BLASTX nr result

ID: Glycyrrhiza23_contig00001458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001458
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596213.1| Tobamovirus multiplication 2B [Medicago trun...   199   6e-49
gb|AFK40660.1| unknown [Medicago truncatula]                          194   2e-47
ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819...   192   7e-47
ref|XP_002326707.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
emb|CBI33952.3| unnamed protein product [Vitis vinifera]              150   3e-34

>ref|XP_003596213.1| Tobamovirus multiplication 2B [Medicago truncatula]
           gi|355485261|gb|AES66464.1| Tobamovirus multiplication
           2B [Medicago truncatula]
          Length = 150

 Score =  199 bits (507), Expect = 6e-49
 Identities = 106/139 (76%), Positives = 115/139 (82%)
 Frame = +3

Query: 18  NGKRSLWRTMSXXXXXXXXXXXXXKTMVAEHISQTVQSTSNLLHLMQHSSPAQAQLIKLP 197
           N +R LWR MS             K +VAE ISQTVQSTSNLLHLMQHSSPAQA+L+KLP
Sbjct: 13  NRRRPLWRPMSTQNAATGGDNSA-KAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLP 71

Query: 198 KNLLAKVSTIKNTEQVLQQLPGVISSLDAHMENGLQNVPHLKTAVQLLANMESNQLSPLS 377
           KNLLAKVST+KNT+QVL+QLP VISSLDAHMENGLQNVP LKT VQLLANMES+QLS LS
Sbjct: 72  KNLLAKVSTVKNTQQVLEQLPRVISSLDAHMENGLQNVPQLKTVVQLLANMESSQLSSLS 131

Query: 378 QTHALEKELEPGNQSQGTD 434
           +TH LEKE EPGNQSQGTD
Sbjct: 132 RTHVLEKEHEPGNQSQGTD 150


>gb|AFK40660.1| unknown [Medicago truncatula]
          Length = 129

 Score =  194 bits (493), Expect = 2e-47
 Identities = 99/115 (86%), Positives = 107/115 (93%)
 Frame = +3

Query: 90  KTMVAEHISQTVQSTSNLLHLMQHSSPAQAQLIKLPKNLLAKVSTIKNTEQVLQQLPGVI 269
           K +VAE ISQTVQSTSNLLHLMQHSSPAQA+L+KLPKNLLAKVST+KNT+QVL+QLP VI
Sbjct: 15  KAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVLEQLPRVI 74

Query: 270 SSLDAHMENGLQNVPHLKTAVQLLANMESNQLSPLSQTHALEKELEPGNQSQGTD 434
           SSLDAHMENGLQNVP LKT VQLLANMES+QLS LS+TH LEKE EPGNQSQGTD
Sbjct: 75  SSLDAHMENGLQNVPQLKTVVQLLANMESSQLSSLSRTHVLEKEHEPGNQSQGTD 129


>ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819701 [Glycine max]
          Length = 130

 Score =  192 bits (489), Expect = 7e-47
 Identities = 98/114 (85%), Positives = 106/114 (92%)
 Frame = +3

Query: 90  KTMVAEHISQTVQSTSNLLHLMQHSSPAQAQLIKLPKNLLAKVSTIKNTEQVLQQLPGVI 269
           K  VAE ISQ VQSTSNLLHLM+HSSPAQAQL+KLPKNLLAKVSTIKNTEQVL+QLPGVI
Sbjct: 16  KATVAEQISQAVQSTSNLLHLMRHSSPAQAQLVKLPKNLLAKVSTIKNTEQVLEQLPGVI 75

Query: 270 SSLDAHMENGLQNVPHLKTAVQLLANMESNQLSPLSQTHALEKELEPGNQSQGT 431
           SSLDAHMENGLQNVPHLKT VQ+L+NMES+QLS LS+ H L+KELEPGNQSQGT
Sbjct: 76  SSLDAHMENGLQNVPHLKTVVQVLSNMESSQLSLLSRPHPLQKELEPGNQSQGT 129


>ref|XP_002326707.1| predicted protein [Populus trichocarpa] gi|222834029|gb|EEE72506.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  154 bits (390), Expect = 2e-35
 Identities = 79/110 (71%), Positives = 95/110 (86%)
 Frame = +3

Query: 90  KTMVAEHISQTVQSTSNLLHLMQHSSPAQAQLIKLPKNLLAKVSTIKNTEQVLQQLPGVI 269
           K++VA+ ISQ VQSTSNLLHLMQ SSP+QA+L+KLPKNLLAK STIKNT QVL Q+P VI
Sbjct: 23  KSVVADQISQAVQSTSNLLHLMQQSSPSQAKLMKLPKNLLAKASTIKNTGQVLDQMPKVI 82

Query: 270 SSLDAHMENGLQNVPHLKTAVQLLANMESNQLSPLSQTHALEKELEPGNQ 419
           SSLDAHM++GLQ+VPHL+TA+QLLANMES QL+ LSQ    ++E EP +Q
Sbjct: 83  SSLDAHMDSGLQSVPHLRTAIQLLANMESCQLNTLSQAQFSQQESEPSSQ 132


>emb|CBI33952.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score =  150 bits (380), Expect = 3e-34
 Identities = 77/107 (71%), Positives = 92/107 (85%)
 Frame = +3

Query: 99  VAEHISQTVQSTSNLLHLMQHSSPAQAQLIKLPKNLLAKVSTIKNTEQVLQQLPGVISSL 278
           +A+ ISQ+VQSTSNLLHLMQ SSP+ AQL KLPKNLLAK STIKNT Q+L+Q+P VISSL
Sbjct: 1   MADQISQSVQSTSNLLHLMQQSSPSHAQLTKLPKNLLAKTSTIKNTGQLLEQMPRVISSL 60

Query: 279 DAHMENGLQNVPHLKTAVQLLANMESNQLSPLSQTHALEKELEPGNQ 419
           DAH+E+GLQ+VPHLKT +QLLANMES QL+P+S+ H  EKE E  +Q
Sbjct: 61  DAHIESGLQSVPHLKTVIQLLANMESCQLNPMSEAHLPEKEPELTSQ 107


Top