BLASTX nr result

ID: Glycyrrhiza23_contig00001126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00001126
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   399   e-170
dbj|BAD18438.1| unnamed protein product [Homo sapiens]                399   e-170
ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   400   e-167
ref|XP_003604065.1| DEAD-box ATP-dependent RNA helicase [Medicag...   388   e-160
ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   358   e-149

>ref|XP_003522431.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max]
          Length = 528

 Score =  399 bits (1024), Expect(2) = e-170
 Identities = 197/237 (83%), Positives = 210/237 (88%)
 Frame = -3

Query: 1121 DEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEE 942
            DEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVFPDCEMIMGPGMHRISSRL+E
Sbjct: 292  DEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGMHRISSRLQE 351

Query: 941  ILVDCSGEDGQEKTPDTAFLNKKAALLQLAGESPVPRTIVFCNKIETCRKVENALKRIDK 762
            I+VDCSGEDGQEKTPDTAFLNKK ALLQL  E+PVPRTIVFCNKIETCRKVEN LKR D+
Sbjct: 352  IIVDCSGEDGQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKVENLLKRFDR 411

Query: 761  KGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFD 582
            KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+CTDRASRGIDF  VDHVILFD
Sbjct: 412  KGNHVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFTRVDHVILFD 471

Query: 581  FPREPSEYXXXXXXXXXXXXXXGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAY 411
            FPR+PSEY              GKAFIFVVGKQVSLARKIMERN+KGHPLHDVPSAY
Sbjct: 472  FPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY 528



 Score =  227 bits (579), Expect(2) = e-170
 Identities = 115/152 (75%), Positives = 128/152 (84%)
 Frame = -2

Query: 1677 DNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIADQSGSGKTL 1498
            D  FFSL SFK+IGCS+ +++SLQ   L+RPSH+QAMAFAPV  GKTCVIADQSGSGKTL
Sbjct: 117  DTKFFSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGKTCVIADQSGSGKTL 176

Query: 1497 AYLVPXXXXXXXXXXXEGRNKSSSQAPRVVILAPTAELASQVLDNCRSMSKSGVPFKSMV 1318
            AYL P              +KSSSQAPRV++LAPTAELASQVLDNCRS+SKSGVPFKSMV
Sbjct: 177  AYLAPIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMV 236

Query: 1317 VTGGFRQRTQLENLQQGVDVLIATPGRFLFLM 1222
            VTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+
Sbjct: 237  VTGGFRQKTQLENLQQGVDVLIATPGRFLFLI 268


>dbj|BAD18438.1| unnamed protein product [Homo sapiens]
          Length = 528

 Score =  399 bits (1024), Expect(2) = e-170
 Identities = 197/237 (83%), Positives = 210/237 (88%)
 Frame = -3

Query: 1121 DEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEE 942
            DEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVFPDCEMIMGPGMHRISSRL+E
Sbjct: 292  DEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGMHRISSRLQE 351

Query: 941  ILVDCSGEDGQEKTPDTAFLNKKAALLQLAGESPVPRTIVFCNKIETCRKVENALKRIDK 762
            I+VDCSGEDGQEKTPDTAFLNKK ALLQL  E+PVPRTIVFCNKIETCRKVEN LKR D+
Sbjct: 352  IIVDCSGEDGQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKVENLLKRFDR 411

Query: 761  KGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFD 582
            KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+CTDRASRGIDF  VDHVILFD
Sbjct: 412  KGNHVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFTRVDHVILFD 471

Query: 581  FPREPSEYXXXXXXXXXXXXXXGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAY 411
            FPR+PSEY              GKAFIFVVGKQVSLARKIMERN+KGHPLHDVPSAY
Sbjct: 472  FPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY 528



 Score =  227 bits (579), Expect(2) = e-170
 Identities = 115/152 (75%), Positives = 128/152 (84%)
 Frame = -2

Query: 1677 DNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIADQSGSGKTL 1498
            D  FFSL SFK+IGCS+ +++SLQ   L+RPSH+QAMAFAPV  GKTCVIADQSGSGKTL
Sbjct: 117  DTKFFSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGKTCVIADQSGSGKTL 176

Query: 1497 AYLVPXXXXXXXXXXXEGRNKSSSQAPRVVILAPTAELASQVLDNCRSMSKSGVPFKSMV 1318
            AYL P              +KSSSQAPRV++LAPTAELASQVLDNCRS+SKSGVPFKSMV
Sbjct: 177  AYLAPIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMV 236

