BLASTX nr result

ID: Glycyrrhiza23_contig00001465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001465
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35896.1| unknown [Lotus japonicus]                              237   6e-60
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...   232   1e-58
ref|XP_003521836.1| PREDICTED: RING-H2 finger protein ATL3-like ...   230   6e-58
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ...   221   4e-55
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   215   2e-53

>gb|AFK35896.1| unknown [Lotus japonicus]
          Length = 286

 Score =  237 bits (604), Expect = 6e-60
 Identities = 144/294 (48%), Positives = 166/294 (56%), Gaps = 12/294 (4%)
 Frame = -3

Query: 1097 NKLGESPAVDLVGKTXXXXXXXXXXXXXXXLGFHLYAKGFWWRVPQSPXXXXXXXXXASG 918
            +KLGESPAV+  GK                L  HLY KGFWWR                 
Sbjct: 13   DKLGESPAVEFTGKIMMGAIIVLFMVVVCFLFKHLYDKGFWWR------PGGDITTAPQS 66

Query: 917  QDGALRSGLDPSVLRSLPVMVFQPQDFKDGLECAVCLSELAQGEKARLLPKCNHGFHLDC 738
            +    R+GLDPSVLRSLPV+VFQ QDFKDGLECAVCLSEL +GEKARLLPKCNHGFH+DC
Sbjct: 67   EPRRPRTGLDPSVLRSLPVVVFQSQDFKDGLECAVCLSELDEGEKARLLPKCNHGFHVDC 126

Query: 737  IDMWFQSHATCPLCRTSVASSTTANDDPTEDNESFGTENSDGVSGLESPTFPTNVLIWGN 558
            IDMWFQSH+TCPLCRTSVAS  + N+  +  ++S             S TFPTNVLIWGN
Sbjct: 127  IDMWFQSHSTCPLCRTSVASHDSDNNLQSSSSDS-------------SSTFPTNVLIWGN 173

Query: 557  QTQISST-------GACASLXXXXXXXXXXXXXXXXSCGANNNRRHGMLIIDIPGEITPS 399
             TQISST           S                 SC  +N   +G L+IDIP +IT S
Sbjct: 174  DTQISSTTTPTSSLEGSTSQPPQAQLPCSSSSSSHTSCNCSNG--NGELVIDIPSQITSS 231

Query: 398  SLSPS-----PDEMKSPVTGXXXXXXXXXXXXXXLNPWSPTSTSTDDVEQAKGK 252
            SLSPS      DE+KSP+ G              LNP +P S S+ DVEQA G+
Sbjct: 232  SLSPSASTFAEDELKSPIIGRLRSLKRLLSWDTRLNPLTPRSASS-DVEQAGGR 284


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score =  232 bits (592), Expect = 1e-58
 Identities = 140/312 (44%), Positives = 171/312 (54%), Gaps = 31/312 (9%)
 Frame = -3

Query: 1100 DNKLGESPAVDLVGKTXXXXXXXXXXXXXXXLGFHLYAKGFWWRV-------PQSPXXXX 942
            DN  GES  +++ GK                L  HLYAK FWW +       P+      
Sbjct: 5    DNAWGESDTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENATPQPRHRRRRR 64

Query: 941  XXXXXASGQDGAL----RSGLDPSVLRSLPVMVFQPQDFKDGLECAVCLSELAQGEKARL 774
                 A GQD  +    + GLDPSVL+SLPV+VFQP+DFK+GLECAVCLSE+ QGEK RL
Sbjct: 65   RRFVFAPGQDSVIYETHQVGLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRL 124

Query: 773  LPKCNHGFHLDCIDMWFQSHATCPLCRTSVASSTTANDDP-----TEDNESFGTENSDGV 609
            LPKCNHGFH+DCIDMWF SH+TCPLCR  VA  ++  ++      ++ + S   ENS GV
Sbjct: 125  LPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFESSKCEESNVSGNSDSSSSSYEENSGGV 184

