BLASTX nr result

ID: Glycyrrhiza23_contig00001430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001430
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   621   e-175
ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...   611   e-172
ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   598   e-168
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   519   e-144
ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144

>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            17-like [Glycine max]
          Length = 596

 Score =  621 bits (1602), Expect = e-175
 Identities = 324/397 (81%), Positives = 343/397 (86%)
 Frame = +2

Query: 2    LGSRKTGYDDQENAVPRPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPM 181
            LGSRK G+ DQEN V   SKIQRQNLLLSATLNEKVNHLAK+SLDNPVMIGLDG+K+EP+
Sbjct: 204  LGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMSLDNPVMIGLDGKKMEPI 263

Query: 182  STITRLXXXXXXXXXXXXXXKHSSKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKH 361
            STI RL              K+SSK P VG Y VP QL QRY+K PCGSRLPVLLSILKH
Sbjct: 264  STIKRLDSSESDEDSED---KYSSKVPTVGDYKVPIQLIQRYMKVPCGSRLPVLLSILKH 320

Query: 362  LFEREPSQKVVVFFSTCDAVDFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQ 541
            LFEREPSQKVV+FFSTCDAVDFHYSLLSEF FS+YPQTE GVRQVFLGCKT RLHGNM+Q
Sbjct: 321  LFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYPQTE-GVRQVFLGCKTFRLHGNMQQ 379

Query: 542  EDRTTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE 721
            EDR TSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE
Sbjct: 380  EDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE 439

Query: 722  RGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKNHIKKSVFIDSHPWVL 901
            RGESLLFLQP EIDYLQDLEKHGVSLTEYP+LKVLDSFPL  QKNH KKSVF++SHPWVL
Sbjct: 440  RGESLLFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDSFPL--QKNHTKKSVFLESHPWVL 497

Query: 902  SLQKALESFITSKPKMNELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFALKQ 1081
             LQKALE+FI SKP+M+E AR+AFCSWVRAYTAHRGELKRI MIKKLHLGHVAKSFALKQ
Sbjct: 498  CLQKALEAFIMSKPEMDEHARKAFCSWVRAYTAHRGELKRIXMIKKLHLGHVAKSFALKQ 557

Query: 1082 QPSLVGKSFQKQTXXXXXXXXXXXXNGLSKKRKVASV 1192
            QPSLVG+SFQKQ             NG +KKRKVASV
Sbjct: 558  QPSLVGQSFQKQN---KKRKRFEKKNGFTKKRKVASV 591


>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 613

 Score =  611 bits (1575), Expect = e-172
 Identities = 312/395 (78%), Positives = 335/395 (84%)
 Frame = +2

Query: 2    LGSRKTGYDDQENAVPRPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPM 181
            LGS KTG+DDQE+ VPRPSK QRQNLLLSATLNEKVNHLAKISL++PVMIG+D + +EP 
Sbjct: 222  LGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPT 281

Query: 182  STITRLXXXXXXXXXXXXXXKHSSKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKH 361
            S I                  HSSK PA+GAY VP QL QRY+K PCGSRL +LLSILKH
Sbjct: 282  SRIR----FDNSDCDEDNEDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKH 337

Query: 362  LFEREPSQKVVVFFSTCDAVDFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQ 541
            LFEREPSQKVV+FFSTCDAVDFHYSL++EF FS+YPQTE+G R +FLGCKTLRLHGNMEQ
Sbjct: 338  LFEREPSQKVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQ 397

Query: 542  EDRTTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE 721
            EDRTTSFQAFKTEKSALLLSTDVSARGLDFP VRCIIQYDSPGEATEYVHRVGRTARLGE
Sbjct: 398  EDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGE 457

Query: 722  RGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKNHIKKSVFIDSHPWVL 901
            RGESLLFLQP+EIDYLQDLEKHGVSL EYPLLKVLDSFPL   KN+IKKSVFID HPW++
Sbjct: 458  RGESLLFLQPSEIDYLQDLEKHGVSLVEYPLLKVLDSFPLSAHKNNIKKSVFIDMHPWIM 517

Query: 902  SLQKALESFITSKPKMNELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFALKQ 1081
             LQKALES I+SKPKM ELA+RAFCSWVRAYTAHRGELKRIFM+KKLHLGHVAKSF LKQ
Sbjct: 518  CLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFGLKQ 577

