BLASTX nr result

ID: Glycyrrhiza23_contig00001525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001525
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005088863.1| Ycf1 (chloroplast) [Millettia pinnata] gi|35...   151   2e-34
ref|NP_084853.1| hypothetical protein LocoCp080 [Lotus japonicus...   145   1e-32
ref|YP_006460396.1| hypothetical chloroplast RF19 (chloroplast) ...   141   2e-31
ref|YP_003434397.1| hypothetical protein RF1 [Vigna radiata] gi|...   141   2e-31
gb|ABW22810.1| hypothetical chloroplast RF1 [Phaseolus vulgaris]      137   3e-30

>ref|YP_005088863.1| Ycf1 (chloroplast) [Millettia pinnata] gi|356474882|gb|AEQ36900.1|
            Ycf1 (chloroplast) [Millettia pinnata]
          Length = 1791

 Score =  151 bits (382), Expect = 2e-34
 Identities = 81/131 (61%), Positives = 93/131 (70%), Gaps = 7/131 (5%)
 Frame = -2

Query: 373  LNQLIIAKNIVRKPLFQIPELSKDFRDWKREMYIKYTFYGVPLSEKNRLVNWLTEGFQIG 194
            L  LII KNIVR   FQ PE S+D+RDW+REMYIK T+ GV LSEK     WLT+G QI 
Sbjct: 795  LPSLIITKNIVRMIFFQFPEWSEDYRDWQREMYIKCTYNGVQLSEKEFPKKWLTDGIQIK 854

Query: 193  ILFSFRLKAWHRSKAKVRSTE-------KKNVKKKSFCYLTICGTQVESPFADHIPNPFS 35
            ILF FRLK WHRS  K+RSTE       KKN+KKK+FC+LTI G +VE PF+    N FS
Sbjct: 855  ILFPFRLKPWHRS--KLRSTEKEKDRIKKKNLKKKNFCFLTIWGREVELPFSGSSKNRFS 912

Query: 34   FFDPIFKIVKK 2
            FFDPIFK +KK
Sbjct: 913  FFDPIFKELKK 923


>ref|NP_084853.1| hypothetical protein LocoCp080 [Lotus japonicus]
            gi|23822371|sp|Q9BBN6.1|YCF1_LOTJA RecName: Full=Putative
            membrane protein ycf1 gi|13359036|dbj|BAB33253.1|
            hypothetical protein [Lotus japonicus]
          Length = 1793

 Score =  145 bits (367), Expect = 1e-32
 Identities = 80/131 (61%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
 Frame = -2

Query: 373  LNQLIIAKNIVRKPLFQIPELSKDFRDWKREMYIKYTFYGVPLSEKNRLVNWLTEGFQIG 194
            L  LII KNIVR  LFQ PE S+DFRDW+REMYIK T+ GV LSE      WLT+G QI 
Sbjct: 786  LPSLIITKNIVRILLFQFPEWSEDFRDWQREMYIKCTYNGVQLSETEFPKKWLTDGIQIK 845

Query: 193  ILFSFRLKAWHRSKAKVRSTEK-------KNVKKKSFCYLTICGTQVESPFADHIPNPFS 35
            ILF FRLK WHRS  K+R TEK       K VKKK+FC+LTI G +VE PF+ +  N FS
Sbjct: 846  ILFPFRLKPWHRS--KLRFTEKKKDPLKNKKVKKKNFCFLTIFGMEVELPFSGYPRNRFS 903

Query: 34   FFDPIFKIVKK 2
            FFDPI K +KK
Sbjct: 904  FFDPILKELKK 914


>ref|YP_006460396.1| hypothetical chloroplast RF19 (chloroplast) [Vigna unguiculata]
            gi|387598520|gb|AFJ91912.1| hypothetical chloroplast RF19
            (chloroplast) [Vigna unguiculata]
          Length = 1724

 Score =  141 bits (356), Expect = 2e-31
 Identities = 69/124 (55%), Positives = 84/124 (67%)
 Frame = -2

Query: 373  LNQLIIAKNIVRKPLFQIPELSKDFRDWKREMYIKYTFYGVPLSEKNRLVNWLTEGFQIG 194
            L  LII KN +R   FQIPE S+D+ DWKREMYIK T+ GV LSE+     WLT+G QI 
Sbjct: 771  LPSLIIIKNTLRILFFQIPEWSEDYMDWKREMYIKCTYNGVQLSEREFPQKWLTDGIQIK 830

Query: 193  ILFSFRLKAWHRSKAKVRSTEKKNVKKKSFCYLTICGTQVESPFADHIPNPFSFFDPIFK 14
            ILF FRLK WH+SK +    +K + KKK+FC+LT+ G +VE PF+    N F FFDPI K
Sbjct: 831  ILFPFRLKPWHKSKIRCNEKKKNSKKKKNFCFLTVSGMEVELPFSSSTKNRFEFFDPILK 890

Query: 13   IVKK 2
              KK
Sbjct: 891  ETKK 894


>ref|YP_003434397.1| hypothetical protein RF1 [Vigna radiata] gi|259020066|gb|ACV90264.1|
            hypothetical protein RF1 [Vigna radiata]
          Length = 1724

 Score =  141 bits (356), Expect = 2e-31
 Identities = 69/124 (55%), Positives = 84/124 (67%)
 Frame = -2

Query: 373  LNQLIIAKNIVRKPLFQIPELSKDFRDWKREMYIKYTFYGVPLSEKNRLVNWLTEGFQIG 194
            L  LII KN +R   FQIPE S+D+ DWKREMYIK T+ GV LSE+     WLT+G QI 
Sbjct: 771  LPSLIIIKNTLRILFFQIPEWSEDYMDWKREMYIKCTYNGVQLSEREFPQKWLTDGIQIK 830

Query: 193  ILFSFRLKAWHRSKAKVRSTEKKNVKKKSFCYLTICGTQVESPFADHIPNPFSFFDPIFK 14
            ILF FRLK WH+SK +    +K + KKK+FC+LT+ G +VE PF+    N F FFDPI K
Sbjct: 831  ILFPFRLKPWHKSKIRCNEKKKNSKKKKNFCFLTVSGMEVELPFSSSTKNRFEFFDPILK 890

Query: 13   IVKK 2
              KK
Sbjct: 891  ETKK 894


>gb|ABW22810.1| hypothetical chloroplast RF1 [Phaseolus vulgaris]
          Length = 1759

 Score =  137 bits (346), Expect = 3e-30
 Identities = 67/124 (54%), Positives = 85/124 (68%)
 Frame = -2

Query: 373  LNQLIIAKNIVRKPLFQIPELSKDFRDWKREMYIKYTFYGVPLSEKNRLVNWLTEGFQIG 194
            L  LII KN++R   FQIPE S+D+RDWKRE YIK T+ GV LSE+     WLT+G QI 
Sbjct: 800  LPSLIIIKNMIRILFFQIPEWSEDYRDWKRERYIKCTYNGVQLSEREFPQKWLTDGIQIK 859

Query: 193  ILFSFRLKAWHRSKAKVRSTEKKNVKKKSFCYLTICGTQVESPFADHIPNPFSFFDPIFK 14
            I+F F LK WH+ K +    +K + KKK+FC+LT+ G +VE PF+    N FSFFDPI K
Sbjct: 860  IVFPFHLKPWHKYKIRCNKKKKDSKKKKNFCFLTVWGMEVELPFSSSPKNLFSFFDPILK 919

Query: 13   IVKK 2
             +KK
Sbjct: 920  ELKK 923


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