BLASTX nr result
ID: Glycyrrhiza23_contig00001099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00001099
(2207 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 773 0.0
ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicag... 749 0.0
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 734 0.0
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 730 0.0
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 730 0.0
>ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max]
Length = 636
Score = 773 bits (1996), Expect = 0.0
Identities = 433/611 (70%), Positives = 463/611 (75%), Gaps = 2/611 (0%)
Frame = -1
Query: 1958 KRFPFSNPTTVLPPRLFRPLCSSXXXXXXXXXXXXXXXXXXEVIKHSMLLERLRVRHLKK 1779
KR P P + R FRPLCS KHS+LLERLR RHL+
Sbjct: 48 KRVPLPKPLPLF--RRFRPLCSVSAAAPEAADA-----------KHSILLERLRSRHLR- 93
Query: 1778 DNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFEELGIGGEVMGAVREMG 1599
A K P SFEELG+ EVMGAVREMG
Sbjct: 94 ---DAAKAAPEPRKKEKVAAAAAAAAAAAEAKEKKKAVA--SFEELGLSEEVMGAVREMG 148
Query: 1598 IEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQSNGILLKPRRPR 1419
IEVPTEIQ IG+PAVL+ KSVVLGSHTGSGKTLAYLLPL QLLRRDEQ NGILLKPRRPR
Sbjct: 149 IEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPR 208
Query: 1418 AVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRIL 1239
AVVLCPTREL+EQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPID+VVGTPGR+L
Sbjct: 209 AVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVL 268
Query: 1238 QHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRRASKPDGLGFQTILVTAT 1059
QHIEEGN+VYGDIKYLVLDEADTMFDRGFGPDIRKF+GPLK RASKPDGLGFQTILVTAT
Sbjct: 269 QHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTAT 328
Query: 1058 MTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSENKLEALLQVLEPSLAKGN 879
MTK VQ L+DEEF GI HLRTSTLHKKISSARHDFIKL+GSENKLEALLQVLEPSLAKGN
Sbjct: 329 MTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGN 388
Query: 878 RVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRKFKSDDEDCPTLVCTDL 699
RVMVFCNTL SSRAVDHFLGENQIS VNYHGEVPAEQRVENLRKFKSD +DCPTLVCTDL
Sbjct: 389 RVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDL 448
Query: 698 AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKRDLNLATKIEEAMR 519
AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAK+DL+LA+KIE+A+R
Sbjct: 449 AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALR 508
Query: 518 KNESLEAITKESVRSDI--TRNQITEQRRKNKNLVTIXXXXXXXXXXXXXXXXXXXXXXX 345
KNESLEAITKESVR DI T+NQ TE + K+K LV +
Sbjct: 509 KNESLEAITKESVRRDIARTQNQSTE-KGKSKRLVKVSKVMGKSGSRFGSGNNGSGMKSG 567
Query: 344 KQSPPVKPTTKKGITXXXXXXXXXXXXXXXXXXSENKQTSKRGSVTTKSTNSKLSVVGFR 165
K S PVK + KKGI +E +Q+SK S TKSTNSKL+VVGFR
Sbjct: 568 KGS-PVK-SMKKGI-QVSKSGKSSSANSLRKASTEKRQSSKMVS-ATKSTNSKLNVVGFR 623
Query: 164 GRNSPPNKKQS 132
G+NS N K+S
Sbjct: 624 GKNSSSNNKES 634
>ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503116|gb|AES84319.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 684
Score = 749 bits (1933), Expect = 0.0
Identities = 379/469 (80%), Positives = 414/469 (88%)
Frame = -1
Query: 1826 KHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFE 1647
KHS LLE+LR+RHLK + + + GSFE
Sbjct: 63 KHSFLLEKLRIRHLKGGSRNDERVV----------RKVEGVKKKKEGVDEEDGGGVGSFE 112
Query: 1646 ELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR 1467
LG+G EVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR
Sbjct: 113 GLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR 172
Query: 1466 RDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDS 1287
RDEQ NG++LKP+RPRAVVLCPTREL+EQVFRVAK+ISHHARFRCTMVSGGGRLRPQE+S
Sbjct: 173 RDEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEES 232
Query: 1286 LNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRRA 1107