Query: 1082 QPSLVGKSFQKQTXXXXXXXXXXXXNGLSKKRKVA 1186
             PSLVGKSFQ QT            NG S KRKVA
Sbjct: 578  IPSLVGKSFQNQT---KKRKRFEKKNGPSNKRKVA 609


>ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            17-like [Glycine max]
          Length = 591

 Score =  598 bits (1542), Expect = e-168
 Identities = 311/397 (78%), Positives = 337/397 (84%)
 Frame = +2

Query: 2    LGSRKTGYDDQENAVPRPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPM 181
            LGSRKTG+DD++N VP  SK+QRQNLLLS TLNE+VNHLAK+SLDNPVMIGLDG+K    
Sbjct: 204  LGSRKTGHDDKKNTVPTHSKMQRQNLLLSTTLNERVNHLAKMSLDNPVMIGLDGKKNGTN 263

Query: 182  STITRLXXXXXXXXXXXXXXKHSSKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKH 361
              I RL              K+ SK P VG Y VP QL QRY+K PCGSRLPVLLSILKH
Sbjct: 264  FNIKRLDPSESDEDSED---KYYSKVPTVGDYKVPLQLIQRYMKVPCGSRLPVLLSILKH 320

Query: 362  LFEREPSQKVVVFFSTCDAVDFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQ 541
            LFEREPSQKVV+FFSTCDAVDFHYSLLSEF FS+Y QTE GV+QVFLGCKT RLHGNM+Q
Sbjct: 321  LFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYSQTE-GVQQVFLGCKTFRLHGNMQQ 379

Query: 542  EDRTTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE 721
            EDR TSFQAFKTEKSALLLSTDVSARGLDFPKVR IIQYDSPGEATEYVHRVGRTARLGE
Sbjct: 380  EDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRFIIQYDSPGEATEYVHRVGRTARLGE 439

Query: 722  RGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKNHIKKSVFIDSHPWVL 901
            RGESL+FLQP EIDYLQDLEKHGVSLTEYP+LKVLD+FPL  QKNH KKSVF++SHPWVL
Sbjct: 440  RGESLVFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDNFPL--QKNHTKKSVFLESHPWVL 497

Query: 902  SLQKALESFITSKPKMNELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFALKQ 1081
             LQKALE+FI SKP+M+EL+R+AFCSWVRAYTAHRGELKR+FMIKKLHLGHVAKSFALKQ
Sbjct: 498  CLQKALEAFIMSKPEMDELSRKAFCSWVRAYTAHRGELKRVFMIKKLHLGHVAKSFALKQ 557

Query: 1082 QPSLVGKSFQKQTXXXXXXXXXXXXNGLSKKRKVASV 1192
             PSLVG+SFQKQ             NGLSKKRKVA +
Sbjct: 558  PPSLVGQSFQKQ---IEKRKIFEKKNGLSKKRKVAGL 591


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
            vinifera]
          Length = 600

 Score =  519 bits (1336), Expect = e-144
 Identities = 275/397 (69%), Positives = 313/397 (78%), Gaps = 2/397 (0%)
 Frame = +2

Query: 2    LGSRKTGYDDQENAVPRPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPM 181
            LGSR  G   +E+AV   S+ QRQNLLLSATLNEKVNHLA+ISL+NPV IGLDG+K++P 
Sbjct: 209  LGSRTNGPTIREDAVT--SEFQRQNLLLSATLNEKVNHLAQISLENPVTIGLDGKKMQPK 266

Query: 182  STITRLXXXXXXXXXXXXXXKHSSKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKH 361
              +                  H   +P+ G Y +P+QL QRY+K PCGSRL VLLSILKH
Sbjct: 267  PPLEHFGSVEFDVDEDSEKL-HKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLSILKH 325

Query: 362  LFEREPSQKVVVFFSTCDAVDFHYSLLSEFHFSA--YPQTEDGVRQVFLGCKTLRLHGNM 535
            LFERE SQK+VVFFSTCDAVDFHYSL S F + A  +P+TED  RQ+FL  KT +LHGNM
Sbjct: 326  LFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETED--RQMFLRFKTFQLHGNM 383

