BLASTX nr result

ID: Glycyrrhiza23_contig00001267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001267
         (2799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   567   e-160
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                 564   e-160
ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   561   e-158
ref|XP_003526716.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   561   e-158
ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   558   e-158

>ref|XP_002516674.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
            gi|223544169|gb|EEF45693.1| Ubiquitin ligase SINAT3,
            putative [Ricinus communis]
          Length = 346

 Score =  567 bits (1462), Expect(2) = e-160
 Identities = 269/331 (81%), Positives = 274/331 (82%)
 Frame = +3

Query: 1524 MDLDSIECVSYSDGMDEDEIQHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1703
            M+LDSIECVS SDG+DEDEI HH                                     
Sbjct: 1    MELDSIECVSSSDGLDEDEIHHHNLHNHNNNHHHHLHHQFPSSKSYNATTNNNNNNNNNN 60

Query: 1704 XXXXXXXXXXXXXXXXSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 1883
                            SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Sbjct: 61   NNTHNVVGPTSIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 120

Query: 1884 QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECS 2063
            QELGDIRCLALEKVAESLELPCKYY+LGCPEIFPYYSKLKHE VCNFRPYNCPYAGSECS
Sbjct: 121  QELGDIRCLALEKVAESLELPCKYYNLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECS 180

Query: 2064 VVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 2243
            VVGDIPFLV+HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE
Sbjct: 181  VVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 240

Query: 2244 AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 2423
            AFQLGMAPVYMAFLRFMGDE EARNYSYSLEVGANGRKLIWEGTPRS+RDSHRKVRDSHD
Sbjct: 241  AFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHD 300

Query: 2424 GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 2516
            GLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Sbjct: 301  GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 331



 Score = 26.2 bits (56), Expect(2) = e-160
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 2617 DAGVCIPNLCS 2649
            +AGVC+PNLCS
Sbjct: 336  EAGVCMPNLCS 346


>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score =  564 bits (1454), Expect(2) = e-160
 Identities = 271/331 (81%), Positives = 274/331 (82%)
 Frame = +3

Query: 1524 MDLDSIECVSYSDGMDEDEIQHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1703
            MDLDSIECVS SDGMDEDEI  H                                     
Sbjct: 1    MDLDSIECVSSSDGMDEDEIHAH----------------------HHSEFSSTKARNGGG 38

Query: 1704 XXXXXXXXXXXXXXXXSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 1883
                            SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Sbjct: 39   NNNNAAMGPTAITPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 98

Query: 1884 QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECS 2063
            QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHET+CNFRPY+CPYAGSECS
Sbjct: 99   QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETICNFRPYSCPYAGSECS 158

Query: 2064 VVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 2243
            VVGDIPFLV HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE
Sbjct: 159  VVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 218

Query: 2244 AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 2423
            AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRS+RDSHRKVRDSHD
Sbjct: 219  AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHD 278

Query: 2424 GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 2516
            GLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Sbjct: 279  GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 309



 Score = 28.9 bits (63), Expect(2) = e-160
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 2617 DAGVCIPNLCS 2649
            DAGVCIPNLCS
Sbjct: 314  DAGVCIPNLCS 324


>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
            gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
            gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
            [Medicago truncatula]
          Length = 333

 Score =  561 bits (1445), Expect(2) = e-158
 Identities = 270/331 (81%), Positives = 272/331 (82%)
 Frame = +3

Query: 1524 MDLDSIECVSYSDGMDEDEIQHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1703
            MDLDSIECVS SDGMDEDEIQH                                      
Sbjct: 1    MDLDSIECVSSSDGMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIA 60

Query: 1704 XXXXXXXXXXXXXXXXSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 1883
                            SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Sbjct: 61   PAT-------------SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 107

Query: 1884 QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECS 2063
            QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHET+CNFRPY CPYAGSECS
Sbjct: 108  QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETICNFRPYTCPYAGSECS 167

Query: 2064 VVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 2243
             VGDI FLV HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE
Sbjct: 168  AVGDINFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 227

Query: 2244 AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 2423
            AFQLGMAPVYMAFLRFMGDENEARNY+YSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD
Sbjct: 228  AFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 287

Query: 2424 GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 2516
            GLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Sbjct: 288  GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 318



 Score = 27.3 bits (59), Expect(2) = e-158
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 2617 DAGVCIPNLCS 2649
            D GVCIPNLCS
Sbjct: 323  DGGVCIPNLCS 333


>ref|XP_003526716.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]
          Length = 327

 Score =  561 bits (1447), Expect(2) = e-158
 Identities = 271/335 (80%), Positives = 276/335 (82%), Gaps = 4/335 (1%)
 Frame = +3

Query: 1524 MDLDSIECVSYSDGMDEDEIQ----HHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1691
            MDL+S+ECVS SDGMDEDEI     HH+                                
Sbjct: 1    MDLESVECVSSSDGMDEDEIHANHHHHSEFSSTKPRNGGTSNINSVGPNAIAPAT----- 55

Query: 1692 XXXXXXXXXXXXXXXXXXXXSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRC 1871
                                SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRC
Sbjct: 56   --------------------SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRC 95

Query: 1872 PTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYNCPYAG 2051
            PTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPY+CPYAG
Sbjct: 96   PTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYSCPYAG 155

Query: 2052 SECSVVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC 2231
            SECSVVGDIPFLV HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC
Sbjct: 156  SECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC 215

Query: 2232 LHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVR 2411
            LHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRS+RDSHRKVR
Sbjct: 216  LHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVR 275

Query: 2412 DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 2516
            DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Sbjct: 276  DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKE 310



 Score = 26.2 bits (56), Expect(2) = e-158
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 2617 DAGVCIPNLCS 2649
            +AGVC+PNLCS
Sbjct: 317  EAGVCMPNLCS 327


>ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Vitis vinifera]
          Length = 327

 Score =  558 bits (1437), Expect(2) = e-158
 Identities = 269/331 (81%), Positives = 274/331 (82%)
 Frame = +3

Query: 1524 MDLDSIECVSYSDGMDEDEIQHHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1703
            MDLD+IECVS SDGM+E+EI HH                                     
Sbjct: 1    MDLDNIECVSSSDGMEEEEI-HHLHHHHHNLNHNHVVHQFSSKPLQNGVVPPATAPAT-- 57

Query: 1704 XXXXXXXXXXXXXXXXSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 1883
                            SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR
Sbjct: 58   ----------------SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCR 101

Query: 1884 QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHETVCNFRPYNCPYAGSECS 2063
            QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHE VCNFRPYNCPYAGSECS
Sbjct: 102  QELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECS 161

Query: 2064 VVGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 2243
            VVGDIPFLV+HLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE
Sbjct: 162  VVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE 221

Query: 2244 AFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 2423
            AFQLGM+PVYMAFLRFMGDENEARNY YSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD
Sbjct: 222  AFQLGMSPVYMAFLRFMGDENEARNYGYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHD 281

Query: 2424 GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 2516
            GLIIQRNMALFFSGGDRKELKLRVTGRIWKE
Sbjct: 282  GLIIQRNMALFFSGGDRKELKLRVTGRIWKE 312



 Score = 28.9 bits (63), Expect(2) = e-158
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 2617 DAGVCIPNLCS 2649
            DAGVCIPNLCS
Sbjct: 317  DAGVCIPNLCS 327


Top