BLASTX nr result

ID: Glycyrrhiza23_contig00001547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001547
         (1604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   542   e-151
ref|XP_003617180.1| Thioredoxin-related protein [Medicago trunca...   525   e-146
ref|XP_003617178.1| Thioredoxin-related protein [Medicago trunca...   525   e-146
gb|AFK46565.1| unknown [Medicago truncatula]                          521   e-145
ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   514   e-143

>ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356554227|ref|XP_003545450.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max] gi|356554229|ref|XP_003545451.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 3 [Glycine
            max] gi|356554231|ref|XP_003545452.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 4 [Glycine
            max]
          Length = 336

 Score =  542 bits (1396), Expect = e-151
 Identities = 267/340 (78%), Positives = 278/340 (81%), Gaps = 7/340 (2%)
 Frame = +2

Query: 326  MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQH--TFSSNSGEFHQM 499
            MSSGATHWC+AC QPIVL+GRD VCPYCDGGFVQEL+ELRGIAP H  TFSS SG+FHQM
Sbjct: 1    MSSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQM 60

Query: 500  PDLFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXXEQGW 679
            PD+FDAIHAFMG RGSD R GL+DAVDNFMRHRMAGR+ NFD              EQ W
Sbjct: 61   PDIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAGRNSNFDVRGRSGSLPVP---EQSW 117

Query: 680  GVYSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDQHGPP 853
            GVYSSGPYLIFH GQ  GFT S GSPRGGPRRVDFGDYFMG GLEELIEQLTMNDQ GP 
Sbjct: 118  GVYSSGPYLIFH-GQVPGFTLSAGSPRGGPRRVDFGDYFMGPGLEELIEQLTMNDQRGPA 176

Query: 854  PAARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQH 1033
            PAARSSIDAMPTIKITQAHLR DSHCPVCKEKFELG+EAREMPCNHIYHSDCIVPWLVQH
Sbjct: 177  PAARSSIDAMPTIKITQAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQH 236

Query: 1034 NSCPVCRVELPPQGHVXXXXXXXXXXXXXXXXXXT---DSSRGSRENDHQNHGRRNPLSF 1204
            NSCPVCRVELPPQG                    +   DSSRG REN HQNHGRRNP SF
Sbjct: 237  NSCPVCRVELPPQGQASSRGTRSWGGRNASNSSSSGSNDSSRG-RENSHQNHGRRNPFSF 295

Query: 1205 LWPFRSSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFD 1324
            LWPFRSS+SNNNHY+ETGGSSSST PDQNNGT YSGWPFD
Sbjct: 296  LWPFRSSNSNNNHYSETGGSSSSTTPDQNNGTSYSGWPFD 335


>ref|XP_003617180.1| Thioredoxin-related protein [Medicago truncatula]
            gi|355518515|gb|AET00139.1| Thioredoxin-related protein
            [Medicago truncatula]
          Length = 371

 Score =  525 bits (1353), Expect = e-146
 Identities = 255/336 (75%), Positives = 275/336 (81%), Gaps = 2/336 (0%)
 Frame = +2

Query: 326  MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 505
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 47   MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 106

Query: 506  LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXXEQGWGV 685
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 107  LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 163

Query: 686  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDQHGPPPA 859
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMND+ GPPPA
Sbjct: 164  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 222

Query: 860  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 1039
            ARSSIDAMPTI+ITQAHLR DSHCPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 223  ARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 282

Query: 1040 CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXXTDSSRGSRENDHQNHGRRNPLSFLWPFR 1219
            CPVCRVELPPQG +                    SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 283  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 335

Query: 1220 SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 1327
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 336  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 371


>ref|XP_003617178.1| Thioredoxin-related protein [Medicago truncatula]
            gi|355518513|gb|AET00137.1| Thioredoxin-related protein
            [Medicago truncatula]
          Length = 325

 Score =  525 bits (1353), Expect = e-146
 Identities = 255/336 (75%), Positives = 275/336 (81%), Gaps = 2/336 (0%)
 Frame = +2

Query: 326  MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 505
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 1    MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 60

Query: 506  LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXXEQGWGV 685
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 61   LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 117

Query: 686  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDQHGPPPA 859
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMND+ GPPPA
Sbjct: 118  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 176

Query: 860  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 1039
            ARSSIDAMPTI+ITQAHLR DSHCPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 177  ARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 236

Query: 1040 CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXXTDSSRGSRENDHQNHGRRNPLSFLWPFR 1219
            CPVCRVELPPQG +                    SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 237  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 289

Query: 1220 SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 1327
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 290  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 325