Query: 536  EQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARL 715
            + EDR T+FQ FK EKSALLLSTDV+ARGLDFPKVRCIIQYDSPGEA+EYVHRVGRTARL
Sbjct: 384  KHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRTARL 443

Query: 716  GERGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKNHIKKSVFIDSHPW 895
            GERG+SLLFLQP E+DYLQDLEKHGVSLTEY LLKVLDSFPL GQK+HIKK + ++ HPW
Sbjct: 444  GERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQKHHIKKFISLEMHPW 503

Query: 896  VLSLQKALESFITSKPKMNELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFAL 1075
             L LQKALESFI ++PKM +LA+ AFCSWVRAYTAHRGELKRIF +KKLHLGHVAKSFAL
Sbjct: 504  SLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQVKKLHLGHVAKSFAL 563

Query: 1076 KQQPSLVGKSFQKQTXXXXXXXXXXXXNGLSKKRKVA 1186
            K QPSLVGKS Q QT             GLSK++K+A
Sbjct: 564  KDQPSLVGKSMQMQT---KKRKRDQKQQGLSKRKKLA 597


>ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1|
            predicted protein [Populus trichocarpa]
          Length = 594

 Score =  518 bits (1334), Expect = e-144
 Identities = 268/393 (68%), Positives = 307/393 (78%)
 Frame = +2

Query: 2    LGSRKTGYDDQENAVPRPSKIQRQNLLLSATLNEKVNHLAKISLDNPVMIGLDGQKIEPM 181
            LGSR+ G     N V   S  Q QNLLLSATLNEKVNHLAKISL+NPVMIGLD +KI+P 
Sbjct: 200  LGSRQIGSVGNGNQVSSLSNFQGQNLLLSATLNEKVNHLAKISLENPVMIGLDDKKIQPD 259

Query: 182  STITRLXXXXXXXXXXXXXXKHSSKTPAVGAYNVPSQLFQRYLKAPCGSRLPVLLSILKH 361
             ++  +              K   K  + G Y +P+QL QRY+K PCGSRL VLLSILK+
Sbjct: 260  QSVDHIETAESDEDDGLGYSK--VKNSSTGDYKLPAQLVQRYVKVPCGSRLAVLLSILKN 317

Query: 362  LFEREPSQKVVVFFSTCDAVDFHYSLLSEFHFSAYPQTEDGVRQVFLGCKTLRLHGNMEQ 541
            LFERE S K+VVFFSTCDAVDFHYSLLSEF +S   Q+E    + FL C TLRLHGNM+Q
Sbjct: 318  LFEREASHKIVVFFSTCDAVDFHYSLLSEFCWSPNSQSEAEHTERFLRCNTLRLHGNMKQ 377

Query: 542  EDRTTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGE 721
            EDR  +FQAFKTEKSALLLSTD++ARGLDFPKVRCI+QYDSPGEATEYVHRVGRTARLGE
Sbjct: 378  EDRRNTFQAFKTEKSALLLSTDIAARGLDFPKVRCIVQYDSPGEATEYVHRVGRTARLGE 437

Query: 722  RGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKNHIKKSVFIDSHPWVL 901
            +G+SLLFLQP E+DYL DLEKHGVSLTEYP+LKVL SFPLYGQ    +K V +D HPWVL
Sbjct: 438  KGDSLLFLQPVEVDYLHDLEKHGVSLTEYPILKVLGSFPLYGQVYRARKFVSLDLHPWVL 497

Query: 902  SLQKALESFITSKPKMNELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFALKQ 1081
             LQ+ALESFI S+P+MN+LA+ AFCSWVRAYTAHRG+LKRIFM+KKLHLGHV++SF LKQ
Sbjct: 498  YLQRALESFILSEPRMNKLAQTAFCSWVRAYTAHRGDLKRIFMVKKLHLGHVSRSFGLKQ 557

Query: 1082 QPSLVGKSFQKQTXXXXXXXXXXXXNGLSKKRK 1180
            QPSLVG+SFQ Q+             GLSK+RK
Sbjct: 558  QPSLVGQSFQNQS---KKRKREGKQKGLSKQRK 587


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