BLASTX nr result

ID: Glycyrrhiza23_contig00001153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001153
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40674.1| unknown [Lotus japonicus]                              401   e-109
ref|XP_003538726.1| PREDICTED: thylakoid lumenal protein At1g122...   392   e-106
ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatu...   388   e-105
ref|XP_003611268.1| Thylakoid lumenal protein [Medicago truncatu...   369   e-100
ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250...   365   1e-98

>gb|AFK40674.1| unknown [Lotus japonicus]
          Length = 273

 Score =  401 bits (1031), Expect = e-109
 Identities = 206/243 (84%), Positives = 220/243 (90%), Gaps = 1/243 (0%)
 Frame = -2

Query: 1021 NIPHVHSKSSPVV-CQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALADLNKYE 845
            N  H H KSSP+V CQMNS+RDH PQ+S+KWGKLVSATLAAAVIAFSSDMSALADLNK+E
Sbjct: 29   NSLHFHPKSSPIVLCQMNSNRDH-PQESKKWGKLVSATLAAAVIAFSSDMSALADLNKFE 87

Query: 844  AELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVA 665
            AE+RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGAYLEKAVA
Sbjct: 88   AEIRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVA 147

Query: 664  YKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQK 485
            YKANF+GADLSDTLMDRMVLNEANLTNAIL RTVLTRSDLGG++IEGADFSDAVLDL QK
Sbjct: 148  YKANFSGADLSDTLMDRMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVLDLTQK 207

Query: 484  QALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXLDRDGFCDDATGL 305
             ALCKYASGTNPVTGVSTR+SLGCGNKRRNAYG              L+RDGFCD+ATGL
Sbjct: 208  LALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLNRDGFCDEATGL 267

Query: 304  CDA 296
            CD+
Sbjct: 268  CDS 270


>ref|XP_003538726.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
            [Glycine max]
          Length = 260

 Score =  392 bits (1007), Expect = e-106
 Identities = 204/242 (84%), Positives = 214/242 (88%)
 Frame = -2

Query: 1018 IPHVHSKSSPVVCQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALADLNKYEAE 839
            I H HSKS PVV +  ++ +     S KWGK+VSATLAAAVIAFSSDMSALADLNK+EAE
Sbjct: 24   ISHSHSKSFPVVVKSVANAE-----STKWGKVVSATLAAAVIAFSSDMSALADLNKFEAE 78

Query: 838  LRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYK 659
            +RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYK
Sbjct: 79   MRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYK 138

Query: 658  ANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQKQA 479
            ANF+GADLSDTLMDRMVLNEANLTNAIL RTVLTRSDLGGA+IEGADFSDAVLDLPQKQA
Sbjct: 139  ANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKQA 198

Query: 478  LCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXLDRDGFCDDATGLCD 299
            LCKYASGTNPVTGVSTR+SLGCGNKRRNAYG              LDRDGFCDDATGLCD
Sbjct: 199  LCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDDATGLCD 258

Query: 298  AK 293
            AK
Sbjct: 259  AK 260


>ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatula]
            gi|355512602|gb|AES94225.1| Thylakoid lumenal protein
            [Medicago truncatula]
          Length = 262

 Score =  388 bits (997), Expect = e-105
 Identities = 194/237 (81%), Positives = 213/237 (89%)
 Frame = -2

Query: 1003 SKSSPVVCQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALADLNKYEAELRGEF 824
            SKSS V+C+M+ + DH  + ++ WGKLVSATLAAAVI FSSDMSALADLNK+EAE+RGEF
Sbjct: 26   SKSSQVICKMSLNNDHPQESNKNWGKLVSATLAAAVIVFSSDMSALADLNKFEAEVRGEF 85

Query: 823  GIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTG 644
            GIGSAAQFGSADL+K VHVNENFRRANFT+ADMRESDFSGSTFNGAY+EKAVA+KANFTG
Sbjct: 86   GIGSAAQFGSADLKKTVHVNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTG 145

Query: 643  ADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQKQALCKYA 464
            ADLSDTLMDRMVLNEANLTNAIL+RTVLTRSDLGGA+IEGADFSDAVLDLPQK ALCKYA
Sbjct: 146  ADLSDTLMDRMVLNEANLTNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYA 205

Query: 463  SGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXLDRDGFCDDATGLCDAK 293
            SGTNPVTGVSTR+SLGCGNKRRNAYG              LDRDGFCD+A+GLCD+K
Sbjct: 206  SGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLDRDGFCDEASGLCDSK 262


>ref|XP_003611268.1| Thylakoid lumenal protein [Medicago truncatula]
           gi|355512603|gb|AES94226.1| Thylakoid lumenal protein
           [Medicago truncatula]
          Length = 232

 Score =  369 bits (948), Expect = e-100
 Identities = 185/219 (84%), Positives = 200/219 (91%)
 Frame = -2

Query: 949 QDSRKWGKLVSATLAAAVIAFSSDMSALADLNKYEAELRGEFGIGSAAQFGSADLRKAVH 770
           + ++ WGKLVSATLAAAVI FSSDMSALADLNK+EAE+RGEFGIGSAAQFGSADL+K VH
Sbjct: 14  ESNKNWGKLVSATLAAAVIVFSSDMSALADLNKFEAEVRGEFGIGSAAQFGSADLKKTVH 73

Query: 769 VNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANL 590
           VNENFRRANFT+ADMRESDFSGSTFNGAY+EKAVA+KANFTGADLSDTLMDRMVLNEANL
Sbjct: 74  VNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRMVLNEANL 133

Query: 589 TNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRLSLGCG 410
           TNAIL+RTVLTRSDLGGA+IEGADFSDAVLDLPQK ALCKYASGTNPVTGVSTR+SLGCG
Sbjct: 134 TNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYASGTNPVTGVSTRVSLGCG 193

Query: 409 NKRRNAYGXXXXXXXXXXXXXXLDRDGFCDDATGLCDAK 293
           NKRRNAYG              LDRDGFCD+A+GLCD+K
Sbjct: 194 NKRRNAYGTPSSPLLSAPPQKLLDRDGFCDEASGLCDSK 232


>ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis
            vinifera]
          Length = 596

 Score =  365 bits (938), Expect = 1e-98
 Identities = 189/245 (77%), Positives = 206/245 (84%), Gaps = 5/245 (2%)
 Frame = -2

Query: 1012 HVHSKSSP--VVCQMNSDRDHHPQ---DSRKWGKLVSATLAAAVIAFSSDMSALADLNKY 848
            H+ S S P  VVC++   R ++ +   +S+KW +LVS  LAAAV+  S  M A+ADLNKY
Sbjct: 352  HLQSPSKPFTVVCRIELQRGNYCRANAESKKWQRLVSTALAAAVVTLSPVMPAVADLNKY 411

Query: 847  EAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAV 668
            EAE RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGAYLEKAV
Sbjct: 412  EAETRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAV 471

Query: 667  AYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQ 488
            AYKANFTGADLSDTLMDRMVLNEANLTNA+LARTVLTRSDLGGAVIEGADFSDAV+DLPQ
Sbjct: 472  AYKANFTGADLSDTLMDRMVLNEANLTNAVLARTVLTRSDLGGAVIEGADFSDAVIDLPQ 531

Query: 487  KQALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXLDRDGFCDDATG 308
            KQALCKYASGTNP+TGVSTR SLGCGN RR+AYG              LDRDGFCD+ TG
Sbjct: 532  KQALCKYASGTNPITGVSTRASLGCGNSRRSAYGSPSSPLLSAPPPKLLDRDGFCDEGTG 591

Query: 307  LCDAK 293
            LCDAK
Sbjct: 592  LCDAK 596



 Score =  177 bits (448), Expect = 7e-42
 Identities = 114/219 (52%), Positives = 136/219 (62%), Gaps = 13/219 (5%)
 Frame = -2

Query: 1012 HVHSKSSP--VVCQMNSDRDHHPQ-----DSRKWGKLVSATLAAAVIAFSSDMSALADLN 854
            H+ S S P  VVC++   R+++ +     +S+KW +LVS  LAAAV+  S  M A+ADLN
Sbjct: 17   HLRSLSKPFTVVCRIERQRENNWRGEANAESKKWQRLVSTALAAAVVTLSPVMPAVADLN 76

Query: 853  KYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEK 674
            KYE E RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNG YLEK
Sbjct: 77   KYEVETRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGEYLEK 136

Query: 673  AVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDL 494
            AVAYKA+ TG D       +MVL+ +  T   + R  L+     G   E    S+A    
Sbjct: 137  AVAYKASLTGPDAPHARPYKMVLHPS--TGLCVLRGSLSEPLKLGPCTE----SEAWGYT 190

Query: 493  PQK------QALCKYASGTNPVTGVSTRLSLGCGNKRRN 395
            PQK        LC  A G     G   +LS+ C N   N
Sbjct: 191  PQKILIIKGTYLCLQAVG----LGKPAKLSVICSNPGSN 225


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