BLASTX nr result
ID: Glycyrrhiza23_contig00001317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00001317
(1004 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACU14088.1| unknown [Glycine max] 394 e-107
gb|AFK33315.1| unknown [Lotus japonicus] 392 e-107
ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulf... 390 e-106
gb|ACU20677.1| unknown [Glycine max] 389 e-106
ref|NP_001237648.1| Rieske iron-sulphur protein precursor [Glyci... 384 e-104
>gb|ACU14088.1| unknown [Glycine max]
Length = 227
Score = 394 bits (1011), Expect = e-107
Identities = 186/216 (86%), Positives = 192/216 (88%)
Frame = +1
Query: 133 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 312
P TPSQLCSGKSGIF PSQAL+VKP +RQMMGK KGMRI CQATSIPADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQATSIPADRVPDMGKRQLM 67
Query: 313 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 492
NLLLLGAISLP+AGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 493 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 672
L QGLKGDPTYLVVEKDR LATY INAVCTHLGCVVPWN AENKFICPCHGSQYNDQGRV
Sbjct: 128 LAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGSQYNDQGRV 187
Query: 673 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDA 780
RGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDA
Sbjct: 188 ARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDA 223
>gb|AFK33315.1| unknown [Lotus japonicus]
Length = 227
Score = 392 bits (1007), Expect = e-107
Identities = 187/216 (86%), Positives = 196/216 (90%)
Frame = +1
Query: 133 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 312
P TPSQLCSGKSGIFCPSQAL+VKPAR QM+GK KG+RI C ATSIPADRVPDM KR+L+
Sbjct: 8 PVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATSIPADRVPDMEKRKLL 67
Query: 313 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 492
NLLLLGAISLP+AGMLVPYATFFAPP +AKDAIGNDV+AEQWLK HGPGDRT
Sbjct: 68 NLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKAHGPGDRT 127
Query: 493 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 672
LTQGLKGDPTYLVVEKDR LATYGINAVCTHLGCVVP+N AE KFICPCHGSQYNDQGRV
Sbjct: 128 LTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQYNDQGRV 187
Query: 673 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDA 780
VRGPAPLSLALAHCDV DGKVVFVPWVETDFRTGDA
Sbjct: 188 VRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDA 223
>ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Glycine max]
Length = 227
Score = 390 bits (1001), Expect = e-106
Identities = 185/216 (85%), Positives = 192/216 (88%)
Frame = +1
Query: 133 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 312
P TPSQLCSGKSGIF SQAL+VKP +RQMMGK KG+RI CQATSI ADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPDMGKRQLM 67
Query: 313 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 492
NLLLLGAISLPTAGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 493 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 672
LTQGLKGDPTYLVVEKDR LAT+ INAVCTHLGCVVPWN AENKFICPCHGSQYNDQGRV
Sbjct: 128 LTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQYNDQGRV 187
Query: 673 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDA 780
VRGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDA
Sbjct: 188 VRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDA 223
>gb|ACU20677.1| unknown [Glycine max]
Length = 262
Score = 389 bits (1000), Expect = e-106
Identities = 197/268 (73%), Positives = 207/268 (77%)
Frame = +1
Query: 133 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 312
P TPSQLCSGKSGIF SQAL+VKP +RQMMGK KG+RI CQATSI ADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPDMGKRQLM 67
Query: 313 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 492
NLLLLGAISLPTAGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 493 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 672
LTQGLKGDPTYLVVEKDR LAT+ INAVCTHLGCVVPWN AENKFICPCHGSQYNDQGRV
Sbjct: 128 LTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQYNDQGRV 187
Query: 673 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAXXXXXXXXXXXXXVIYICV*I*NS 852
VRGPAPLSLALAHCD+DDGKVVF PWVETDFRT VIYI
Sbjct: 188 VRGPAPLSLALAHCDIDDGKVVFFPWVETDFRT--VMLHGGLRLLKTSVVIYI------- 238
Query: 853 NNLFCFDQTICFVLMHKTYFVIKLIFCE 936
F + I F +MH F IKLIFC+
Sbjct: 239 ---FKHEINILFRIMH-NIFCIKLIFCD 262
>ref|NP_001237648.1| Rieske iron-sulphur protein precursor [Glycine max]
gi|158935079|emb|CAM57107.1| Rieske iron-sulphur protein
precursor [Glycine max]
Length = 227
Score = 384 bits (986), Expect = e-104
Identities = 182/216 (84%), Positives = 190/216 (87%)
Frame = +1
Query: 133 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 312
P TPSQLCSGKSGIF SQAL+VKP +RQMMGK KG+RI CQATSI ADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPDMGKRQLM 67
Query: 313 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 492
NLLLLGAISLPTAGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 493 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 672
LTQGLKG PTYL VEKDR LAT+ INAVCTHLGCVVPWN AENKFICPCHGS+YNDQGRV
Sbjct: 128 LTQGLKGGPTYLAVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSRYNDQGRV 187
Query: 673 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDA 780
VRGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDA
Sbjct: 188 VRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDA 223