BLASTX nr result

ID: Glycyrrhiza23_contig00001355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001355
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatu...   375   e-102
ref|XP_003549555.1| PREDICTED: 50S ribosomal protein L10, chloro...   330   6e-88
ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloro...   295   1e-77
ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloro...   294   3e-77
sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, ...   279   9e-73

>ref|XP_003610379.1| 50S ribosomal protein L10 [Medicago truncatula]
           gi|217071998|gb|ACJ84359.1| unknown [Medicago
           truncatula] gi|355511434|gb|AES92576.1| 50S ribosomal
           protein L10 [Medicago truncatula]
           gi|388522083|gb|AFK49103.1| unknown [Medicago
           truncatula]
          Length = 234

 Score =  375 bits (964), Expect = e-102
 Identities = 193/239 (80%), Positives = 203/239 (84%)
 Frame = +1

Query: 121 MEATATAVSFSLPPIKTQTFQILNRPINPFNPPTSLKPGPTSKTLRFRRRHGLPSINAAI 300
           MEATAT +SFSLP  KTQ+FQIL RPINPFNPPTS K  P SKT R        SINAAI
Sbjct: 1   MEATATLLSFSLPSTKTQSFQILTRPINPFNPPTSYKHRPISKTHRL-------SINAAI 53

Query: 301 SXXXXXXXXXXXXXQLENCYLLAGINYKGFTVKQFQELRKMLPETTKLVVAKNTLVYKAL 480
           S             QLENCYLLAGINYKGFTVKQFQELRK LPETTKLVVAKNTLVYKAL
Sbjct: 54  SRTKKEETVETVKEQLENCYLLAGINYKGFTVKQFQELRKTLPETTKLVVAKNTLVYKAL 113

Query: 481 EGTEWETLKPCMKGMNVWLFVHTEEIPAALKPYRDFQKEKKLEDNDFTGAVFEGKFYGPD 660
           EGT+WETLKPCM GMNVWLFVHTEEIP+A+KPYRDFQKEKKLE+NDFTGAVFEGKFYGPD
Sbjct: 114 EGTQWETLKPCMTGMNVWLFVHTEEIPSAIKPYRDFQKEKKLEENDFTGAVFEGKFYGPD 173

Query: 661 EFKTLETLPTREEIYANLLGSLKSPASALVSTLQAPARELIMVLKAHIKNLEEQAQGAA 837
           EFK LETLPTR EIYANLLGSLKSP+SALV+T+QAPARELIMVLKAHIK LEEQ QG+A
Sbjct: 174 EFKKLETLPTRGEIYANLLGSLKSPSSALVTTIQAPARELIMVLKAHIKKLEEQEQGSA 232


>ref|XP_003549555.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Glycine
           max]
          Length = 232

 Score =  330 bits (845), Expect = 6e-88
 Identities = 174/240 (72%), Positives = 190/240 (79%), Gaps = 1/240 (0%)
 Frame = +1

Query: 121 MEATATAVSFSLPPIKTQT-FQILNRPINPFNPPTSLKPGPTSKTLRFRRRHGLPSINAA 297
           MEATA+A+SF+LP  K Q   Q+L RP NPF  P        S++   R    LP+I AA
Sbjct: 1   MEATASAMSFALPSTKAQAQAQLLTRPTNPFTIP--------SRSPAHRPPPRLPTIRAA 52

Query: 298 ISXXXXXXXXXXXXXQLENCYLLAGINYKGFTVKQFQELRKMLPETTKLVVAKNTLVYKA 477
           I              QLENCYLLAGINYKGFTVKQFQELRK LPETTKL+VAKNTLVYKA
Sbjct: 53  IPRTKKEATVETVREQLENCYLLAGINYKGFTVKQFQELRKTLPETTKLIVAKNTLVYKA 112

Query: 478 LEGTEWETLKPCMKGMNVWLFVHTEEIPAALKPYRDFQKEKKLEDNDFTGAVFEGKFYGP 657
           +EGT WETLKPCMKGMNVWLFVHTEEIP+A+KPYR+FQKEKKLEDNDFTGAVFEGKFYGP
Sbjct: 113 VEGTPWETLKPCMKGMNVWLFVHTEEIPSAIKPYRNFQKEKKLEDNDFTGAVFEGKFYGP 172

Query: 658 DEFKTLETLPTREEIYANLLGSLKSPASALVSTLQAPARELIMVLKAHIKNLEEQAQGAA 837
           DE K LE+LPTR EIYA LLG+LKSPASALV TLQ+PAREL+ VLKAHIKNLEEQ QG A
Sbjct: 173 DEVKNLESLPTRAEIYATLLGALKSPASALVGTLQSPARELVTVLKAHIKNLEEQ-QGVA 231


>ref|XP_004143603.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  295 bits (756), Expect = 1e-77
 Identities = 154/238 (64%), Positives = 183/238 (76%), Gaps = 1/238 (0%)
 Frame = +1

