BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001384
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   220   3e-55
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   215   1e-53
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   211   2e-52

>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  220 bits (560), Expect = 3e-55
 Identities = 112/143 (78%), Positives = 118/143 (82%)
 Frame = +3

Query: 99  MAXXXXXXXXMGYXXXXXXXXXXXXXXXDLDPNKAEDITGEPIDTEEKEEDQPVERPRKT 278
           MA        MGY               DL+ NK +++TGEPIDTE+KEE+QPVERPRKT
Sbjct: 1   MADDDYEDIDMGYEDEPPEPEIEEGAEEDLE-NKNDELTGEPIDTEDKEEEQPVERPRKT 59

Query: 279 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 458
           SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 60  SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119

Query: 459 SYEDWGVDELIVEDSWKRQVGGD 527
           SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  215 bits (547), Expect = 1e-53
 Identities = 110/143 (76%), Positives = 117/143 (81%)
 Frame = +3

Query: 99  MAXXXXXXXXMGYXXXXXXXXXXXXXXXDLDPNKAEDITGEPIDTEEKEEDQPVERPRKT 278
           MA        MGY               D++ NK ++ITGE IDTE+KEE+QPV+RPRKT
Sbjct: 1   MADEDYEDIDMGYEDEPPEPEIEEGAEEDVE-NKNDEITGESIDTEDKEEEQPVKRPRKT 59

Query: 279 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 458
           SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 60  SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119

Query: 459 SYEDWGVDELIVEDSWKRQVGGD 527
           SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  214 bits (546), Expect = 1e-53
 Identities = 109/143 (76%), Positives = 113/143 (79%)
 Frame = +3

Query: 99  MAXXXXXXXXMGYXXXXXXXXXXXXXXXDLDPNKAEDITGEPIDTEEKEEDQPVERPRKT 278
           MA        MGY               D + N  ED TGEPI+TE+KEE  PVERPRKT
Sbjct: 1   MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPIETEDKEEQAPVERPRKT 60

Query: 279 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 458
           SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61  SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120

Query: 459 SYEDWGVDELIVEDSWKRQVGGD 527
           SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  213 bits (542), Expect = 4e-53
 Identities = 108/143 (75%), Positives = 113/143 (79%)
 Frame = +3

Query: 99  MAXXXXXXXXMGYXXXXXXXXXXXXXXXDLDPNKAEDITGEPIDTEEKEEDQPVERPRKT 278
           MA        MGY               D D +  ED  GEPI+TE+KEE +PVERPRKT
Sbjct: 1   MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDKEEQEPVERPRKT 60

Query: 279 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 458
           SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61  SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120

Query: 459 SYEDWGVDELIVEDSWKRQVGGD 527
           SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  211 bits (536), Expect = 2e-52
 Identities = 101/115 (87%), Positives = 108/115 (93%)
 Frame = +3

Query: 183 DLDPNKAEDITGEPIDTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMV 362
           D++ N  ED+ G+PI+TE+KEE +  ERPRKTSKYMTKYERARILGTRALQISMNAPVMV
Sbjct: 10  DVENNNNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMV 69

Query: 363 ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 527
           ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 70  ELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124