BLASTX nr result

ID: Glycyrrhiza23_contig00001311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001311
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   468   e-130
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [...   468   e-130
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   467   e-129
gb|ACU24295.1| unknown [Glycine max]                                  465   e-129
gb|ACU24626.1| unknown [Glycine max]                                  465   e-129

>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  468 bits (1205), Expect = e-130
 Identities = 232/255 (90%), Positives = 236/255 (92%)
 Frame = +3

Query: 24  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 203
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 204 VIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 383
           VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 384 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDXXXX 563
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 564 XXXXXXXXXXXXXXIKSREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 743
                         IK+REKHKGSFETIHVQDATGHEFATR+GNVFTIGKGTKPWISLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 744 GKGIKLSIIEEARKR 788
           GKGIKLSIIEEARKR
Sbjct: 241 GKGIKLSIIEEARKR 255


>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  468 bits (1203), Expect = e-130
 Identities = 230/255 (90%), Positives = 236/255 (92%)
 Frame = +3

Query: 24  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 203
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 204 VIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 383
           VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 384 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDXXXX 563
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDT+KLDLEENKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 564 XXXXXXXXXXXXXXIKSREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 743
                         IK+REKHKGSFETIHVQDATGHEFATR+GNVFTIGKGTKPWISLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 744 GKGIKLSIIEEARKR 788
           GKGIKLSIIEEARKR
Sbjct: 241 GKGIKLSIIEEARKR 255


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  467 bits (1202), Expect = e-129
 Identities = 231/255 (90%), Positives = 236/255 (92%)
 Frame = +3

Query: 24  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 203
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 204 VIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 383
           VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 384 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDXXXX 563
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 564 XXXXXXXXXXXXXXIKSREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 743
                         IK+REKHKGSFETIHVQD+TGHEFATR+GNVFTIGKGTKPWISLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 744 GKGIKLSIIEEARKR 788
           GKGIKLSIIEEARKR
Sbjct: 241 GKGIKLSIIEEARKR 255


>gb|ACU24295.1| unknown [Glycine max]
          Length = 264

 Score =  465 bits (1197), Expect = e-129
 Identities = 229/255 (89%), Positives = 236/255 (92%)
 Frame = +3

Query: 24  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 203
           MARGLKK+LKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKYLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 204 VIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 383
           VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 384 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDXXXX 563
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDT+KLDLEENKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 564 XXXXXXXXXXXXXXIKSREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 743
                         IK+REKHKGSFETIHVQDATGHEFATR+GNVFTIGKGTKPWISLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 744 GKGIKLSIIEEARKR 788
           GKGIKLSIIEEARKR
Sbjct: 241 GKGIKLSIIEEARKR 255


>gb|ACU24626.1| unknown [Glycine max]
          Length = 264

 Score =  465 bits (1196), Expect = e-129
 Identities = 230/255 (90%), Positives = 234/255 (91%)
 Frame = +3

Query: 24  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 203
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 204 VIAILMQRHVLVDNKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 383
           VIAILMQRHVLVD KVRTDKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHSVRD+EAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAK 120

Query: 384 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDXXXX 563
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IRANDTIKLDLEENKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 564 XXXXXXXXXXXXXXIKSREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPK 743
                         IK+REKHKGSFETIHVQDATGHEFATR+GNVFTIGKGTKPWISLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 744 GKGIKLSIIEEARKR 788
           GKGIKLSIIEEARKR
Sbjct: 241 GKGIKLSIIEEARKR 255


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