BLASTX nr result

ID: Glycyrrhiza23_contig00001566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001566
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153746.1| PREDICTED: 40S ribosomal protein S13-like [C...   296   3e-78
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   296   4e-78
gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK4889...   296   5e-78
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C...   295   6e-78
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   295   8e-78

>ref|XP_004153746.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449498912|ref|XP_004160669.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  296 bits (759), Expect = 3e-78
 Identities = 148/151 (98%), Positives = 149/151 (98%)
 Frame = -3

Query: 734 MGRMHSHGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 555
           MGRMHS GKGIS+SALPYKRTPPSWLKISSQDV ENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVAENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 554 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 375
           AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 374 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 282
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  296 bits (758), Expect = 4e-78
 Identities = 148/151 (98%), Positives = 149/151 (98%)
 Frame = -3

Query: 734 MGRMHSHGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 555
           MGRMHS GKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 554 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 375
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 374 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 282
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK48894.1| unknown
           [Lotus japonicus]
          Length = 151

 Score =  296 bits (757), Expect = 5e-78
 Identities = 147/151 (97%), Positives = 150/151 (99%)
 Frame = -3

Query: 734 MGRMHSHGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 555
           MGRMHS GKGISSSALPYKRTPPSWLKI+SQDVEENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 554 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 375
           AQV+SVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 374 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 282
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  295 bits (756), Expect = 6e-78
 Identities = 147/151 (97%), Positives = 149/151 (98%)
 Frame = -3

Query: 734 MGRMHSHGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 555
           MGRMHS GKGIS+SALPYKRTPPSWLKISS DVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 554 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 375
           AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 374 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 282
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  295 bits (755), Expect = 8e-78
 Identities = 146/151 (96%), Positives = 150/151 (99%)
 Frame = -3

Query: 734 MGRMHSHGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 555
           MGRMHS GKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 554 AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 375
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 374 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 282
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


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