L+NPIDMVVGTPGRILQHIEEGN+VYGDI+Y+VLDEADTMFDRGFGPDI+KFL PLK RA
Sbjct: 233 LSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRA 292
Query: 1106 SKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSENK 927
SKPD LGFQT+LVTATMTK VQ LVDEEFQGI HLRTS+LHKKIS+ARHDFIKLSG+ENK
Sbjct: 293 SKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENK 352
Query: 926 LEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRK 747
L++LLQVLEPSLAKGNRVMVFCNTL SSRAVDHFL ENQISTVNYHGEVPA QRVENL K
Sbjct: 353 LDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNK 412
Query: 746 FKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLV 567
FKS+++DCPTLVCTDLAARGLDLDVDHV+MFDFPLNSIDYLHRTGRTARMGAKGK+TSLV
Sbjct: 413 FKSNNDDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLV 472
Query: 566 AKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLV 420
K+D +LATKIEEA++KNE+LEAITKESVR D+TRNQITEQRRKNKN+V
Sbjct: 473 TKKDYSLATKIEEAIKKNENLEAITKESVRMDVTRNQITEQRRKNKNVV 521
>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
Length = 635
Score = 734 bits (1894), Expect = 0.0
Identities = 392/570 (68%), Positives = 432/570 (75%), Gaps = 11/570 (1%)
Frame = -1
Query: 1829 IKHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSF 1650
++HS+LLE+LR RHLK S +P SF
Sbjct: 69 MRHSILLEKLRFRHLKDSAKSPQTRSPPLSTGGKEGEPGSMKSQKKPKMVS-------SF 121
Query: 1649 EELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLL 1470
EELG+ EVM AVRE GI VPTEIQCIGVPAVL+G+SVVLGSHTGSGKTLAY+LPLVQLL
Sbjct: 122 EELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLL 181
Query: 1469 RRDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQED 1290
RRDE +G+L+KPRRPRAVVLCPTREL+EQVFRVAKSISHHARFR TMVSGGGRLRPQED
Sbjct: 182 RRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQED 241
Query: 1289 SLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRR 1110
SLN PIDMVVGTPGR+LQHIEEGN+VYG+IKYLVLDEADTMFDRGFGPDIRKFL PLK R
Sbjct: 242 SLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNR 301
Query: 1109 ASKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSEN 930
ASK D GFQT+LVTATMTK VQKL+DEEFQGI HLRTSTLHKKI+SARHDFIKLSGSEN
Sbjct: 302 ASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSEN 361
Query: 929 KLEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLR 750
KLEALLQVLEPSLAKGN+VMVFCNTL SSRAVDHFLGENQI TVNYHGEVPAEQRVENL+
Sbjct: 362 KLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLK 421
Query: 749 KFKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 570
KFK++D DCPTLVCTDLAARGLDLDVDHV+MFDFPLNSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 422 KFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 481
Query: 569 VAKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLVTIXXXXXXXX 390
VAK+DL LAT+IEEA+RKNESLEA+T +++R D+ R +I+EQ+ KN NLV +
Sbjct: 482 VAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTK 541
Query: 389 XXXXXXXXXXXXXXXKQ-----------SPPVKPTTKKGITXXXXXXXXXXXXXXXXXXS 243
SPP K I
Sbjct: 542 VESMKSSSKAASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSKSSSAGGGSKRALSGV 601
Query: 242 ENKQTSKRGSVTTKSTNSKLSVVGFRGRNS 153
+ SKR S + KS+ SKLSVVGFRGR+S
Sbjct: 602 MKRADSKRSS-SVKSSTSKLSVVGFRGRSS 630
>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 730 bits (1885), Expect = 0.0
Identities = 389/570 (68%), Positives = 437/570 (76%), Gaps = 3/570 (0%)
Frame = -1
Query: 1829 IKHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSF 1650
+KHS LLERLR RHLK+ SA KT P SF
Sbjct: 69 LKHSQLLERLRTRHLKE---SAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE---SF 122
Query: 1649 EELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLL 1470
EELG+ EVMGAVREMGI+VP+EIQCIG+PAVL+GKSV+LGSHTGSGKTLAYLLPLVQLL
Sbjct: 123 EELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLL 182
