BLASTX nr result

ID: Glycyrrhiza23_contig00001439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001439
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation...   435   e-120
ref|NP_001239738.1| uncharacterized protein LOC100811797 [Glycin...   434   e-119
ref|XP_003600862.1| Eukaryotic translation initiation factor 3 s...   434   e-119
gb|AFK41609.1| unknown [Medicago truncatula]                          432   e-119
ref|NP_001239774.1| uncharacterized protein LOC100786716 [Glycin...   430   e-118

>ref|XP_003538452.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F-like
            [Glycine max]
          Length = 288

 Score =  435 bits (1119), Expect = e-120
 Identities = 222/250 (88%), Positives = 231/250 (92%)
 Frame = -2

Query: 1074 MAASNRTVLQFHXXXXXXXXXSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT 895
            MAAS+RTVLQF          SAKVHPLVIFNICDCYVRRPDQA+RVIGTLLGSVLPDGT
Sbjct: 1    MAASDRTVLQFSSSSSSSQSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGT 60

Query: 894  VDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 715
            VDIRNSYAVPHNES++QVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE
Sbjct: 61   VDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 120

Query: 714  FYSREVPNNAIHLTVDTGFVNGEGTIKAYVSNNLSLGDKQIAAQFQEIPLDLRMVEAERI 535
            FYSREVP N IHLTVDTGF NG GTIKAYVSNNLSLG++QIAAQFQEIPLDLRMVEAERI
Sbjct: 121  FYSREVP-NPIHLTVDTGFTNGAGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMVEAERI 179

Query: 534  GYDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHKYVDDVVEGRVAPDNKIGRFISDAV 355
            G+D LKATAVDKIPSDLEGMEASMQHLL LIDDI+KYV+DVVEG VAPDNKIGRFISDAV
Sbjct: 180  GFDMLKATAVDKIPSDLEGMEASMQHLLVLIDDIYKYVNDVVEGLVAPDNKIGRFISDAV 239

Query: 354  GSLPKLPSSV 325
            GSLPKL  SV
Sbjct: 240  GSLPKLSPSV 249


>ref|NP_001239738.1| uncharacterized protein LOC100811797 [Glycine max]
            gi|255638221|gb|ACU19424.1| unknown [Glycine max]
          Length = 289

 Score =  434 bits (1115), Expect = e-119
 Identities = 222/251 (88%), Positives = 231/251 (92%), Gaps = 1/251 (0%)
 Frame = -2

Query: 1074 MAASNRTVLQFHXXXXXXXXXS-AKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDG 898
            MAAS+RTVLQF            AKVHPLVIFNICDCYVRRPDQA+RVIGTLLGSVLPDG
Sbjct: 1    MAASDRTVLQFSSSSSSSSQILSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDG 60

Query: 897  TVDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIH 718
            TVDIRNSYAVPHNES++QVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIH
Sbjct: 61   TVDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIH 120

Query: 717  EFYSREVPNNAIHLTVDTGFVNGEGTIKAYVSNNLSLGDKQIAAQFQEIPLDLRMVEAER 538
            EFYSREVP N IHLTVDTGF NG GTIKAYVSNNLSLG++QIAAQFQEIPLDLRMVEAER
Sbjct: 121  EFYSREVP-NPIHLTVDTGFTNGAGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMVEAER 179

Query: 537  IGYDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHKYVDDVVEGRVAPDNKIGRFISDA 358
            IG+D LKATAVDKIPSDLEGMEASMQHLL LIDDI+KYVDDVVEGRVAPDNKIGRFIS+A
Sbjct: 180  IGFDMLKATAVDKIPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVAPDNKIGRFISEA 239

Query: 357  VGSLPKLPSSV 325
            VGSLPKL  SV
Sbjct: 240  VGSLPKLSPSV 250


>ref|XP_003600862.1| Eukaryotic translation initiation factor 3 subunit F [Medicago
            truncatula] gi|217073538|gb|ACJ85129.1| unknown [Medicago
            truncatula] gi|355489910|gb|AES71113.1| Eukaryotic
            translation initiation factor 3 subunit F [Medicago
            truncatula]
          Length = 288

 Score =  434 bits (1115), Expect = e-119
 Identities = 220/249 (88%), Positives = 230/249 (92%)
 Frame = -2

Query: 1074 MAASNRTVLQFHXXXXXXXXXSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT 895
            MA++NRTVLQF          SAKVHPLV+FNICDCYVRRPDQAERVIGTLLGSVLPDGT
Sbjct: 1    MASTNRTVLQFSSSSSSSQSLSAKVHPLVVFNICDCYVRRPDQAERVIGTLLGSVLPDGT 60

Query: 894  VDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 715
            VDIRNSYAVPHNESVDQVALDIEYHHNML+SHQKVN KEIIVGWYSTGLGVTGGSALIHE
Sbjct: 61   VDIRNSYAVPHNESVDQVALDIEYHHNMLLSHQKVNQKEIIVGWYSTGLGVTGGSALIHE 120