Query: 1317 VTGGFRQRTQLENLQQGVDVLIATPGRFLFLM 1222
            VTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+
Sbjct: 237  VTGGFRQKTQLENLQQGVDVLIATPGRFLFLI 268


>ref|XP_003526886.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Glycine max]
          Length = 530

 Score =  400 bits (1028), Expect(2) = e-167
 Identities = 199/237 (83%), Positives = 211/237 (89%)
 Frame = -3

Query: 1121 DEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEE 942
            DEDFE+ALQ LINSSPVDTQYLFVTATLP NVY+KLVEVFPDCEMIMGPGMHRISSRL+E
Sbjct: 294  DEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGMHRISSRLQE 353

Query: 941  ILVDCSGEDGQEKTPDTAFLNKKAALLQLAGESPVPRTIVFCNKIETCRKVENALKRIDK 762
            I+VDCSGEDGQEKTPDTAFLNKK ALLQL  ESPVPRTIVFCNKIETCRKVEN LKR D+
Sbjct: 354  IIVDCSGEDGQEKTPDTAFLNKKTALLQLVEESPVPRTIVFCNKIETCRKVENLLKRFDR 413

Query: 761  KGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFD 582
            KG+ +QVLPFHAAMTQESRLASM+EF R PSK +SQFM+CTDRASRGIDFA VDHVILFD
Sbjct: 414  KGNCVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFARVDHVILFD 473

Query: 581  FPREPSEYXXXXXXXXXXXXXXGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAY 411
            FPR+PSEY              GKAFIFVVGKQVSLARKIMERN+KGHPLHDVPSAY
Sbjct: 474  FPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY 530



 Score =  217 bits (553), Expect(2) = e-167
 Identities = 114/163 (69%), Positives = 128/163 (78%), Gaps = 2/163 (1%)
 Frame = -2

Query: 1704 PKSPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIA 1525
            P +    V D  FFSL SFK+IGCS+ +++SLQ    +RPSH+QAMAF PV  GKTCVIA
Sbjct: 108  PPAQSKSVSDTKFFSLKSFKEIGCSEYMIESLQKLLFSRPSHVQAMAFTPVISGKTCVIA 167

Query: 1524 DQSGSGKTLAYLVPXXXXXXXXXXXEGRNKSSSQAP--RVVILAPTAELASQVLDNCRSM 1351
            DQSGSGKT AYL P              +KSSSQAP  RV++LAPTAELASQVLDNCRS+
Sbjct: 168  DQSGSGKTFAYLAPIIQRLRQQELEGIISKSSSQAPSPRVLVLAPTAELASQVLDNCRSL 227

Query: 1350 SKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLM 1222
            SKSGVPFKSMVVTGGFRQ+TQLENLQQGVDVLIATPGRFLFL+
Sbjct: 228  SKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFLFLI 270


>ref|XP_003604065.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355493113|gb|AES74316.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 568

 Score =  388 bits (997), Expect(2) = e-160
 Identities = 193/237 (81%), Positives = 207/237 (87%)
 Frame = -3

Query: 1121 DEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEE 942
            DEDFE ALQCLI+SSPVDTQYLFVTATLP NVYSKLVEVFPDCEM+MGP MHRI+SRLEE
Sbjct: 290  DEDFEKALQCLISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEE 349

Query: 941  ILVDCSGEDGQEKTPDTAFLNKKAALLQLAGESPVPRTIVFCNKIETCRKVENALKRIDK 762
            I+VDCSGEDGQEKT DTAFLNKKAALLQLA ++ VPRTIVFCNKIETCRKVENAL R D+
Sbjct: 350  IIVDCSGEDGQEKTLDTAFLNKKAALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDR 409

Query: 761  KGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFD 582
            KG R+QVLPFHAAMTQESRLASMKEF R P K +SQFM+CTDRASRGIDF  VDHVILFD
Sbjct: 410  KGIRMQVLPFHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRVDHVILFD 469

Query: 581  FPREPSEYXXXXXXXXXXXXXXGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAY 411
            +PR+PSEY              GKAFIFVVGKQVSLARK+MERNRKGHPLHDVPS +
Sbjct: 470  YPRDPSEYVRRVGRTARGARGQGKAFIFVVGKQVSLARKVMERNRKGHPLHDVPSGH 526