>gb|AFK46565.1| unknown [Medicago truncatula]
          Length = 325

 Score =  521 bits (1343), Expect = e-145
 Identities = 254/336 (75%), Positives = 274/336 (81%), Gaps = 2/336 (0%)
 Frame = +2

Query: 326  MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 505
            MSSGATHWC+ CN+PIVLEGRD VCPYCD GFVQELNE+RG APQ+TF S SGEF+QMPD
Sbjct: 1    MSSGATHWCYECNRPIVLEGRDVVCPYCDEGFVQELNEMRGTAPQNTFPSRSGEFNQMPD 60

Query: 506  LFDAIHAFMGHRGSDHRVGLIDAVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXXEQGWGV 685
            LFDAIHAF+GHRGSD+R GL+DAVDNFMRHRMAG HPNFD              EQGWGV
Sbjct: 61   LFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVP---EQGWGV 117

Query: 686  YSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDQHGPPPA 859
            YSSGP+L+FH GQ  G T  NGSPRGGPRR DFGDYFMG GLEELIEQLTMND+ GPPPA
Sbjct: 118  YSSGPFLVFH-GQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPA 176

Query: 860  ARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNS 1039
            ARSSIDAMPTI+ITQAHLR DS CPVCKEKFELGSEAREMPC+HIYHS+CIVPWLVQHNS
Sbjct: 177  ARSSIDAMPTIRITQAHLRSDSPCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNS 236

Query: 1040 CPVCRVELPPQGHVXXXXXXXXXXXXXXXXXXTDSSRGSRENDHQNHGRRNPLSFLWPFR 1219
            CPVCRVELPPQG +                    SSRG RE+D  N+GRRNP SFLWPFR
Sbjct: 237  CPVCRVELPPQGQM------SSRGSSRSNSGGNGSSRG-RESDRPNNGRRNPFSFLWPFR 289

Query: 1220 SSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFDN 1327
            SSSSNNN Y+ETGGSSSST  DQNNGTRY+GW +DN
Sbjct: 290  SSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 325


>ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            RING1-like [Glycine max]
          Length = 335

 Score =  514 bits (1325), Expect = e-143
 Identities = 254/339 (74%), Positives = 270/339 (79%), Gaps = 6/339 (1%)
 Frame = +2

Query: 326  MSSGATHWCHACNQPIVLEGRDFVCPYCDGGFVQELNELRGIAPQHTFSSNSGEFHQMPD 505
            MSSGATHWCHAC QP+VL+GRD VCPYCDGGFVQEL+EL GIAP HTF S SGEFHQMPD
Sbjct: 1    MSSGATHWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTFCSQSGEFHQMPD 60

Query: 506  LFDAIHAFMGHRGSDHRVGLID-AVDNFMRHRMAGRHPNFDXXXXXXXXXXXXXXEQGWG 682
            +FDAI AFMG RGSD R  L+D AVDNFMRHR AGR+ NFD              E+ WG
Sbjct: 61   IFDAIPAFMGQRGSDQRSRLMDDAVDNFMRHRTAGRNSNFDVRGRSGSRPVP---ERSWG 117

Query: 683  VYSSGPYLIFHNGQ--GFTFSNGSPRGGPRRVDFGDYFMGHGLEELIEQLTMNDQHGPPP 856
            V+SSGPYLIFH GQ  G TF+ GSPRGG R VDFGDYFMG GLEELIEQLTMND+ GPPP
Sbjct: 118  VFSSGPYLIFH-GQVPGSTFAAGSPRGGSRHVDFGDYFMGLGLEELIEQLTMNDRRGPPP 176

Query: 857  AARSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHN 1036
            AA SSIDAMPTIKITQAHLRLDSHCPVCKEKFELG+EAREMPCNHIYHSDCIVPWLVQHN
Sbjct: 177  AALSSIDAMPTIKITQAHLRLDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHN 236

Query: 1037 SCPVCRVELPPQGHVXXXXXXXXXXXXXXXXXXT---DSSRGSRENDHQNHGRRNPLSFL 1207
            SCPVCRVELPPQG                    +   DSSRG REN  QNHGRRNP SFL
Sbjct: 237  SCPVCRVELPPQGQASSRGTQNWGGRNDSNTSSSGSNDSSRG-RENSRQNHGRRNPSSFL 295

Query: 1208 WPFRSSSSNNNHYAETGGSSSSTPPDQNNGTRYSGWPFD 1324
            WPFRSS+SNNNH+++TGGSSSS  PDQNNGT YSGWPFD
Sbjct: 296  WPFRSSNSNNNHHSDTGGSSSSNTPDQNNGTSYSGWPFD 334


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