Query: 1469 RRDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQED 1290
RRDE+ G L+KPRRPRAVVLCPTREL+EQVFRV+KSISHHARFR TMVSGGGRLRPQED
Sbjct: 183 RRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQED 242
Query: 1289 SLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRR 1110
SL+NPIDMVVGTPGR+LQHIE GN+VYGDIKYLVLDEADTMFD GFGPDIRKF+GPLK R
Sbjct: 243 SLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHR 302
Query: 1109 ASKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSEN 930
AS D GFQTILVTATMTK VQKL+DEEFQGI HLRTSTLHKKI+SARHDFIKLSGSEN
Sbjct: 303 ASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSEN 362
Query: 929 KLEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLR 750
KLEALLQVLEPSLAKGNRVMVFCNTL SSRAVDHFLGENQISTVNYHGEVPA++RVENL+
Sbjct: 363 KLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLK 422
Query: 749 KFKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 570
KFKSDD DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 423 KFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSL 482
Query: 569 VAKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLV--TIXXXXXX 396
V K+D LAT+IEEA+RKNESLE++T +SV D+ RN+ITE + KN L+ +
Sbjct: 483 VGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAK 542
Query: 395 XXXXXXXXXXXXXXXXXKQSPPVKPTTKKGITXXXXXXXXXXXXXXXXXXSENKQTS-KR 219
++ + T K G++ ++ + S KR
Sbjct: 543 SATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKR 602
Query: 218 GSVTTKSTNSKLSVVGFRGRNSPPNKKQSL 129
KS+ KL+VVGFRGR++ ++S+
Sbjct: 603 PGSAIKSSGQKLNVVGFRGRSNQSGNRRSV 632
>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
sativus]
Length = 634
Score = 730 bits (1885), Expect = 0.0
Identities = 389/570 (68%), Positives = 437/570 (76%), Gaps = 3/570 (0%)
Frame = -1
Query: 1829 IKHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSF 1650
+KHS LLERLR RHLK+ SA KT P SF
Sbjct: 69 LKHSQLLERLRTRHLKE---SAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE---SF 122
Query: 1649 EELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLL 1470
EELG+ EVMGAVREMGI+VP+EIQCIG+PAVL+GKSV+LGSHTGSGKTLAYLLPLVQLL
Sbjct: 123 EELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLL 182
Query: 1469 RRDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQED 1290
RRDE+ G L+KPRRPRAVVLCPTREL+EQVFRV+KSISHHARFR TMVSGGGRLRPQED
Sbjct: 183 RRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQED 242
Query: 1289 SLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRR 1110
SL+NPIDMVVGTPGR+LQHIE GN+VYGDIKYLVLDEADTMFD GFGPDIRKF+GPLK R
Sbjct: 243 SLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHR 302
Query: 1109 ASKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSEN 930
AS D GFQTILVTATMTK VQKL+DEEFQGI HLRTSTLHKKI+SARHDFIKLSGSEN
Sbjct: 303 ASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSEN 362
Query: 929 KLEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLR 750
KLEALLQVLEPSLAKGNRVMVFCNTL SSRAVDHFLGENQISTVNYHGEVPA++RVENL+
Sbjct: 363 KLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLK 422
Query: 749 KFKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 570
KFKSDD DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 423 KFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSL 482
Query: 569 VAKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLV--TIXXXXXX 396
V K+D LAT+IEEA+RKNESLE++T +SV D+ RN+ITE + KN L+ +
Sbjct: 483 VGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSGAK 542
Query: 395 XXXXXXXXXXXXXXXXXKQSPPVKPTTKKGITXXXXXXXXXXXXXXXXXXSENKQTS-KR 219
++ + T K G++ ++ + S KR
Sbjct: 543 SATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVASRKR 602
Query: 218 GSVTTKSTNSKLSVVGFRGRNSPPNKKQSL 129
KS+ KL+VVGFRGR++ ++S+
Sbjct: 603 PGSAIKSSGQKLNVVGFRGRSNQSGNRRSV 632