 Score =  205 bits (521), Expect(2) = e-160
 Identities = 110/161 (68%), Positives = 128/161 (79%), Gaps = 1/161 (0%)
 Frame = -2

Query: 1701 KSPVLPVLDNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIAD 1522
            KS  L   D NFFSL SFK IGC+D +++SL   SLTRPS+IQAM+F PV  GK+C+IAD
Sbjct: 114  KSLALASEDTNFFSLKSFKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIAD 173

Query: 1521 QSGSGKTLAYLVPXXXXXXXXXXXEGRNKSSSQAPRVVILAPTAELASQVLDNCRSMSKS 1342
            QSGSGKTLAYLVP           +G +KSSSQ+P ++ILAPTAELASQV  NCRS+SKS
Sbjct: 174  QSGSGKTLAYLVP-IIQRLRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKS 232

Query: 1341 G-VPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLM 1222
            G VPFKSM+VTGGFRQ+TQL+ L QGVDVLIATPGRFLFL+
Sbjct: 233  GVVPFKSMLVTGGFRQKTQLDTLNQGVDVLIATPGRFLFLI 273


>ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis
            vinifera]
          Length = 707

 Score =  358 bits (920), Expect(2) = e-149
 Identities = 176/240 (73%), Positives = 203/240 (84%)
 Frame = -3

Query: 1121 DEDFEMALQCLINSSPVDTQYLFVTATLPNNVYSKLVEVFPDCEMIMGPGMHRISSRLEE 942
            DEDFE+ALQ LINSSPV  QYLFVTATLP  +Y+KLVEVFPDCE+IMGPGMHRISSRLEE
Sbjct: 467  DEDFELALQTLINSSPVTMQYLFVTATLPVGIYNKLVEVFPDCEVIMGPGMHRISSRLEE 526

Query: 941  ILVDCSGEDGQEKTPDTAFLNKKAALLQLAGESPVPRTIVFCNKIETCRKVENALKRIDK 762
            +LVDCSG+DG EKTP++AFLNKK+ALLQL   SPV RTIVFCNKIETCRKVEN LK  D+
Sbjct: 527  VLVDCSGDDGTEKTPESAFLNKKSALLQLVEGSPVSRTIVFCNKIETCRKVENVLKHFDR 586

Query: 761  KGSRIQVLPFHAAMTQESRLASMKEFARPPSKSISQFMICTDRASRGIDFAGVDHVILFD 582
            KG R++VL FHAA+TQESRLA++KEF    S+ +S F++CTDRASRGIDFA VDHV+LFD
Sbjct: 587  KGVRLRVLAFHAALTQESRLANLKEFLNSHSEGVSLFLVCTDRASRGIDFAKVDHVVLFD 646

Query: 581  FPREPSEYXXXXXXXXXXXXXXGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAYEPM 402
            FPR+PSEY              GKAF++VVGKQVSLAR+I+ERN+KGHPLH+VPSAYE M
Sbjct: 647  FPRDPSEYVRRVGRTARGAGGKGKAFVYVVGKQVSLARRIIERNKKGHPLHNVPSAYELM 706



 Score =  199 bits (505), Expect(2) = e-149
 Identities = 102/153 (66%), Positives = 120/153 (78%)
 Frame = -2

Query: 1677 DNNFFSLNSFKDIGCSDNILQSLQTQSLTRPSHIQAMAFAPVTGGKTCVIADQSGSGKTL 1498
            D++FFS  SF+D+GCSD +++SL+ Q   RPSHIQAMAFA V  GK+C+IADQSGSGKTL
Sbjct: 293  DSDFFSGKSFRDLGCSDYMIESLRGQLFVRPSHIQAMAFATVMEGKSCIIADQSGSGKTL 352

Query: 1497 AYLVPXXXXXXXXXXXEGRNKSSSQAPRVVILAPTAELASQVLDNCRSMSKSGVPFKSMV 1318
            AYL+P            G  KSS+  P+VVIL PTAELASQVL NCRS+SK G PF+SM 
Sbjct: 353  AYLLPVIQRLREEELQ-GLGKSSAGCPQVVILVPTAELASQVLSNCRSISKFGAPFRSMA 411

Query: 1317 VTGGFRQRTQLENLQQGVDVLIATPGRFLFLMK 1219
             TGGFRQRTQLENLQQ +DVLIATPGRF+FL+K
Sbjct: 412  ATGGFRQRTQLENLQQDLDVLIATPGRFMFLIK 444


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