Query: 608  SGLESPTFPTNVLIWGNQTQISSTGAC---------ASLXXXXXXXXXXXXXXXXSCGAN 456
            SGLE   FPTNVL+WGNQTQ+SS G                              S  +N
Sbjct: 185  SGLEPSNFPTNVLVWGNQTQVSSIGVSLEEKEEEEEEGTSQSQQPPCSTPPTASSSASSN 244

Query: 455  -NNRRHGMLIIDIPGEITPSSLSPS-----PDEMKSPVTGXXXXXXXXXXXXXXLNPWSP 294
             N R HGML+IDIP E T SSLSPS      +E+KSP+                L+P SP
Sbjct: 245  VNGRCHGMLVIDIPSECTSSSLSPSGSRCAEEEVKSPMAATLRSFKRLLSRDKKLSPCSP 304

Query: 293  TSTSTDDVEQAK 258
            +S    DVEQA+
Sbjct: 305  SSV---DVEQAQ 313


>ref|XP_003521836.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 260

 Score =  230 bits (587), Expect = 6e-58
 Identities = 137/283 (48%), Positives = 164/283 (57%), Gaps = 4/283 (1%)
 Frame = -3

Query: 1100 DNKLGESPAVDLVGKTXXXXXXXXXXXXXXXLGFHLYAKGFWWR--VPQSPXXXXXXXXX 927
            ++ LGESPAV+L GK                L  HL+A+ FWWR   PQS          
Sbjct: 8    NDHLGESPAVELTGKIMIVVIIIMFFVIVIALCLHLFARNFWWRSPAPQSRSHRRRRFVF 67

Query: 926  ASGQDGALRSGLDPSVLRSLPVMVFQ--PQDFKDGLECAVCLSELAQGEKARLLPKCNHG 753
            +SG DG   SGLDP+VL SLPV+VF+   Q+FKDGLECAVCLSE+ +GEKARLLPKCNHG
Sbjct: 68   SSGPDGG--SGLDPAVLSSLPVLVFEGHAQEFKDGLECAVCLSEVVEGEKARLLPKCNHG 125

Query: 752  FHLDCIDMWFQSHATCPLCRTSVASSTTANDDPTEDNESFGTENSDGVSGLESPTFPTNV 573
            FH+ CIDMWFQSH+TCPLCR  VASS  ++                     ESPTFPTNV
Sbjct: 126  FHVACIDMWFQSHSTCPLCRNPVASSEESS---------------------ESPTFPTNV 164

Query: 572  LIWGNQTQISSTGACASLXXXXXXXXXXXXXXXXSCGANNNRRHGMLIIDIPGEITPSSL 393
            L+WGNQ QISSTG   +                 S  A+    HGML+IDIP E+T +SL
Sbjct: 165  LVWGNQAQISSTGGGGA---------SLEEGSSSSSSASTCDDHGMLVIDIPSEMTSTSL 215

Query: 392  SPSPDEMKSPVTGXXXXXXXXXXXXXXLNPWSPTSTSTDDVEQ 264
            SP  D++KSP+TG               NP SP  TS+ DV+Q
Sbjct: 216  SPE-DDVKSPMTGRLRSLKRLLSRDKRFNPSSP--TSSPDVQQ 255


>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 319

 Score =  221 bits (562), Expect = 4e-55
 Identities = 135/317 (42%), Positives = 168/317 (52%), Gaps = 36/317 (11%)
 Frame = -3

Query: 1100 DNKLGESPAVDLVGKTXXXXXXXXXXXXXXXLGFHLYAKGFWWRVPQSPXXXXXXXXXAS 921
            D+  GES  +++ GK                L  HLYAK FWW + ++            
Sbjct: 5    DDTWGESGTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENAAPQPRRRRRRR 64

