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS
Sbjct: 224  ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 259


>gb|AFK41427.1| unknown [Medicago truncatula]
          Length = 259

 Score =  322 bits (825), Expect(2) = e-102
 Identities = 165/223 (73%), Positives = 178/223 (79%)
 Frame = +3

Query: 237 MDIEQKQSELIDHFVKQXXXXXXXXXXXXXXXXXXXHPSLFAFAEILALPSVLQLETTEN 416
           MDIEQ+QSELID FVKQ                   HP LFAF+EILALP+VLQLE T+ 
Sbjct: 1   MDIEQRQSELIDQFVKQASAASNTSAISSVIVDATSHPLLFAFSEILALPNVLQLEATDE 60

Query: 417 SAYLDMLRLFAHGTWSDFKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 596
             YLD+LRLFAHG WSD+KSNADRLPQL+PDQILKLKQLTVLTL ETYKVLPYDQLMQEL
Sbjct: 61  EFYLDLLRLFAHGIWSDYKSNADRLPQLVPDQILKLKQLTVLTLVETYKVLPYDQLMQEL 120

Query: 597 DVTNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSNWLS 776
           DVTNVRELEDFLINECMYAGIVRGKLDQL+RCFEVQFAAGRDLRPGQLG MIQTLS+WLS
Sbjct: 121 DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGDMIQTLSDWLS 180

Query: 777 TSENLLVSIQEKIKWADAMSENDXXXXXXXXXXXXXXXXSLFK 905
           TSEN+LVSIQ+KIKWAD+MSE D                S+FK
Sbjct: 181 TSENMLVSIQDKIKWADSMSEVDKKHRKEVEEKVDEVKKSIFK 223



 Score = 78.6 bits (192), Expect(2) = e-102
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +2

Query: 968  ADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 1075
            ADIDFRGHEEIC+ESGGVMDYEEDRSRPKRRRHPIS
Sbjct: 224  ADIDFRGHEEICAESGGVMDYEEDRSRPKRRRHPIS 259


>ref|XP_002511587.1| cop9 complex subunit 7a, putative [Ricinus communis]
            gi|223548767|gb|EEF50256.1| cop9 complex subunit 7a,
            putative [Ricinus communis]
          Length = 275

 Score =  326 bits (836), Expect = 8e-87
 Identities = 183/304 (60%), Positives = 203/304 (66%)
 Frame = +3

Query: 237  MDIEQKQSELIDHFVKQXXXXXXXXXXXXXXXXXXXHPSLFAFAEILALPSVLQLETTEN 416
            M+IEQKQ+ELIDHFVK                    HPSLFAF+EILA+P+V +LE  +N
Sbjct: 1    MEIEQKQAELIDHFVK-IASALKGSALGPVIVEATSHPSLFAFSEILAVPTVAELEGVDN 59

Query: 417  SAYLDMLRLFAHGTWSDFKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 596
            S YLD+LRLFAHGTW+D+K+N+ RLPQLIPDQ+LKLKQLTVLTLAET KVLPYDQLMQEL
Sbjct: 60   SVYLDVLRLFAHGTWTDYKNNSGRLPQLIPDQVLKLKQLTVLTLAETNKVLPYDQLMQEL 119

Query: 597  DVTNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSNWLS 776
            DVTNVRELEDFLINECMYAGIVRGKLDQL+RCFEVQFAAGRDLRP QLG+M+QTLSNWLS
Sbjct: 120  DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMLQTLSNWLS 179

Query: 777  TSENLLVSIQEKIKWADAMSENDXXXXXXXXXXXXXXXXSLFKXXXXXXXXXXXXXXXXX 956
            TSENLLVSIQEKIKWAD MSE D                +L                   
Sbjct: 180  TSENLLVSIQEKIKWADTMSELDKRHRKDVEDKVEEVKKTL------------------- 220

Query: 957  XXXRPTSTSEAMRRSALNLVE*WIMKKIEADQRGGGIQYLEDCSR*RSSLDGCSSCLPDF 1136
                    S  M    LN V  +          GGGIQY E   R R+S DG    +PDF
Sbjct: 221  --------SLKMELVLLN-VPFYCSTAEFGKNAGGGIQYPESIDRSRNSFDGFLGYMPDF 271

Query: 1137 YSWH 1148
            YSWH
Sbjct: 272  YSWH 275


>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
            vinifera]
          Length = 247

 Score =  322 bits (824), Expect = 2e-85
 Identities = 176/261 (67%), Positives = 188/261 (72%)
 Frame = +3

Query: 237  MDIEQKQSELIDHFVKQXXXXXXXXXXXXXXXXXXXHPSLFAFAEILALPSVLQLETTEN 416
            MDIEQ+Q+ELID FVKQ                   HPSLFAF+EILA+P+V++L  TEN
Sbjct: 1    MDIEQRQAELIDAFVKQASTHNGSALATVILDATS-HPSLFAFSEILAVPNVVELGGTEN 59

Query: 417  SAYLDMLRLFAHGTWSDFKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQEL 596
            S YLDMLRLFAHGTWSD+KSN DRLPQL+PDQ LKLKQLTVLTLAET KVLPYDQLMQEL
Sbjct: 60   SVYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQEL 119

Query: 597  DVTNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSNWLS 776
            DVTNVRELEDFLINECMYAGIVRGKLDQL+RCFEVQFAAGRDLRPGQLG MIQTLSNWL 
Sbjct: 120  DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLG 179

Query: 777  TSENLLVSIQEKIKWADAMSENDXXXXXXXXXXXXXXXXSLFKXXXXXXXXXXXXXXXXX 956
            TS+NLL+SIQEKIKWAD MSE D                S                    
Sbjct: 180  TSDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSF-------------SVKKLH 226

Query: 957  XXXRPTSTSEAMRRSALNLVE 1019
               RPT TSE  RRS LNLVE
Sbjct: 227  TVSRPTLTSEGTRRSTLNLVE 247


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