BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001285
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538973.1| PREDICTED: transcription elongation regulato...   334   2e-89
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...   334   2e-89
ref|XP_003540642.1| PREDICTED: transcription elongation regulato...   330   3e-88
ref|XP_003607201.1| Transcription elongation regulator [Medicago...   321   2e-85
ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative ...   293   4e-77

>ref|XP_003538973.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 857

 Score =  334 bits (856), Expect = 2e-89
 Identities = 178/281 (63%), Positives = 190/281 (67%)
 Frame = +3

Query: 3    LKPPSVQSSPSALDLIKKKLQDXXXXXXXXXXXXXXVQTGSESNGSKATEYTAXXXXXXX 182
            LKP S+Q+SPSALDLIKKKLQD              VQTG ESNGSK  + TA       
Sbjct: 365  LKPSSLQNSPSALDLIKKKLQDSGTPVASSSIPAPSVQTGPESNGSKTVDSTAKGLQVDN 424

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECINQFKEMLKERGVAPFSKWEKELPKIV 362
                                      GP+KEECI QFKEMLKERGVAPFSKWEKELPKIV
Sbjct: 425  NKDKAKDTNGDANVSDTSSDSEDEDNGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIV 484

Query: 363  FDPRFKAIPSYSARRSLFEHYVKTXXXXXXXXXXXXXXXXXXGFKQLLDEASEDINQNTD 542
            FDPRFKAIPSYSARRSLFEHYVKT                  GFK+LLDEASEDIN NTD
Sbjct: 485  FDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAALKAAIEGFKRLLDEASEDINYNTD 544

Query: 543  YQTFRKKWGNDPRFEALDRKEREHLLSERVLPLXXXXXXXXXXXXXXXXXTFKSMLKERG 722
            YQTFRKKW NDPRFEALDRKE+EHLL+ERVLPL                 +FKSMLKERG
Sbjct: 545  YQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKKAAEEKAQAMRAAAAASFKSMLKERG 604

Query: 723  DVTFNSRWSRVKESLRDDPRYKSVKHEDREVLFNEYISELK 845
            D++FNSRWSRVKE+LRDDPRYK V+HEDREVLFNEYISELK
Sbjct: 605  DISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELK 645


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score =  334 bits (856), Expect = 2e-89
 Identities = 178/281 (63%), Positives = 190/281 (67%)
 Frame = +3

Query: 3    LKPPSVQSSPSALDLIKKKLQDXXXXXXXXXXXXXXVQTGSESNGSKATEYTAXXXXXXX 182
            LKP S+Q+SPSALDLIKKKLQD              VQTG ESNGSK  + TA       
Sbjct: 515  LKPSSLQNSPSALDLIKKKLQDSGTPVASSSIPAPSVQTGPESNGSKTVDSTAKGLQVDN 574

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECINQFKEMLKERGVAPFSKWEKELPKIV 362
                                      GP+KEECI QFKEMLKERGVAPFSKWEKELPKIV
Sbjct: 575  NKDKAKDTNGDANVSDTSSDSEDEDNGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIV 634

Query: 363  FDPRFKAIPSYSARRSLFEHYVKTXXXXXXXXXXXXXXXXXXGFKQLLDEASEDINQNTD 542
            FDPRFKAIPSYSARRSLFEHYVKT                  GFK+LLDEASEDIN NTD
Sbjct: 635  FDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKRLLDEASEDINYNTD 694

Query: 543  YQTFRKKWGNDPRFEALDRKEREHLLSERVLPLXXXXXXXXXXXXXXXXXTFKSMLKERG 722
            YQTFRKKW NDPRFEALDRKE+EHLL+ERVLPL                 +FKSMLKERG
Sbjct: 695  YQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKKAAEEKAQAMRAAAAASFKSMLKERG 754

Query: 723  DVTFNSRWSRVKESLRDDPRYKSVKHEDREVLFNEYISELK 845
            D++FNSRWSRVKE+LRDDPRYK V+HEDREVLFNEYISELK
Sbjct: 755  DISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELK 795


>ref|XP_003540642.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 930

 Score =  330 bits (846), Expect = 3e-88
 Identities = 176/281 (62%), Positives = 190/281 (67%)
 Frame = +3

Query: 3    LKPPSVQSSPSALDLIKKKLQDXXXXXXXXXXXXXXVQTGSESNGSKATEYTAXXXXXXX 182
            LKP ++Q+S SALDLIKKKLQD              VQ G ESNGSK  + TA       
Sbjct: 438  LKPSTLQNSSSALDLIKKKLQDSGTPITPSSIHAPSVQIGPESNGSKTVDSTAKGVQVDN 497

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECINQFKEMLKERGVAPFSKWEKELPKIV 362
                                      GP+KEECI QFKEMLKERGVAPFSKWEKELPKIV
Sbjct: 498  NKDKQKDTNGDADVSDTSSDSEDEDNGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIV 557

Query: 363  FDPRFKAIPSYSARRSLFEHYVKTXXXXXXXXXXXXXXXXXXGFKQLLDEASEDINQNTD 542
            FDPRFKAIPSYSARRSLFEHYVKT                  GFK+LLDEASEDIN NTD
Sbjct: 558  FDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKRLLDEASEDINYNTD 617

Query: 543  YQTFRKKWGNDPRFEALDRKEREHLLSERVLPLXXXXXXXXXXXXXXXXXTFKSMLKERG 722
            +QTFRKKWGNDPRFEALDRKE+EHLL+ERVLPL                 +FKSMLKERG
Sbjct: 618  FQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKAAEEKAQAMRAAAAASFKSMLKERG 677

Query: 723  DVTFNSRWSRVKESLRDDPRYKSVKHEDREVLFNEYISELK 845
            D++FNSRW+RVKESLRDDPRYKSV+HEDREVLFNEYISELK
Sbjct: 678  DMSFNSRWARVKESLRDDPRYKSVRHEDREVLFNEYISELK 718


>ref|XP_003607201.1| Transcription elongation regulator [Medicago truncatula]
            gi|355508256|gb|AES89398.1| Transcription elongation
            regulator [Medicago truncatula]
          Length = 1013

 Score =  321 bits (822), Expect = 2e-85
 Identities = 179/300 (59%), Positives = 189/300 (63%), Gaps = 20/300 (6%)
 Frame = +3

Query: 6    KPPSVQSSPSALDLIKKKLQDXXXXXXXXXXXXXXVQTGSESNGSKATEYTAXXXXXXXX 185
            KP  VQSSPSALDLIKKKLQ+              VQ GSESNGSKAT+ TA        
Sbjct: 502  KPFIVQSSPSALDLIKKKLQESGAPVTSSSIPTPSVQPGSESNGSKATDSTAKSLQNDNS 561

Query: 186  XXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECINQFKEMLKERGVAPFSKWEKELPKIVF 365
                                     GP+KEECINQFKEMLKERGVAPFSKWEKELPKIVF
Sbjct: 562  KDKQKDANGDANVSDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKIVF 621

Query: 366  DPRFKAIPSYSARRSLFEHYVKTXXXXXXXXXXXXXXXXXXGFKQLLDEASEDINQNTDY 545
            DPRFKAIPSYSARRSLFEHYVK                   GFKQLLDEASEDI+  TD 
Sbjct: 622  DPRFKAIPSYSARRSLFEHYVKNRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDDKTDS 681

Query: 546  QTFRKKWGNDPRFEALDRKEREHLLSERVLPLXXXXXXXXXXXXXXXXXTFKSMLKERGD 725
             TFRKKWGNDPRFEALDRKEREHLL+ERVLPL                 +FKSMLKE+G+
Sbjct: 682  HTFRKKWGNDPRFEALDRKEREHLLNERVLPLKKATEEKAQAMRDAAADSFKSMLKEQGE 741

Query: 726  VTFNSRWSR--------------------VKESLRDDPRYKSVKHEDREVLFNEYISELK 845
            +TFNSRWSR                    VKESLRDDPRYKSVKHEDRE+LFNEYISELK
Sbjct: 742  ITFNSRWSRMLYGTKCWAVKNQHENKVSLVKESLRDDPRYKSVKHEDRELLFNEYISELK 801


>ref|XP_002515795.1| Pre-mRNA-processing protein PRP40, putative [Ricinus communis]
            gi|223545064|gb|EEF46576.1| Pre-mRNA-processing protein
            PRP40, putative [Ricinus communis]
          Length = 886

 Score =  293 bits (751), Expect = 4e-77
 Identities = 156/281 (55%), Positives = 182/281 (64%)
 Frame = +3

Query: 3    LKPPSVQSSPSALDLIKKKLQDXXXXXXXXXXXXXXVQTGSESNGSKATEYTAXXXXXXX 182
            L+  +   + SALDLIKKKLQD                T  ESNGS+A E T+       
Sbjct: 393  LRASNALGASSALDLIKKKLQDSGTPVTSSPAPVSLGITTPESNGSRAMEATSKGLPSEN 452

Query: 183  XXXXXXXXXXXXXXXXXXXXXXXXXXGPTKEECINQFKEMLKERGVAPFSKWEKELPKIV 362
                                      GPTKEECI QFK+MLKERG+APFSKWEK LPKIV
Sbjct: 453  SKEKLKDANGDANASDSSSDSEEEDNGPTKEECIIQFKDMLKERGIAPFSKWEKVLPKIV 512

Query: 363  FDPRFKAIPSYSARRSLFEHYVKTXXXXXXXXXXXXXXXXXXGFKQLLDEASEDINQNTD 542
            FDPRF+AIPS+SARRSLFEHYVKT                  GF+QLL+EASE+I+ NTD
Sbjct: 513  FDPRFQAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFRQLLEEASEEIDHNTD 572

Query: 543  YQTFRKKWGNDPRFEALDRKEREHLLSERVLPLXXXXXXXXXXXXXXXXXTFKSMLKERG 722
            YQ+FR+KWGNDPRFEA+DRK+REHLL ERVLPL                 +FKSML+++G
Sbjct: 573  YQSFRRKWGNDPRFEAVDRKDREHLLHERVLPLKKAAQEKAQAERAAAAASFKSMLQDKG 632

Query: 723  DVTFNSRWSRVKESLRDDPRYKSVKHEDREVLFNEYISELK 845
            D+T NSRWS+VKESLR+DPRYKSVKHE+REVLFNEY+SELK
Sbjct: 633  DLTVNSRWSKVKESLRNDPRYKSVKHEEREVLFNEYLSELK 673