Query: 920  ------GQDGAL----RSGLDPSVLRSLPVMVFQPQDFKDGLECAVCLSELAQGEKARLL 771
                  GQD  +    + GLDPSVL+SL V+VFQP++FK+GLECAVCLSE+ +GEK RLL
Sbjct: 65   RFVFAPGQDPVIYETHQVGLDPSVLKSLAVLVFQPEEFKEGLECAVCLSEIVEGEKLRLL 124

Query: 770  PKCNHGFHLDCIDMWFQSHATCPLCRTSVASSTTANDD------PTEDNESFGTENSDGV 609
            PKCNHGFH+DCIDMWF SH+TCPLCR  V   ++  ++       +ED+ S   ENS G 
Sbjct: 125  PKCNHGFHVDCIDMWFHSHSTCPLCRNPVTFESSKIEENNNVLGSSEDSSSSHEENSGGG 184

Query: 608  SGLESPTFPTNVLIWGNQTQISSTG-ACASLXXXXXXXXXXXXXXXXSC----------- 465
            SGLE   FPTNVL+WGNQTQ+SS G +                     C           
Sbjct: 185  SGLEPSNFPTNVLVWGNQTQVSSFGVSLEDSLEEKQEQGTSQCQQPPPCSPSPTPSSSSS 244

Query: 464  ---GANNNRRHGMLIIDIPGEITPSSLSPS-----PDEMKSPVTGXXXXXXXXXXXXXXL 309
               G  N R HGML+IDIP E T SSLSPS      DE+KSP+                L
Sbjct: 245  SARGNVNGRCHGMLVIDIPNECTSSSLSPSGSRCAEDEVKSPMAVTLRSFKRLLSREKKL 304

Query: 308  NPWSPTSTSTDDVEQAK 258
            +P SP+S    DVEQA+
Sbjct: 305  SPCSPSSV---DVEQAQ 318


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  215 bits (547), Expect = 2e-53
 Identities = 134/307 (43%), Positives = 161/307 (52%), Gaps = 21/307 (6%)
 Frame = -3

Query: 1097 NKLGESPAVDLVGKTXXXXXXXXXXXXXXXLGFHLYAKGFWWRVPQ------SPXXXXXX 936
            + L +S AV+L GK                L  HLYAK FWWR                 
Sbjct: 8    SSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRR 67

Query: 935  XXXASGQDGAL---RSGLDPSVLRSLPVMVFQPQDFKDGLECAVCLSELAQGEKARLLPK 765
               A GQD AL   R GLDPS+L S+PV+VF+P++FKDGLECAVCLSEL  GEKARLLPK
Sbjct: 68   FVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPK 127

Query: 764  CNHGFHLDCIDMWFQSHATCPLCRTSVASSTTANDDPTEDNESFGTENSD-----GVSGL 600
            CNHGFH++CIDMWFQSH+TCPLCR  VA   T   DPT        + SD     G   L
Sbjct: 128  CNHGFHVECIDMWFQSHSTCPLCRNLVA---TVLSDPTTPQSPESIQLSDESSAAGDYSL 184

Query: 599  ESPTFPTNVLIWGNQTQISSTGACASLXXXXXXXXXXXXXXXXSCGANNNRRHGMLIIDI 420
            ESP +PTN+L WGNQT+++S G C                    C +  N   GML+IDI
Sbjct: 185  ESPNYPTNILFWGNQTRVTSAGLCLE---------EGAASSQPPCASPGNGPDGMLVIDI 235

Query: 419  P-------GEITPSSLSPSPDEMKSPVTGXXXXXXXXXXXXXXLNPWSPTSTSTDDVEQA 261
            P         ++PS+   S +E+KSP+T               + P SP S    DVEQ 
Sbjct: 236  PRQTAENFSSLSPSTGGTSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSV---DVEQ- 291

Query: 260  KGKGGQN 240
             G  GQN
Sbjct: 292  -GGRGQN 297


Top