Query: 714  FYSREVPNNAIHLTVDTGFVNGEGTIKAYVSNNLSLGDKQIAAQFQEIPLDLRMVEAERI 535
            FYSREVP N IHLTVDTGF  G GTIKAYVSNNLSLGD+QIAAQFQEIPLDLRMVEAERI
Sbjct: 121  FYSREVP-NPIHLTVDTGFTAGGGTIKAYVSNNLSLGDRQIAAQFQEIPLDLRMVEAERI 179

Query: 534  GYDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHKYVDDVVEGRVAPDNKIGRFISDAV 355
            G+D LKAT VDKIPSDLEGMEASM+HLLALI+DI+KYVDDVVEGRVAPDNKIG+FISDAV
Sbjct: 180  GFDILKATTVDKIPSDLEGMEASMEHLLALINDIYKYVDDVVEGRVAPDNKIGKFISDAV 239

Query: 354  GSLPKLPSS 328
            GSLPKLP S
Sbjct: 240  GSLPKLPPS 248


>gb|AFK41609.1| unknown [Medicago truncatula]
          Length = 288

 Score =  432 bits (1112), Expect = e-119
 Identities = 219/249 (87%), Positives = 230/249 (92%)
 Frame = -2

Query: 1074 MAASNRTVLQFHXXXXXXXXXSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT 895
            MA++NRTVLQF          SA+VHPLV+FNICDCYVRRPDQAERVIGTLLGSVLPDGT
Sbjct: 1    MASTNRTVLQFSSSSSSSQSLSARVHPLVVFNICDCYVRRPDQAERVIGTLLGSVLPDGT 60

Query: 894  VDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHE 715
            VDIRNSYAVPHNESVDQVALDIEYHHNML+SHQKVN KEIIVGWYSTGLGVTGGSALIHE
Sbjct: 61   VDIRNSYAVPHNESVDQVALDIEYHHNMLLSHQKVNQKEIIVGWYSTGLGVTGGSALIHE 120

Query: 714  FYSREVPNNAIHLTVDTGFVNGEGTIKAYVSNNLSLGDKQIAAQFQEIPLDLRMVEAERI 535
            FYSREVP N IHLTVDTGF  G GTIKAYVSNNLSLGD+QIAAQFQEIPLDLRMVEAERI
Sbjct: 121  FYSREVP-NPIHLTVDTGFTAGGGTIKAYVSNNLSLGDRQIAAQFQEIPLDLRMVEAERI 179

Query: 534  GYDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHKYVDDVVEGRVAPDNKIGRFISDAV 355
            G+D LKAT VDKIPSDLEGMEASM+HLLALI+DI+KYVDDVVEGRVAPDNKIG+FISDAV
Sbjct: 180  GFDILKATTVDKIPSDLEGMEASMEHLLALINDIYKYVDDVVEGRVAPDNKIGKFISDAV 239

Query: 354  GSLPKLPSS 328
            GSLPKLP S
Sbjct: 240  GSLPKLPPS 248


>ref|NP_001239774.1| uncharacterized protein LOC100786716 [Glycine max]
            gi|255644643|gb|ACU22824.1| unknown [Glycine max]
            gi|255644655|gb|ACU22830.1| unknown [Glycine max]
          Length = 289

 Score =  430 bits (1105), Expect = e-118
 Identities = 216/254 (85%), Positives = 232/254 (91%)
 Frame = -2

Query: 1089 IQAPNMAASNRTVLQFHXXXXXXXXXSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSV 910
            ++AP+MAA+ RTVLQF           AKVHPLV+FNICDCYVRR DQAERVIGTLLGS+
Sbjct: 1    MEAPSMAATERTVLQFSSSQSLS----AKVHPLVVFNICDCYVRRLDQAERVIGTLLGSI 56

Query: 909  LPDGTVDIRNSYAVPHNESVDQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGS 730
            LPDGTVD+RNSYAVPH+ESVDQVALDIEYHH+ML+SHQKVNPKE+IVGWYSTGLGVTGGS
Sbjct: 57   LPDGTVDVRNSYAVPHSESVDQVALDIEYHHSMLLSHQKVNPKEVIVGWYSTGLGVTGGS 116

Query: 729  ALIHEFYSREVPNNAIHLTVDTGFVNGEGTIKAYVSNNLSLGDKQIAAQFQEIPLDLRMV 550
            ALIHEFYSREVPN  IHLT+DTGF  G GTIKAYVS+NLSLGD QIAAQFQEIPLDLRMV
Sbjct: 117  ALIHEFYSREVPN-PIHLTIDTGFTKGAGTIKAYVSHNLSLGDHQIAAQFQEIPLDLRMV 175

Query: 549  EAERIGYDTLKATAVDKIPSDLEGMEASMQHLLALIDDIHKYVDDVVEGRVAPDNKIGRF 370
            EAERIG+DTLKATAVDKIPSDLEGMEA M HLLALIDDIHKYVDDVVEGR+ PDNKIGRF
Sbjct: 176  EAERIGFDTLKATAVDKIPSDLEGMEALMGHLLALIDDIHKYVDDVVEGRIDPDNKIGRF 235

Query: 369  ISDAVGSLPKLPSS 328
            ISDAVGS+PKLPSS
Sbjct: 236  ISDAVGSIPKLPSS 249


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