Query: 121 MEATA-TAVSFSLPPIKTQTFQILNRPINPFNPPTSLKPGPTSKTLRFRRRHGLPSINAA 297
           MEA+  T  SF+ P   +     LNRP NP +   SL    T++T  +R   GL  ++AA
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLS--FSLPRHSTNQTRHYR---GL-KVSAA 54

Query: 298 ISXXXXXXXXXXXXXQLENCYLLAGINYKGFTVKQFQELRKMLPETTKLVVAKNTLVYKA 477
           IS             QLE+CYLLAGI YKGFTVKQFQELR+ LPET+KL+VAKNTLV KA
Sbjct: 55  ISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKA 114

Query: 478 LEGTEWETLKPCMKGMNVWLFVHTEEIPAALKPYRDFQKEKKLEDNDFTGAVFEGKFYGP 657
           +EGT WE LKPCMKGMNVWLFVH+EEIPAA+KPYRDFQKEKKLEDNDFTGAVFEGK+YGP
Sbjct: 115 IEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGP 174

Query: 658 DEFKTLETLPTREEIYANLLGSLKSPASALVSTLQAPARELIMVLKAHIKNLEEQAQG 831
           DEFK LET+P+R E+YA +LG L++PAS+LV T+QAPAREL+MVLKA+++ LEEQ  G
Sbjct: 175 DEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232


>ref|XP_004163071.1| PREDICTED: 50S ribosomal protein L10, chloroplastic-like [Cucumis
           sativus]
          Length = 235

 Score =  294 bits (753), Expect = 3e-77
 Identities = 154/238 (64%), Positives = 182/238 (76%), Gaps = 1/238 (0%)
 Frame = +1

Query: 121 MEAT-ATAVSFSLPPIKTQTFQILNRPINPFNPPTSLKPGPTSKTLRFRRRHGLPSINAA 297
           MEA+  T  SF+ P   +     LNRP NP +   SL    T++T  +R   GL  + AA
Sbjct: 1   MEASFITFTSFTPPSSSSTQILTLNRPTNPLS--FSLPRHSTNQTRHYR---GL-KVAAA 54

Query: 298 ISXXXXXXXXXXXXXQLENCYLLAGINYKGFTVKQFQELRKMLPETTKLVVAKNTLVYKA 477
           IS             QLE+CYLLAGI YKGFTVKQFQELR+ LPET+KL+VAKNTLV KA
Sbjct: 55  ISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKA 114

Query: 478 LEGTEWETLKPCMKGMNVWLFVHTEEIPAALKPYRDFQKEKKLEDNDFTGAVFEGKFYGP 657
           +EGT WE LKPCMKGMNVWLFVH+EEIPAA+KPYRDFQKEKKLEDNDFTGAVFEGK+YGP
Sbjct: 115 IEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGP 174

Query: 658 DEFKTLETLPTREEIYANLLGSLKSPASALVSTLQAPARELIMVLKAHIKNLEEQAQG 831
           DEFK LET+P+R E+YA +LG L++PAS+LV T+QAPAREL+MVLKA+++ LEEQ  G
Sbjct: 175 DEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232


>sp|O80362.1|RK10_TOBAC RecName: Full=50S ribosomal protein L10, chloroplastic; AltName:
           Full=CL10; Flags: Precursor gi|3298441|dbj|BAA31511.1|
           chloroplast ribosomal protein L10 [Nicotiana tabacum]
          Length = 227

 Score =  279 bits (714), Expect = 9e-73
 Identities = 147/230 (63%), Positives = 168/230 (73%), Gaps = 2/230 (0%)
 Frame = +1

Query: 139 AVSFSLPPIKTQT--FQILNRPINPFNPPTSLKPGPTSKTLRFRRRHGLPSINAAISXXX 312
           A  F+LP   + +  F + +   N    PT     P SK L         +I +AIS   
Sbjct: 3   ATFFTLPSSTSHSYPFSLKSHFNNSLTLPTHPHFKPKSKNL---------TIRSAISRTK 53

Query: 313 XXXXXXXXXXQLENCYLLAGINYKGFTVKQFQELRKMLPETTKLVVAKNTLVYKALEGTE 492
                     QLE+CYLLAGI YKG TVKQFQELR  LP+TTKL+VAKNTLV KA+EGT+
Sbjct: 54  KEETVETVKQQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTK 113

Query: 493 WETLKPCMKGMNVWLFVHTEEIPAALKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKT 672
           WE LKPCMKGMN WLFVH+EEIPAALKPYR FQKEKKLE+NDFTGAVFEGKFYGP+EFK 
Sbjct: 114 WEALKPCMKGMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKA 173

Query: 673 LETLPTREEIYANLLGSLKSPASALVSTLQAPARELIMVLKAHIKNLEEQ 822
           LETLPTR EIYA LLGSLK PASA+V T+QAPAR L+MVLKA++K LEE+
Sbjct: 174 LETLPTRAEIYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEE 223


Top