BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001540
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142959.1| PREDICTED: photosystem II core complex prote...    77   7e-12
gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]     76   2e-11
ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [S...    76   2e-11
ref|NP_001147739.1| photosystem II core complex proteins psbY [Z...    76   2e-11
gb|AFK46434.1| unknown [Lotus japonicus]                               74   6e-11

>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
           gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
           II core complex proteins psbY, chloroplastic-like
           [Cucumis sativus]
          Length = 253

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 41/60 (68%), Positives = 43/60 (71%)
 Frame = -1

Query: 659 FASLGSSDSAFATQQIAEIAEGSDNRGXXXXXXXXXXXAWVLFNILQPALNQINRMRSTR 480
           FA+LGSSD AFA QQIAEIA   DNRG           AWVLFNILQPALNQINRMRS +
Sbjct: 122 FATLGSSDPAFAAQQIAEIAADGDNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDK 181



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = -2

Query: 346 SDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSQ 236
           SD+RGQLLLFVVAPAI+WVLYNILQPALNQLNRMRS+
Sbjct: 217 SDSRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSE 253


>gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]
          Length = 196

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -2

Query: 349 GSDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSQ 236
           GSDNRGQLLLFVVAPAI WVLYNILQPALNQLNRMRSQ
Sbjct: 79  GSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQ 116



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
 Frame = -1

Query: 659 FASLGSSDSAFATQQIAEIA----EGSDNRGXXXXXXXXXXXAWVLFNILQPALNQINRM 492
           F++L SSD+A A Q++A++A     GSDNRG            WVL+NILQPALNQ+NRM
Sbjct: 54  FSALASSDAALAAQRVADVAAAADSGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRM 113

Query: 491 RS 486
           RS
Sbjct: 114 RS 115



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2

Query: 343 DNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRS 239
           DNRG LLL VV PAI WVL+NILQPALNQ+NRM+S
Sbjct: 161 DNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKS 195


>ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [Sorghum bicolor]
           gi|241941317|gb|EES14462.1| hypothetical protein
           SORBIDRAFT_07g002060 [Sorghum bicolor]
          Length = 203

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -2

Query: 349 GSDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSQ 236
           GSDNRGQLLLFVVAPAI WVLYNILQPALNQLNRMRSQ
Sbjct: 88  GSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQ 125



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -2

Query: 343 DNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRS 239
           D+RG LLL VVAPAI WVL+NILQPALNQLNRMRS
Sbjct: 168 DSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRS 202



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 32/58 (55%), Positives = 37/58 (63%)
 Frame = -1

Query: 659 FASLGSSDSAFATQQIAEIAEGSDNRGXXXXXXXXXXXAWVLFNILQPALNQINRMRS 486
           F++L SSD+A A    A  A GSDNRG            WVL+NILQPALNQ+NRMRS
Sbjct: 68  FSALASSDAALADVAAAADA-GSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 124


>ref|NP_001147739.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195613400|gb|ACG28530.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 196

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -2

Query: 349 GSDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSQ 236
           GSDNRGQLLLFVVAPAI WVLYNILQPALNQLNRMRSQ
Sbjct: 79  GSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQ 116



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
 Frame = -1

Query: 659 FASLGSSDSAFATQQIAEIAE----GSDNRGXXXXXXXXXXXAWVLFNILQPALNQINRM 492
           F++L SSD+A A Q++A++A     GSDNRG            WVL+NILQPALNQ+NRM
Sbjct: 54  FSALASSDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRM 113

Query: 491 RS 486
           RS
Sbjct: 114 RS 115



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2

Query: 343 DNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRS 239
           DNRG LLL VV PAI WVL+NILQPALNQ+NRM+S
Sbjct: 161 DNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKS 195


>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 40/60 (66%), Positives = 44/60 (73%)
 Frame = -1

Query: 659 FASLGSSDSAFATQQIAEIAEGSDNRGXXXXXXXXXXXAWVLFNILQPALNQINRMRSTR 480
           F+SL S D+AFA QQIAEIAEG DNRG            WVLFNILQPALNQINRMR+T+
Sbjct: 69  FSSLVSCDAAFAAQQIAEIAEG-DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRNTK 127



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = -2

Query: 349 GSDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSQ 236
           GSDNRGQLLLFVVAPAI WVL+NILQPALNQ+NRMRS+
Sbjct: 168 GSDNRGQLLLFVVAPAIGWVLFNILQPALNQINRMRSE 205



 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -2

Query: 343 DNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRS 239
           DNRG  LL  + PAIVWVL+NILQPALNQ+NRMR+
Sbjct: 91  DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRN 125